| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g08740 | 4:5,837,219-5,840,950 | + | C1H4g27268 | CX4g033727 | LOC_Os04g11760 | Os04g0193950 | - | Detail |
| C2H4g24115 | 4:5,863,103-5,863,795 | + | C1H4g00127 | CX4g034119 | - | - | - | Detail |
| C2H4g01433 | 4:5,877,746-5,884,336 | - | C1H4g11202 | CX4g032821 | LOC_Os04g11820 | Os04g0194500 | - | Detail |
| C2H4g23993 | 4:5,907,269-5,914,707 | + | C1H4g19431 | CX4g034386 | LOC_Os04g11880 | Os04g0195000 | - | Detail |
| C2H4g11331 | 4:5,933,106-5,934,673 | + | C1H4g25694 | CX4g035968 | LOC_Os08g24980 | - | - | Detail |
| C2H4g08911 | 4:5,953,713-5,956,448 | + | C1H4g19937 | CX4g035259 | LOC_Os04g11970 | Os04g0196200 | OsASMT2 | Detail |
| C2H4g17260 | 4:5,977,877-5,980,574 | - | C1H4g07183 | CX4g034245 | LOC_Os04g12010 | Os04g0196600 | - | Detail |
| C2H4g14785 | 4:6,313,890-6,316,207 | - | C1H4g14978 | CX4g034359 | LOC_Os04g12390 | Os04g0330200 | - | Detail |
| C2H4g03396 | 4:6,335,305-6,336,315 | + | - | CX4g032415 | LOC_Os04g12430 | Os04g0200700 | - | Detail |
| C2H4g26962 | 4:6,336,510-6,342,139 | + | - | CX4g032415 | LOC_Os04g12430 | - | - | Detail |
| C2H4g06118 | 4:6,346,027-6,353,840 | - | - | CX4g031446 | - | - | - | Detail |
| C2H4g10504 | 4:6,362,734-6,369,160 | - | C1H4g16105 | CX4g034375 | LOC_Os04g12480 | Os04g0201200 | - | Detail |
| C2H4g26946 | 4:6,396,910-6,405,329 | - | C1H4g17374 | CX4g036106 | LOC_Os04g12499 | Os04g0201500 | OsAAT30 | Detail |
| C2H4g03852 | 4:6,416,375-6,420,043 | - | C1H4g14971 | CX4g034779 | LOC_Os04g12540 | Os04g0201900 | SDRLK-LecRK1, OsLecRK1, Bph3 | Detail |
| C2H4g15231 | 4:6,427,164-6,428,727 | + | - | - | - | - | - | Detail |
| C2H4g12193 | 4:6,428,170-6,430,605 | - | C1H4g17048 | CX4g034921 | LOC_Os04g12560 | Os04g0202300 | SDRLK-LecRK2, OsLecRK2, Bph3 | Detail |
| C2H4g26627 | 4:6,448,193-6,448,576 | - | - | - | - | Os04g0617200 | - | Detail |
| C2H4g18743 | 4:6,463,388-6,466,416 | - | C1H4g18742 | CX4g032311 | LOC_Os04g12639 | Os04g0203400 | - | Detail |
| C2H4g09802 | 4:6,477,598-6,478,724 | + | C1H4g19896 | CX4g032887 | LOC_Os04g13090 | Os04g0206300 | - | Detail |
| C2H4g10760 | 4:6,479,684-6,480,995 | + | C1H4g09867 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006444 | 1:2,309,629-2,312,863 | + | C1H1g31823 | C2H1g04685 | LOC_Os01g05800 | Os01g0151200 | OsALB3 | Detail |
| CX1g000317 | 1:2,314,944-2,315,138 | - | - | - | - | Os07g0616100 | - | Detail |
| CX1g002082 | 1:2,315,692-2,320,521 | + | C1H1g06017 | C2H1g05574 | LOC_Os01g05810 | Os01g0151400 | - | Detail |
| CX1g004686 | 1:2,321,892-2,326,593 | + | C1H1g05595 | C2H1g26068 | LOC_Os01g05820 | Os01g0151500 | - | Detail |
| CX1g003613 | 1:2,331,187-2,335,009 | + | C1H1g31170 | C2H1g03197 | LOC_Os01g05830 | Os01g0151600 | - | Detail |
| CX1g001726 | 1:2,341,870-2,344,577 | + | C1H1g20436 | C2H1g12467 | LOC_Os01g05840 | Os01g0151700 | - | Detail |
| CX1g001872 | 1:2,345,569-2,345,964 | - | - | - | LOC_Os01g05850 | - | - | Detail |
| CX1g005308 | 1:2,447,819-2,448,286 | + | C1H1g18348 | C2H1g27325 | LOC_Os01g06010 | Os01g0153300 | - | Detail |
| CX1g006939 | 1:2,449,280-2,457,918 | + | C1H1g26052 | C2H1g00877 | LOC_Os01g06020 | Os01g0153400 | - | Detail |
| CX1g002736 | 1:2,461,378-2,462,055 | + | C1H1g28528 | C2H1g24436 | LOC_Os01g06070 | Os01g0153900 | - | Detail |
| CX1g006083 | 1:2,462,990-2,464,210 | - | C1H1g10140 | C2H1g02977 | LOC_Os01g06040 | Os01g0153600 | - | Detail |
| CX1g000606 | 1:2,466,119-2,467,150 | + | - | C2H1g13732 | LOC_Os01g06060 | Os01g0153800 | - | Detail |
| CX1g004075 | 1:2,486,449-2,487,257 | + | C1H1g00559 | C2H1g27678 | LOC_Os01g06130 | Os01g0154500 | - | Detail |
| CX1g002971 | 1:2,489,796-2,490,847 | + | C1H1g04376 | C2H1g07508 | LOC_Os01g06140 | Os01g0154500 | - | Detail |
| CX1g001280 | 1:2,495,719-2,496,551 | + | C1H1g28503 | C2H1g27678 | LOC_Os01g06150 | Os01g0154600 | - | Detail |
| CX1g002692 | 1:2,496,803-2,504,240 | + | C1H1g06489 | - | - | - | - | Detail |
| CX1g001221 | 1:2,505,188-2,506,195 | - | - | C2H1g09424 | LOC_Os01g06220 | Os01g0155000 | - | Detail |
| CX1g006185 | 1:2,506,640-2,506,813 | - | - | - | - | Os02g0188201 | - | Detail |
| CX1g002977 | 1:2,509,267-2,509,542 | + | - | - | LOC_Os01g06230 | - | - | Detail |
| CX1g006111 | 1:2,510,400-2,512,892 | - | C1H1g19662 | C2H1g01659 | LOC_Os01g06240 | Os01g0155200 | SDRLK-11 | Detail |