| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g13167 | 1:2,534,221-2,537,189 | - | C2H1g19953 | CX1g005300 | LOC_Os01g06290 | Os01g0155600 | - | Detail |
| C1H1g29973 | 1:2,540,345-2,541,048 | + | C2H1g24093 | CX1g007242 | LOC_Os01g06310 | Os01g0155800 | - | Detail |
| C1H1g13454 | 1:2,543,037-2,544,644 | - | C2H1g22515 | CX1g007185 | LOC_Os01g06320 | Os01g0156000 | - | Detail |
| C1H1g30554 | 1:2,548,124-2,548,687 | - | C2H1g04001 | - | LOC_Os01g06350 | Os01g0156300 | PBI1 | Detail |
| C1H1g25315 | 1:2,558,476-2,559,045 | - | C2H1g04001 | - | LOC_Os01g06390 | Os01g0156300 | PBI1 | Detail |
| C1H1g06191 | 1:2,566,229-2,566,930 | + | C2H1g13739 | CX1g005459 | LOC_Os01g06450 | Os01g0157700 | OsGT43D | Detail |
| C1H1g08756 | 1:2,567,199-2,568,785 | - | C2H1g20509 | CX1g003933 | LOC_Os01g06454 | Os01g0157800 | - | Detail |
| C1H1g28779 | 1:2,570,136-2,572,226 | + | C2H1g01428 | CX1g005952 | LOC_Os01g06460 | Os01g0157900 | - | Detail |
| C1H1g22633 | 1:2,572,825-2,577,683 | + | C2H1g03652 | CX1g006260 | LOC_Os01g06470 | Os01g0158000 | - | Detail |
| C1H1g19862 | 1:2,580,028-2,582,660 | + | C2H1g08414 | CX1g001022 | LOC_Os01g06490 | Os01g0158200 | - | Detail |
| C1H1g26742 | 1:2,586,938-2,587,883 | - | C2H1g03967 | CX1g003666 | LOC_Os01g06500 | Os01g0158400 | - | Detail |
| C1H1g07220 | 1:2,589,592-2,596,025 | + | C2H1g25638 | CX1g000174 | LOC_Os01g06510 | Os01g0158500 | - | Detail |
| C1H1g15639 | 1:2,596,947-2,597,756 | + | - | - | - | - | - | Detail |
| C1H1g12071 | 1:2,611,969-2,612,655 | - | C2H1g17033 | CX1g004323 | LOC_Os01g06540 | Os01g0158800 | - | Detail |
| C1H1g18412 | 1:2,613,791-2,619,259 | - | C2H1g28220 | CX1g003560 | LOC_Os01g06550 | Os01g0158900 | - | Detail |
| C1H1g02740 | 1:2,620,090-2,621,374 | - | C2H1g07454 | CX1g003324 | LOC_Os01g06560 | Os01g0159000 | OsDOG1L-1 | Detail |
| C1H1g05985 | 1:2,625,157-2,625,696 | + | - | - | - | - | - | Detail |
| C1H1g02418 | 1:2,627,867-2,629,309 | - | C2H1g08729 | CX1g003405 | LOC_Os01g06590 | Os01g0159300 | - | Detail |
| C1H1g01252 | 1:2,635,794-2,646,716 | - | C2H1g06991 | CX1g003155 | LOC_Os01g06600 | Os01g0159400 | - | Detail |
| C1H1g21645 | 1:2,649,567-2,649,950 | - | C2H1g28217 | CX1g001170 | LOC_Os01g06630 | Os01g0159600 | OsLEA1a | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g049429 | 7:16,183,492-16,185,039 | + | C1H7g14179 | C2H7g24692 | LOC_Os07g33410 | Os07g0517800 | - | Detail |
| CX7g049756 | 7:16,187,147-16,188,592 | - | C1H7g03637 | C2H7g06826 | LOC_Os07g33390 | Os07g0517800 | - | Detail |
| CX7g047148 | 7:16,197,884-16,199,455 | - | C1H7g14179 | C2H7g15905 | LOC_Os07g33390 | Os07g0517800 | - | Detail |
| CX7g047977 | 7:16,201,705-16,202,529 | - | - | - | LOC_Os07g30270 | Os07g0486300 | - | Detail |
| CX7g047337 | 7:16,218,358-16,220,190 | - | C1H7g05170 | C2H7g26114 | LOC_Os07g33420 | Os07g0517900 | - | Detail |
| CX7g047305 | 7:16,273,128-16,278,853 | - | C1H7g04488 | C2H7g21473 | LOC_Os07g33630 | Os07g0520400 | - | Detail |
| CX7g046350 | 7:16,286,054-16,286,203 | + | - | - | - | - | - | Detail |
| CX7g050007 | 7:16,291,611-16,292,168 | + | C1H7g21133 | C2H7g11394 | LOC_Os07g33650 | Os07g0520600 | - | Detail |
| CX7g047881 | 7:16,296,096-16,297,473 | + | C1H7g11660 | C2H7g28390 | LOC_Os07g33660 | Os07g0520800 | - | Detail |
| CX7g048773 | 7:16,298,158-16,305,592 | - | C1H7g12953 | C2H7g15083 | LOC_Os07g33670 | Os07g0520900 | - | Detail |
| CX7g049903 | 7:16,311,768-16,312,058 | + | C1H7g29152 | C2H7g02910 | LOC_Os07g33680 | Os07g0521000 | - | Detail |
| CX7g049704 | 7:16,313,190-16,317,898 | - | C1H7g10980 | C2H7g21898 | LOC_Os07g33690 | Os07g0521100 | - | Detail |
| CX7g047073 | 7:16,328,736-16,330,958 | + | C1H7g23675 | C2H7g03885 | LOC_Os07g33740 | Os07g0521800 | - | Detail |
| CX7g050381 | 7:16,352,317-16,352,649 | + | C1H7g03963 | C2H7g29174 | - | Os07g0543700 | - | Detail |
| CX7g050306 | 7:16,357,599-16,368,166 | + | C1H7g00552 | C2H7g24068 | LOC_Os07g33780 | Os07g0522500 | OsABCG43, PDR5, OsABCG43/PDR5 | Detail |
| CX7g048983 | 7:16,371,168-16,374,845 | + | C1H7g27726 | C2H7g04624 | LOC_Os07g33790 | Os07g0522600 | - | Detail |
| CX7g047567 | 7:16,380,151-16,380,303 | + | - | - | - | Os09g0414600 | - | Detail |
| CX7g046173 | 7:16,390,855-16,393,766 | + | C1H7g19851 | C2H7g03065 | LOC_Os07g33850 | Os07g0522900 | - | Detail |
| CX7g046741 | 7:16,402,435-16,403,465 | - | C1H7g29104 | C2H7g28404 | - | Os07g0419300 | - | Detail |
| CX7g049866 | 7:16,407,477-16,408,904 | + | C1H7g18037 | C2H7g11079 | LOC_Os07g26740 | Os07g0523700 | - | Detail |