| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g04603 | 1:5,989,600-5,994,298 | - | C2H1g00939 | - | - | - | - | Detail |
| C1H1g10595 | 1:6,040,587-6,043,241 | - | C2H1g17446 | CX1g003329 | LOC_Os01g12460 | Os01g0224200 | - | Detail |
| C1H1g28759 | 1:6,043,736-6,045,126 | + | C2H1g06705 | CX1g007058 | LOC_Os01g12464 | Os01g0224300 | - | Detail |
| C1H1g07004 | 1:6,046,920-6,049,789 | + | C2H1g14688 | CX1g001394 | LOC_Os01g12470 | Os01g0224400 | - | Detail |
| C1H1g12177 | 1:6,051,552-6,053,195 | - | C2H1g11914 | CX1g003539 | LOC_Os01g12480 | Os01g0224500 | - | Detail |
| C1H1g07815 | 1:6,068,874-6,071,925 | + | C2H1g03625 | CX1g002397 | LOC_Os01g12490 | Os01g0224700 | YUCCA4, OsYUCCA4, OsYUC4, YUC4 | Detail |
| C1H1g11599 | 1:6,093,803-6,095,860 | - | C2H1g01358 | CX1g005063 | LOC_Os01g12520 | Os01g0225000 | - | Detail |
| C1H1g06137 | 1:6,103,875-6,111,085 | + | C2H1g06869 | CX1g001955 | LOC_Os01g12530 | Os01g0225100 | - | Detail |
| C1H1g01658 | 1:6,112,431-6,119,238 | + | C2H1g08071 | CX1g004081 | LOC_Os01g12540 | Os01g0225200 | - | Detail |
| C1H1g10876 | 1:6,119,514-6,123,943 | + | C2H1g21338 | CX1g000643 | LOC_Os01g12550 | Os01g0225300 | - | Detail |
| C1H1g09440 | 1:6,125,263-6,127,401 | - | C2H1g20462 | CX1g000722 | LOC_Os01g12560 | Os01g0225400 | - | Detail |
| C1H1g18546 | 1:6,128,365-6,130,365 | - | C2H1g08221 | CX1g001058 | LOC_Os01g12570 | Os01g0225500 | - | Detail |
| C1H1g06023 | 1:6,184,979-6,187,554 | + | C2H1g26314 | CX1g004850 | LOC_Os01g12650 | Os01g0226300 | - | Detail |
| C1H1g23194 | 1:6,188,433-6,193,837 | - | C2H1g13868 | CX1g002355 | LOC_Os01g12660 | Os01g0226400 | - | Detail |
| C1H1g24866 | 1:6,196,677-6,202,642 | + | C2H1g02547 | CX1g000068 | LOC_Os01g12670 | Os01g0226500 | - | Detail |
| C1H1g15047 | 1:6,208,060-6,210,523 | + | C2H1g29977 | CX1g004471 | LOC_Os01g12680 | Os01g0226600 | - | Detail |
| C1H1g31834 | 1:6,225,761-6,226,951 | + | C2H1g09030 | CX1g004458 | LOC_Os01g12690 | Os01g0226700 | - | Detail |
| C1H1g16770 | 1:6,242,041-6,248,766 | + | C2H1g01170 | CX1g003495 | LOC_Os01g12710 | Os01g0227100 | - | Detail |
| C1H1g09261 | 1:6,249,653-6,250,603 | + | C2H1g01170 | CX1g003495 | LOC_Os01g15700 | Os01g0527900 | - | Detail |
| C1H1g17285 | 1:6,261,105-6,265,913 | + | C2H1g13949 | CX1g000717 | LOC_Os01g12720 | Os01g0227200 | OsPERK1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g049429 | 7:16,183,492-16,185,039 | + | C1H7g14179 | C2H7g24692 | LOC_Os07g33410 | Os07g0517800 | - | Detail |
| CX7g049756 | 7:16,187,147-16,188,592 | - | C1H7g03637 | C2H7g06826 | LOC_Os07g33390 | Os07g0517800 | - | Detail |
| CX7g047148 | 7:16,197,884-16,199,455 | - | C1H7g14179 | C2H7g15905 | LOC_Os07g33390 | Os07g0517800 | - | Detail |
| CX7g047977 | 7:16,201,705-16,202,529 | - | - | - | LOC_Os07g30270 | Os07g0486300 | - | Detail |
| CX7g047337 | 7:16,218,358-16,220,190 | - | C1H7g05170 | C2H7g26114 | LOC_Os07g33420 | Os07g0517900 | - | Detail |
| CX7g047305 | 7:16,273,128-16,278,853 | - | C1H7g04488 | C2H7g21473 | LOC_Os07g33630 | Os07g0520400 | - | Detail |
| CX7g046350 | 7:16,286,054-16,286,203 | + | - | - | - | - | - | Detail |
| CX7g050007 | 7:16,291,611-16,292,168 | + | C1H7g21133 | C2H7g11394 | LOC_Os07g33650 | Os07g0520600 | - | Detail |
| CX7g047881 | 7:16,296,096-16,297,473 | + | C1H7g11660 | C2H7g28390 | LOC_Os07g33660 | Os07g0520800 | - | Detail |
| CX7g048773 | 7:16,298,158-16,305,592 | - | C1H7g12953 | C2H7g15083 | LOC_Os07g33670 | Os07g0520900 | - | Detail |
| CX7g049903 | 7:16,311,768-16,312,058 | + | C1H7g29152 | C2H7g02910 | LOC_Os07g33680 | Os07g0521000 | - | Detail |
| CX7g049704 | 7:16,313,190-16,317,898 | - | C1H7g10980 | C2H7g21898 | LOC_Os07g33690 | Os07g0521100 | - | Detail |
| CX7g047073 | 7:16,328,736-16,330,958 | + | C1H7g23675 | C2H7g03885 | LOC_Os07g33740 | Os07g0521800 | - | Detail |
| CX7g050381 | 7:16,352,317-16,352,649 | + | C1H7g03963 | C2H7g29174 | - | Os07g0543700 | - | Detail |
| CX7g050306 | 7:16,357,599-16,368,166 | + | C1H7g00552 | C2H7g24068 | LOC_Os07g33780 | Os07g0522500 | OsABCG43, PDR5, OsABCG43/PDR5 | Detail |
| CX7g048983 | 7:16,371,168-16,374,845 | + | C1H7g27726 | C2H7g04624 | LOC_Os07g33790 | Os07g0522600 | - | Detail |
| CX7g047567 | 7:16,380,151-16,380,303 | + | - | - | - | Os09g0414600 | - | Detail |
| CX7g046173 | 7:16,390,855-16,393,766 | + | C1H7g19851 | C2H7g03065 | LOC_Os07g33850 | Os07g0522900 | - | Detail |
| CX7g046741 | 7:16,402,435-16,403,465 | - | C1H7g29104 | C2H7g28404 | - | Os07g0419300 | - | Detail |
| CX7g049866 | 7:16,407,477-16,408,904 | + | C1H7g18037 | C2H7g11079 | LOC_Os07g26740 | Os07g0523700 | - | Detail |