| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g30064 | 1:4,844,359-4,848,296 | - | C2H1g25446 | CX1g000033 | LOC_Os01g10450 | Os01g0201200 | - | Detail |
| C1H1g16523 | 1:4,877,117-4,878,002 | - | C2H1g03634 | CX1g002271 | LOC_Os01g10480 | Os01g0201500 | - | Detail |
| C1H1g23585 | 1:4,883,309-4,883,626 | - | C2H1g24699 | CX1g003008 | LOC_Os01g10490 | Os01g0201600 | OsGAE1 | Detail |
| C1H1g14400 | 1:4,883,733-4,884,400 | - | C2H1g28525 | CX1g003008 | LOC_Os01g10490 | Os01g0201600 | OsGAE1 | Detail |
| C1H1g15606 | 1:4,893,738-4,902,428 | - | C2H1g12459 | CX1g006928 | LOC_Os01g10504 | Os01g0201700 | RAG, MADS3, OsMADS3, OsMADS3(t), RMADS222, RAG1 | Detail |
| C1H1g13227 | 1:4,913,013-4,914,395 | - | C2H1g19665 | CX1g003430 | LOC_Os01g10520 | Os01g0201800 | - | Detail |
| C1H1g22249 | 1:4,924,675-4,932,481 | - | C2H1g09694 | CX1g006334 | LOC_Os01g10530 | Os01g0201900 | - | Detail |
| C1H1g17903 | 1:4,967,422-4,968,687 | + | C2H1g26674 | CX1g001589 | LOC_Os01g10580 | Os01g0202500 | - | Detail |
| C1H1g18982 | 1:4,974,967-4,975,794 | + | C2H1g25575 | - | - | Os01g0202601 | - | Detail |
| C1H1g22813 | 1:4,981,388-4,984,579 | + | C2H1g11027 | CX1g006160 | LOC_Os01g10590 | Os01g0202700 | - | Detail |
| C1H1g30411 | 1:4,991,095-4,994,109 | - | C2H1g23331 | CX1g001315 | LOC_Os01g10600 | Os01g0202800 | OsNIP1;2 | Detail |
| C1H1g09441 | 1:4,995,564-4,997,839 | - | C2H1g21358 | CX1g005369 | LOC_Os01g10610 | Os01g0203000 | - | Detail |
| C1H1g13068 | 1:5,003,013-5,004,957 | - | C2H1g27421 | CX1g004390 | LOC_Os01g10630 | Os01g0203300 | - | Detail |
| C1H1g30796 | 1:5,043,175-5,047,575 | - | C2H1g16705 | CX1g005785 | LOC_Os01g10690 | Os01g0204000 | - | Detail |
| C1H1g01843 | 1:5,051,683-5,063,908 | - | C2H1g09104 | - | - | - | - | Detail |
| C1H1g24281 | 1:5,065,518-5,068,602 | + | C2H1g06825 | CX1g003100 | LOC_Os01g10790 | Os01g0205100 | - | Detail |
| C1H1g05818 | 1:5,070,855-5,074,344 | + | C2H1g00620 | - | - | - | - | Detail |
| C1H1g15430 | 1:5,079,327-5,082,999 | + | C2H1g06825 | CX1g003100 | LOC_Os01g10790 | Os01g0205100 | - | Detail |
| C1H1g01247 | 1:5,083,533-5,086,781 | - | C2H1g29778 | CX1g002344 | LOC_Os01g10800 | Os01g0205200 | - | Detail |
| C1H1g30346 | 1:5,087,144-5,088,059 | + | C2H1g24453 | CX1g004381 | LOC_Os01g10810 | Os01g0205300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g047984 | 7:18,553,521-18,557,290 | - | C1H7g14548 | C2H7g16795 | LOC_Os07g37740 | Os07g0564600 | - | Detail |
| CX7g049691 | 7:18,560,413-18,570,869 | - | C1H7g21741 | C2H7g08551 | LOC_Os07g37750 | Os07g0564700 | - | Detail |
| CX7g046115 | 7:18,573,884-18,578,623 | - | C1H7g14667 | C2H7g00466 | LOC_Os07g37760 | Os07g0564800 | - | Detail |
| CX7g046371 | 7:18,580,778-18,584,465 | - | C1H7g02934 | C2H7g22128 | LOC_Os07g37800 | Os07g0565300 | - | Detail |
| CX7g049526 | 7:18,586,157-18,591,004 | - | C1H7g19972 | C2H7g25505 | LOC_Os07g37810 | Os07g0565400 | - | Detail |
| CX7g046390 | 7:18,603,461-18,607,494 | + | C1H7g16856 | C2H7g03775 | LOC_Os07g37830 | Os07g0565600 | - | Detail |
| CX7g050301 | 7:18,607,732-18,608,754 | - | C1H7g17613 | C2H7g27856 | LOC_Os07g37840 | Os07g0565700 | - | Detail |
| CX7g048254 | 7:18,619,812-18,620,204 | - | - | - | - | Os07g0566150 | - | Detail |
| CX7g049991 | 7:18,626,038-18,630,124 | - | C1H7g24487 | C2H7g15291 | LOC_Os07g37890 | Os07g0566200 | - | Detail |
| CX7g047312 | 7:18,639,995-18,640,246 | - | - | - | - | - | - | Detail |
| CX7g048841 | 7:18,643,722-18,645,299 | - | C1H7g23967 | C2H7g21369 | LOC_Os07g37920 | Os07g0566500 | ONAC010 | Detail |
| CX7g048091 | 7:18,655,659-18,656,135 | + | - | - | - | - | - | Detail |
| CX7g046904 | 7:18,657,205-18,658,018 | - | C1H7g17690 | C2H7g06717 | LOC_Os07g37950 | Os07g0566800 | - | Detail |
| CX7g048618 | 7:18,660,526-18,660,945 | + | - | - | - | - | - | Detail |
| CX7g048870 | 7:18,665,268-18,668,958 | + | C1H7g28095 | C2H7g12522 | LOC_Os07g37960 | Os07g0567000 | - | Detail |
| CX7g049139 | 7:18,670,547-18,672,706 | + | C1H7g03714 | C2H7g03265 | LOC_Os07g37970 | Os07g0567100 | - | Detail |
| CX7g049564 | 7:18,675,344-18,676,041 | + | C1H7g15832 | C2H7g15772 | LOC_Os07g37980 | Os07g0567100 | - | Detail |
| CX7g049004 | 7:18,676,673-18,682,898 | - | C1H7g19298 | C2H7g06993 | LOC_Os07g37990 | Os07g0567300 | - | Detail |
| CX7g047452 | 7:18,683,658-18,684,749 | - | C1H7g12881 | C2H7g16803 | LOC_Os07g38000 | Os07g0567400 | - | Detail |
| CX7g049742 | 7:18,687,266-18,687,592 | - | C1H7g07973 | - | LOC_Os07g38010 | Os07g0567500 | - | Detail |