| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g06828 | 3:2,212,313-2,215,256 | + | C1H3g08260 | CX3g030037 | LOC_Os03g05270 | Os03g0145900 | - | Detail |
| C2H3g21623 | 3:2,216,705-2,217,630 | - | C1H3g20268 | CX3g028017 | - | - | - | Detail |
| C2H3g05886 | 3:2,217,855-2,222,882 | + | C1H3g29909 | CX3g029228 | LOC_Os03g05280 | Os03g0146000 | - | Detail |
| C2H3g28085 | 3:2,226,825-2,228,647 | - | C1H3g25012 | CX3g029808 | LOC_Os03g05290 | Os03g0146100 | - | Detail |
| C2H3g09242 | 3:2,234,286-2,234,757 | + | C1H3g19868 | CX3g025472 | LOC_Os03g05300 | Os03g0146300 | - | Detail |
| C2H3g13895 | 3:2,238,644-2,242,941 | + | C1H3g27335 | CX3g025739 | LOC_Os03g05310 | Os03g0146400 | - | Detail |
| C2H3g14044 | 3:2,245,615-2,245,935 | + | C1H3g02545 | CX3g026084 | - | - | - | Detail |
| C2H3g11885 | 3:2,245,944-2,248,740 | + | C1H3g29062 | CX3g026084 | LOC_Os03g05320 | Os03g0146500 | - | Detail |
| C2H3g15286 | 3:2,248,961-2,270,805 | + | C1H3g17015 | CX3g025922 | LOC_Os03g05330 | Os03g0146600 | - | Detail |
| C2H3g18202 | 3:2,288,713-2,299,155 | - | C1H3g30836 | CX3g029888 | LOC_Os03g05390 | Os03g0147400 | - | Detail |
| C2H3g23117 | 3:2,308,929-2,313,905 | - | C1H3g06760 | CX3g025434 | LOC_Os03g05420 | Os03g0147700 | - | Detail |
| C2H3g11846 | 3:2,314,623-2,316,895 | + | C1H3g11420 | CX3g028095 | LOC_Os03g05430 | Os03g0147900 | - | Detail |
| C2H3g18230 | 3:2,317,489-2,318,731 | - | C1H3g01679 | CX3g027224 | LOC_Os03g05440 | Os03g0148000 | - | Detail |
| C2H3g10578 | 3:2,323,802-2,324,729 | - | C1H3g05732 | CX3g025933 | LOC_Os03g05450 | Os03g0148300 | - | Detail |
| C2H3g08315 | 3:2,327,349-2,328,680 | - | C1H3g20087 | CX3g026676 | LOC_Os03g05460 | Os03g0148400 | - | Detail |
| C2H3g07329 | 3:2,334,599-2,338,463 | + | C1H3g24625 | CX3g026748 | LOC_Os03g05470 | Os03g0148700 | - | Detail |
| C2H3g09418 | 3:2,341,352-2,344,058 | - | C1H3g03956 | CX3g025264 | LOC_Os03g05480 | Os03g0148800 | - | Detail |
| C2H3g30161 | 3:2,358,159-2,358,798 | + | C1H3g20130 | CX3g031194 | LOC_Os03g05500 | Os03g0149000 | - | Detail |
| C2H3g15126 | 3:2,361,784-2,363,363 | - | C1H3g20743 | CX3g024956 | LOC_Os03g05510 | Os03g0149100 | CRL1, crl1, crl1*, ARL1, ARL1/CRL1 | Detail |
| C2H3g27191 | 3:2,374,900-2,378,018 | - | C1H3g13230 | CX3g027575 | LOC_Os03g05520 | Os03g0149200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001354 | 1:27,149,398-27,153,428 | - | C1H1g29225 | C2H1g21067 | LOC_Os01g52790 | Os01g0728300 | - | Detail |
| CX1g001403 | 1:27,157,889-27,158,738 | - | C1H1g27738 | C2H1g25878 | LOC_Os01g52830 | Os01g0728700 | - | Detail |
| CX1g004662 | 1:27,162,689-27,166,095 | + | C1H1g16764 | C2H1g00719 | LOC_Os01g52864 | Os01g0729100 | - | Detail |
| CX1g002045 | 1:27,167,408-27,168,772 | + | C1H1g19788 | C2H1g23554 | LOC_Os01g52880 | Os01g0729400 | - | Detail |
| CX1g001938 | 1:27,174,103-27,176,046 | - | C1H1g29198 | C2H1g01846 | LOC_Os01g52900 | Os01g0729600 | - | Detail |
| CX1g001715 | 1:27,184,430-27,185,137 | + | - | - | - | - | - | Detail |
| CX1g000225 | 1:27,186,515-27,187,061 | + | C1H1g12568 | C2H1g05129 | LOC_Os01g52630 | Os01g0725600 | - | Detail |
| CX1g002816 | 1:27,195,822-27,199,370 | + | C1H1g12193 | C2H1g03641 | LOC_Os01g52920 | Os01g0729900 | - | Detail |
| CX1g003999 | 1:27,200,466-27,201,258 | + | - | C2H1g16868 | LOC_Os01g52960 | - | - | Detail |
| CX1g001631 | 1:27,201,817-27,203,404 | - | C1H1g12702 | C2H1g19584 | LOC_Os01g52970 | Os01g0730100 | - | Detail |
| CX1g000876 | 1:27,206,020-27,207,832 | - | C1H1g06718 | C2H1g18512 | LOC_Os01g52980 | Os01g0730200 | - | Detail |
| CX1g004752 | 1:27,213,632-27,217,545 | + | C1H1g07765 | C2H1g28261 | LOC_Os01g53000 | Os01g0730300 | - | Detail |
| CX1g003941 | 1:27,220,027-27,220,329 | - | - | - | LOC_Os01g53010 | Os01g0730400 | - | Detail |
| CX1g000426 | 1:27,224,003-27,226,214 | + | C1H1g14431 | C2H1g16061 | LOC_Os01g53020 | Os01g0730500 | - | Detail |
| CX1g000294 | 1:27,226,693-27,227,307 | - | C1H1g06535 | C2H1g14164 | LOC_Os01g53030 | Os01g0730600 | - | Detail |
| CX1g001404 | 1:27,235,960-27,237,057 | - | C1H1g09914 | C2H1g00487 | LOC_Os01g53040 | Os01g0730700 | OsWRKY14 | Detail |
| CX1g000168 | 1:27,240,158-27,241,785 | + | C1H1g06745 | C2H1g11513 | LOC_Os01g53060 | Os01g0730800 | - | Detail |
| CX1g001666 | 1:27,243,722-27,248,633 | - | C1H1g24583 | C2H1g14311 | LOC_Os01g53070 | Os01g0730900 | - | Detail |
| CX1g001800 | 1:27,253,997-27,259,429 | - | C1H1g26539 | C2H1g06139 | LOC_Os01g53079 | Os01g0731000 | - | Detail |
| CX1g003452 | 1:27,264,038-27,265,121 | - | - | - | - | Os01g0731600 | - | Detail |