| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g12443 | 3:5,464,485-5,475,655 | - | C1H3g16227 | CX3g029221 | LOC_Os03g11734 | Os03g0216700 | OsFRDL1 | Detail |
| C2H3g18755 | 3:5,482,141-5,484,964 | + | C1H3g24567 | CX3g029021 | LOC_Os03g11760 | Os03g0216800 | - | Detail |
| C2H3g21216 | 3:5,489,324-5,493,700 | + | C1H3g18611 | CX3g025795 | LOC_Os03g11770 | Os03g0216900 | - | Detail |
| C2H3g13077 | 3:5,494,224-5,494,622 | - | C1H3g15471 | CX3g025145 | LOC_Os03g11780 | Os03g0217000 | - | Detail |
| C2H3g17874 | 3:5,498,744-5,504,625 | + | C1H3g25970 | CX3g026533 | LOC_Os03g11890 | Os03g0218300 | - | Detail |
| C2H3g10730 | 3:5,505,014-5,509,299 | - | C1H3g04450 | CX3g031320 | LOC_Os03g11900 | Os03g0218400 | OsMST4 | Detail |
| C2H3g22152 | 3:5,514,907-5,518,091 | - | C1H3g10632 | CX3g030309 | LOC_Os03g11910 | Os03g0218500 | - | Detail |
| C2H3g13924 | 3:5,534,286-5,537,026 | + | C1H3g06308 | CX3g025032 | LOC_Os03g11950 | Os03g0219100 | OsSec14-26 | Detail |
| C2H3g24481 | 3:5,540,547-5,543,282 | - | C1H3g24825 | CX3g027163 | LOC_Os03g11960 | Os03g0219200 | OsCSD3 | Detail |
| C2H3g03285 | 3:5,543,764-5,547,541 | - | C1H3g11590 | CX3g028374 | LOC_Os03g11970 | Os03g0219300 | - | Detail |
| C2H3g25818 | 3:5,548,401-5,551,001 | - | C1H3g20877 | CX3g028318 | LOC_Os03g11980 | Os03g0219400 | - | Detail |
| C2H3g26156 | 3:5,552,006-5,552,314 | + | C1H3g14036 | CX3g029685 | LOC_Os03g11990 | Os03g0219500 | - | Detail |
| C2H3g18310 | 3:5,554,652-5,557,006 | - | C1H3g26472 | CX3g028368 | LOC_Os03g12000 | Os03g0219700 | - | Detail |
| C2H3g00756 | 3:5,559,765-5,561,920 | + | C1H3g15777 | CX3g026437 | LOC_Os03g12010 | - | - | Detail |
| C2H3g05450 | 3:5,564,233-5,566,402 | + | C1H3g13535 | CX3g028610 | LOC_Os03g12020 | Os03g0219900 | - | Detail |
| C2H3g23972 | 3:5,571,435-5,573,474 | - | C1H3g10915 | CX3g026270 | LOC_Os03g12030 | Os03g0220100 | WSL4, CER6/CUT1, CER6, CUT1, OsCER6 | Detail |
| C2H3g23561 | 3:5,594,270-5,597,015 | + | C1H3g01618 | CX3g025137 | LOC_Os03g12110 | Os03g0221200 | - | Detail |
| C2H3g25327 | 3:5,597,584-5,605,170 | - | C1H3g06610 | CX3g025281 | LOC_Os03g12120 | Os03g0221300 | - | Detail |
| C2H3g25299 | 3:5,608,099-5,612,075 | + | C1H3g09947 | CX3g028100 | LOC_Os03g12140 | Os03g0221500 | - | Detail |
| C2H3g19033 | 3:5,615,133-5,617,670 | + | C1H3g29297 | CX3g026372 | LOC_Os03g12150 | Os03g0221700 | SDRLK-9 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001354 | 1:27,149,398-27,153,428 | - | C1H1g29225 | C2H1g21067 | LOC_Os01g52790 | Os01g0728300 | - | Detail |
| CX1g001403 | 1:27,157,889-27,158,738 | - | C1H1g27738 | C2H1g25878 | LOC_Os01g52830 | Os01g0728700 | - | Detail |
| CX1g004662 | 1:27,162,689-27,166,095 | + | C1H1g16764 | C2H1g00719 | LOC_Os01g52864 | Os01g0729100 | - | Detail |
| CX1g002045 | 1:27,167,408-27,168,772 | + | C1H1g19788 | C2H1g23554 | LOC_Os01g52880 | Os01g0729400 | - | Detail |
| CX1g001938 | 1:27,174,103-27,176,046 | - | C1H1g29198 | C2H1g01846 | LOC_Os01g52900 | Os01g0729600 | - | Detail |
| CX1g001715 | 1:27,184,430-27,185,137 | + | - | - | - | - | - | Detail |
| CX1g000225 | 1:27,186,515-27,187,061 | + | C1H1g12568 | C2H1g05129 | LOC_Os01g52630 | Os01g0725600 | - | Detail |
| CX1g002816 | 1:27,195,822-27,199,370 | + | C1H1g12193 | C2H1g03641 | LOC_Os01g52920 | Os01g0729900 | - | Detail |
| CX1g003999 | 1:27,200,466-27,201,258 | + | - | C2H1g16868 | LOC_Os01g52960 | - | - | Detail |
| CX1g001631 | 1:27,201,817-27,203,404 | - | C1H1g12702 | C2H1g19584 | LOC_Os01g52970 | Os01g0730100 | - | Detail |
| CX1g000876 | 1:27,206,020-27,207,832 | - | C1H1g06718 | C2H1g18512 | LOC_Os01g52980 | Os01g0730200 | - | Detail |
| CX1g004752 | 1:27,213,632-27,217,545 | + | C1H1g07765 | C2H1g28261 | LOC_Os01g53000 | Os01g0730300 | - | Detail |
| CX1g003941 | 1:27,220,027-27,220,329 | - | - | - | LOC_Os01g53010 | Os01g0730400 | - | Detail |
| CX1g000426 | 1:27,224,003-27,226,214 | + | C1H1g14431 | C2H1g16061 | LOC_Os01g53020 | Os01g0730500 | - | Detail |
| CX1g000294 | 1:27,226,693-27,227,307 | - | C1H1g06535 | C2H1g14164 | LOC_Os01g53030 | Os01g0730600 | - | Detail |
| CX1g001404 | 1:27,235,960-27,237,057 | - | C1H1g09914 | C2H1g00487 | LOC_Os01g53040 | Os01g0730700 | OsWRKY14 | Detail |
| CX1g000168 | 1:27,240,158-27,241,785 | + | C1H1g06745 | C2H1g11513 | LOC_Os01g53060 | Os01g0730800 | - | Detail |
| CX1g001666 | 1:27,243,722-27,248,633 | - | C1H1g24583 | C2H1g14311 | LOC_Os01g53070 | Os01g0730900 | - | Detail |
| CX1g001800 | 1:27,253,997-27,259,429 | - | C1H1g26539 | C2H1g06139 | LOC_Os01g53079 | Os01g0731000 | - | Detail |
| CX1g003452 | 1:27,264,038-27,265,121 | - | - | - | - | Os01g0731600 | - | Detail |