| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g06034 | 2:28,122,284-28,125,296 | + | C1H2g10371 | - | LOC_Os02g50174 | Os02g0734600 | - | Detail |
| C2H2g03591 | 2:28,129,987-28,131,627 | + | C1H2g11288 | - | LOC_Os02g50174 | Os02g0734600 | - | Detail |
| C2H2g11973 | 2:28,131,685-28,131,928 | + | - | - | - | - | - | Detail |
| C2H2g15749 | 2:28,133,825-28,134,655 | + | C1H2g29638 | CX2g023319 | LOC_Os02g50200 | Os02g0734800 | - | Detail |
| C2H2g13766 | 2:28,137,100-28,137,498 | + | - | - | LOC_Os02g50210 | Os02g0734900 | - | Detail |
| C2H2g24372 | 2:28,139,654-28,141,467 | + | C1H2g02030 | CX2g022067 | LOC_Os02g50220 | Os02g0735100 | - | Detail |
| C2H2g15743 | 2:28,145,048-28,148,684 | + | C1H2g29553 | CX2g022006 | LOC_Os02g50230 | Os02g0735100 | - | Detail |
| C2H2g04098 | 2:28,150,617-28,154,357 | - | C1H2g01228 | CX2g020555 | LOC_Os02g50240 | Os02g0735200 | - | Detail |
| C2H2g05950 | 2:28,163,367-28,164,218 | + | C1H2g08659 | CX2g023037 | LOC_Os02g50250 | - | - | Detail |
| C2H2g09760 | 2:28,166,241-28,169,353 | + | C1H2g20929 | CX2g023940 | - | - | - | Detail |
| C2H2g19052 | 2:28,171,144-28,171,992 | + | C1H2g08659 | CX2g024168 | LOC_Os02g50250 | - | - | Detail |
| C2H2g13627 | 2:28,173,614-28,176,698 | + | C1H2g07791 | CX2g019816 | LOC_Os02g50270 | Os02g0735700 | - | Detail |
| C2H2g15470 | 2:28,177,406-28,179,337 | + | C1H2g05849 | CX2g019477 | LOC_Os02g50280 | Os02g0735800 | - | Detail |
| C2H2g10624 | 2:28,180,688-28,182,752 | - | C1H2g22855 | CX2g023040 | LOC_Os02g50290 | Os02g0735900 | - | Detail |
| C2H2g27320 | 2:28,194,605-28,199,858 | + | C1H2g03349 | CX2g019949 | LOC_Os02g50320 | Os02g0736100 | - | Detail |
| C2H2g10188 | 2:28,203,195-28,211,380 | + | C1H2g05522 | CX2g021853 | LOC_Os02g50330 | Os02g0736200 | RDR1, OsRDR1 | Detail |
| C2H2g27537 | 2:28,211,359-28,217,828 | - | C1H2g23012 | CX2g019081 | LOC_Os02g50340 | Os02g0736300 | - | Detail |
| C2H2g19993 | 2:28,219,241-28,223,033 | - | C1H2g06623 | CX2g021694 | LOC_Os02g50350 | Os02g0736400 | OsDHODH1 | Detail |
| C2H2g07436 | 2:28,224,254-28,230,148 | - | C1H2g07187 | CX2g020413 | LOC_Os02g50360 | Os02g0736500 | - | Detail |
| C2H2g04852 | 2:28,230,066-28,236,442 | + | C1H2g10005 | CX2g023479 | LOC_Os02g50370 | Os02g0736600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g049429 | 7:16,183,492-16,185,039 | + | C1H7g14179 | C2H7g24692 | LOC_Os07g33410 | Os07g0517800 | - | Detail |
| CX7g049756 | 7:16,187,147-16,188,592 | - | C1H7g03637 | C2H7g06826 | LOC_Os07g33390 | Os07g0517800 | - | Detail |
| CX7g047148 | 7:16,197,884-16,199,455 | - | C1H7g14179 | C2H7g15905 | LOC_Os07g33390 | Os07g0517800 | - | Detail |
| CX7g047977 | 7:16,201,705-16,202,529 | - | - | - | LOC_Os07g30270 | Os07g0486300 | - | Detail |
| CX7g047337 | 7:16,218,358-16,220,190 | - | C1H7g05170 | C2H7g26114 | LOC_Os07g33420 | Os07g0517900 | - | Detail |
| CX7g047305 | 7:16,273,128-16,278,853 | - | C1H7g04488 | C2H7g21473 | LOC_Os07g33630 | Os07g0520400 | - | Detail |
| CX7g046350 | 7:16,286,054-16,286,203 | + | - | - | - | - | - | Detail |
| CX7g050007 | 7:16,291,611-16,292,168 | + | C1H7g21133 | C2H7g11394 | LOC_Os07g33650 | Os07g0520600 | - | Detail |
| CX7g047881 | 7:16,296,096-16,297,473 | + | C1H7g11660 | C2H7g28390 | LOC_Os07g33660 | Os07g0520800 | - | Detail |
| CX7g048773 | 7:16,298,158-16,305,592 | - | C1H7g12953 | C2H7g15083 | LOC_Os07g33670 | Os07g0520900 | - | Detail |
| CX7g049903 | 7:16,311,768-16,312,058 | + | C1H7g29152 | C2H7g02910 | LOC_Os07g33680 | Os07g0521000 | - | Detail |
| CX7g049704 | 7:16,313,190-16,317,898 | - | C1H7g10980 | C2H7g21898 | LOC_Os07g33690 | Os07g0521100 | - | Detail |
| CX7g047073 | 7:16,328,736-16,330,958 | + | C1H7g23675 | C2H7g03885 | LOC_Os07g33740 | Os07g0521800 | - | Detail |
| CX7g050381 | 7:16,352,317-16,352,649 | + | C1H7g03963 | C2H7g29174 | - | Os07g0543700 | - | Detail |
| CX7g050306 | 7:16,357,599-16,368,166 | + | C1H7g00552 | C2H7g24068 | LOC_Os07g33780 | Os07g0522500 | OsABCG43, PDR5, OsABCG43/PDR5 | Detail |
| CX7g048983 | 7:16,371,168-16,374,845 | + | C1H7g27726 | C2H7g04624 | LOC_Os07g33790 | Os07g0522600 | - | Detail |
| CX7g047567 | 7:16,380,151-16,380,303 | + | - | - | - | Os09g0414600 | - | Detail |
| CX7g046173 | 7:16,390,855-16,393,766 | + | C1H7g19851 | C2H7g03065 | LOC_Os07g33850 | Os07g0522900 | - | Detail |
| CX7g046741 | 7:16,402,435-16,403,465 | - | C1H7g29104 | C2H7g28404 | - | Os07g0419300 | - | Detail |
| CX7g049866 | 7:16,407,477-16,408,904 | + | C1H7g18037 | C2H7g11079 | LOC_Os07g26740 | Os07g0523700 | - | Detail |