| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g00456 | 3:1,967,721-1,971,367 | - | C2H3g01677 | CX3g025825 | LOC_Os03g04620 | Os03g0139500 | - | Detail |
| C1H3g23782 | 3:1,976,614-1,978,122 | + | C2H3g16470 | CX3g025500 | LOC_Os03g04630 | Os03g0139600 | - | Detail |
| C1H3g00353 | 3:2,001,135-2,002,661 | + | C2H3g12777 | CX3g025500 | LOC_Os03g04650 | Os03g0140100 | - | Detail |
| C1H3g25985 | 3:2,007,851-2,009,407 | + | C2H3g27330 | CX3g025500 | LOC_Os03g04660 | Os03g0140200 | CYP96B5, WSL5 | Detail |
| C1H3g15064 | 3:2,018,583-2,020,202 | + | C2H3g29153 | CX3g025500 | LOC_Os03g04680 | Os03g0140400 | SD37, OsCYP96B4, CYP96B4, CYP96B4/SD37, OsDSS1, DSS1 | Detail |
| C1H3g14858 | 3:2,020,878-2,021,432 | - | - | - | - | - | - | Detail |
| C1H3g07260 | 3:2,022,825-2,025,230 | - | C2H3g12329 | CX3g029016 | LOC_Os03g16950 | Os03g0140500 | - | Detail |
| C1H3g31769 | 3:2,031,637-2,032,080 | - | C2H3g13203 | CX3g026380 | - | Os03g0140650 | - | Detail |
| C1H3g10738 | 3:2,034,958-2,036,214 | + | C2H3g17473 | CX3g028112 | LOC_Os03g04710 | Os03g0140700 | - | Detail |
| C1H3g01474 | 3:2,042,107-2,045,314 | + | C2H3g05277 | CX3g029285 | LOC_Os03g04740 | Os03g0140900 | - | Detail |
| C1H3g10114 | 3:2,046,069-2,047,786 | + | C2H3g19470 | CX3g030261 | LOC_Os03g04750 | Os03g0141000 | - | Detail |
| C1H3g00645 | 3:2,049,566-2,052,981 | + | C2H3g09892 | CX3g026884 | LOC_Os03g04770 | Os03g0141200 | OsBMY4 | Detail |
| C1H3g11848 | 3:2,060,939-2,063,117 | + | C2H3g24267 | CX3g024968 | LOC_Os03g04830 | Os03g0141700 | - | Detail |
| C1H3g03155 | 3:2,066,971-2,069,610 | + | C2H3g24637 | CX3g027335 | LOC_Os03g04840 | Os03g0141800 | - | Detail |
| C1H3g16077 | 3:2,077,782-2,078,738 | + | C2H3g16825 | CX3g027335 | LOC_Os03g04870 | Os03g0142200 | - | Detail |
| C1H3g31558 | 3:2,084,909-2,088,615 | + | C2H3g26010 | CX3g030528 | LOC_Os03g04890 | Os03g0142500 | - | Detail |
| C1H3g10254 | 3:2,089,471-2,090,426 | - | C2H3g05143 | CX3g030147 | LOC_Os03g04900 | Os03g0142600 | Os2R_MYB33 | Detail |
| C1H3g20384 | 3:2,100,222-2,100,713 | + | C2H5g13982 | - | - | - | - | Detail |
| C1H3g19270 | 3:2,111,362-2,118,089 | + | C2H3g20094 | CX3g030977 | LOC_Os03g04920 | Os03g0142800 | - | Detail |
| C1H3g30404 | 3:2,118,729-2,124,248 | - | C2H3g26910 | CX3g029043 | LOC_Os03g04930 | Os03g0142900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g049522 | 7:16,597,632-16,598,615 | - | C1H7g03963 | C2H7g29174 | - | Os07g0543700 | - | Detail |
| CX7g048189 | 7:16,602,935-16,605,586 | + | C1H7g28136 | C2H7g11017 | LOC_Os07g34110 | Os07g0525100 | OsCLIP | Detail |
| CX7g049834 | 7:16,625,331-16,626,626 | + | C1H7g30999 | C2H7g05417 | LOC_Os07g34260 | Os07g0526400 | - | Detail |
| CX7g049291 | 7:16,663,968-16,667,353 | + | C1H7g27469 | C2H7g23548 | LOC_Os07g34390 | Os07g0527800 | - | Detail |
| CX7g047898 | 7:16,697,854-16,700,314 | + | C1H7g02995 | C2H7g20619 | LOC_Os07g34510 | Os07g0528900 | OsSYP132 | Detail |
| CX7g049794 | 7:16,700,856-16,702,865 | - | C1H7g11672 | C2H7g28101 | LOC_Os07g34520 | Os07g0529000 | - | Detail |
| CX7g050334 | 7:16,714,375-16,715,508 | + | C1H7g10059 | C2H7g11251 | LOC_Os07g34570 | Os07g0529600 | - | Detail |
| CX7g048818 | 7:16,720,296-16,721,831 | + | C1H7g07485 | C2H7g06795 | LOC_Os07g34580 | Os07g0529700 | - | Detail |
| CX7g049553 | 7:16,724,451-16,730,147 | - | C1H7g15969 | C2H7g30607 | LOC_Os07g34589 | Os07g0529800 | Os-eIF-1, eIF-1, OseIF1 | Detail |
| CX7g048501 | 7:16,731,341-16,743,794 | - | C1H7g00103 | C2H7g19407 | LOC_Os07g34598 | Os07g0530100 | - | Detail |
| CX7g048726 | 7:16,743,980-16,745,281 | + | - | - | - | - | - | Detail |
| CX7g049222 | 7:16,756,755-16,760,717 | + | C1H7g26197 | C2H7g03791 | LOC_Os07g34640 | Os07g0530600 | - | Detail |
| CX7g049449 | 7:16,763,206-16,764,264 | - | C1H7g12884 | C2H7g27672 | LOC_Os07g34650 | Os07g0530700 | - | Detail |
| CX7g046410 | 7:16,775,111-16,776,590 | + | C1H7g11266 | C2H7g15711 | LOC_Os07g34670 | Os07g0104233 | - | Detail |
| CX7g050413 | 7:16,775,203-16,775,590 | - | - | - | - | - | - | Detail |
| CX7g048785 | 7:16,781,404-16,781,829 | - | C1H7g05476 | - | LOC_Os07g34690 | Os07g0531200 | - | Detail |
| CX7g048474 | 7:16,795,784-16,797,776 | + | C1H7g06346 | C2H7g20682 | LOC_Os07g34710 | Os07g0531400 | - | Detail |
| CX7g049917 | 7:16,799,388-16,799,909 | + | C1H7g03798 | - | LOC_Os07g34720 | Os07g0531500 | - | Detail |
| CX7g049203 | 7:16,801,570-16,805,552 | - | C1H7g26670 | C2H7g01519 | LOC_Os07g34730 | Os07g0531600 | - | Detail |
| CX7g046216 | 7:16,805,884-16,811,031 | + | C1H7g02948 | C2H7g29843 | LOC_Os07g34740 | Os07g0531700 | - | Detail |