| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g28900 | 6:5,697,135-5,698,193 | + | C1H6g15439 | CX6g044911 | LOC_Os06g12360 | Os06g0228950 | - | Detail |
| C2H6g05024 | 6:5,698,908-5,701,872 | - | C1H6g14481 | CX6g043477 | LOC_Os06g12370 | Os06g0229000 | - | Detail |
| C2H6g02329 | 6:5,710,871-5,716,601 | + | C1H6g30867 | CX6g043791 | LOC_Os06g12390 | Os06g0229200 | GalT | Detail |
| C2H6g13941 | 6:5,719,681-5,727,442 | + | C1H6g06761 | CX6g041469 | LOC_Os06g12400 | Os06g0229300 | - | Detail |
| C2H6g19443 | 6:5,728,867-5,730,473 | + | C1H6g31791 | CX6g045028 | LOC_Os06g12410 | Os06g0257600 | - | Detail |
| C2H6g15100 | 6:5,731,963-5,736,797 | + | C1H6g30269 | CX6g044435 | LOC_Os06g12450 | Os06g0229800 | ALK, alk, SSII-3, OsSSIIa, OsSSII-3, SSIIa, SSS2A, OsSSIIaChr6 | Detail |
| C2H6g02967 | 6:5,741,601-5,746,594 | + | C1H6g02539 | CX6g041722 | LOC_Os06g12460 | Os06g0230100 | OsCSLA3 | Detail |
| C2H6g18393 | 6:5,755,045-5,755,854 | + | C1H6g20958 | CX6g043899 | LOC_Os06g12500 | Os06g0231050 | CASP3, OsCASP3 | Detail |
| C2H6g07579 | 6:5,756,527-5,758,080 | - | C1H6g22566 | CX6g042564 | LOC_Os06g12510 | Os06g0231100 | - | Detail |
| C2H6g25430 | 6:5,760,221-5,762,376 | + | C1H6g10940 | CX6g042953 | LOC_Os06g12530 | Os06g0231300 | ROX3 | Detail |
| C2H6g00549 | 6:5,762,707-5,764,524 | - | C1H6g22566 | CX6g044108 | LOC_Os06g03570 | Os06g0231400 | - | Detail |
| C2H6g20507 | 6:5,770,817-5,773,183 | - | C1H6g09372 | CX6g042127 | LOC_Os06g12560 | Os06g0231600 | - | Detail |
| C2H6g04942 | 6:5,776,967-5,780,407 | - | C1H6g21654 | CX6g045497 | LOC_Os06g12580 | Os06g0232000 | - | Detail |
| C2H6g06021 | 6:5,784,696-5,794,631 | - | C1H6g16903 | CX6g044039 | LOC_Os06g12590 | Os06g0232100 | - | Detail |
| C2H6g20456 | 6:5,804,890-5,810,664 | + | C1H6g16972 | CX6g043544 | LOC_Os06g12600 | Os06g0232200 | OsFRK3 | Detail |
| C2H6g11066 | 6:5,828,992-5,832,397 | + | C1H6g17211 | CX6g041379 | LOC_Os06g12610 | Os06g0232300 | OsPIN1a | Detail |
| C2H6g00896 | 6:5,829,312-5,830,534 | - | - | - | - | Os06g0232350 | - | Detail |
| C2H6g26342 | 6:5,837,559-5,838,065 | - | C1H6g01622 | CX6g043622 | LOC_Os06g12620 | Os06g0232400 | - | Detail |
| C2H6g04539 | 6:5,851,234-5,854,132 | - | C1H6g13976 | CX6g045802 | LOC_Os06g12630 | Os06g0232600 | - | Detail |
| C2H6g12736 | 6:5,855,278-5,858,915 | + | C1H6g19729 | - | LOC_Os06g12640 | Os06g0232700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006444 | 1:2,309,629-2,312,863 | + | C1H1g31823 | C2H1g04685 | LOC_Os01g05800 | Os01g0151200 | OsALB3 | Detail |
| CX1g000317 | 1:2,314,944-2,315,138 | - | - | - | - | Os07g0616100 | - | Detail |
| CX1g002082 | 1:2,315,692-2,320,521 | + | C1H1g06017 | C2H1g05574 | LOC_Os01g05810 | Os01g0151400 | - | Detail |
| CX1g004686 | 1:2,321,892-2,326,593 | + | C1H1g05595 | C2H1g26068 | LOC_Os01g05820 | Os01g0151500 | - | Detail |
| CX1g003613 | 1:2,331,187-2,335,009 | + | C1H1g31170 | C2H1g03197 | LOC_Os01g05830 | Os01g0151600 | - | Detail |
| CX1g001726 | 1:2,341,870-2,344,577 | + | C1H1g20436 | C2H1g12467 | LOC_Os01g05840 | Os01g0151700 | - | Detail |
| CX1g001872 | 1:2,345,569-2,345,964 | - | - | - | LOC_Os01g05850 | - | - | Detail |
| CX1g005308 | 1:2,447,819-2,448,286 | + | C1H1g18348 | C2H1g27325 | LOC_Os01g06010 | Os01g0153300 | - | Detail |
| CX1g006939 | 1:2,449,280-2,457,918 | + | C1H1g26052 | C2H1g00877 | LOC_Os01g06020 | Os01g0153400 | - | Detail |
| CX1g002736 | 1:2,461,378-2,462,055 | + | C1H1g28528 | C2H1g24436 | LOC_Os01g06070 | Os01g0153900 | - | Detail |
| CX1g006083 | 1:2,462,990-2,464,210 | - | C1H1g10140 | C2H1g02977 | LOC_Os01g06040 | Os01g0153600 | - | Detail |
| CX1g000606 | 1:2,466,119-2,467,150 | + | - | C2H1g13732 | LOC_Os01g06060 | Os01g0153800 | - | Detail |
| CX1g004075 | 1:2,486,449-2,487,257 | + | C1H1g00559 | C2H1g27678 | LOC_Os01g06130 | Os01g0154500 | - | Detail |
| CX1g002971 | 1:2,489,796-2,490,847 | + | C1H1g04376 | C2H1g07508 | LOC_Os01g06140 | Os01g0154500 | - | Detail |
| CX1g001280 | 1:2,495,719-2,496,551 | + | C1H1g28503 | C2H1g27678 | LOC_Os01g06150 | Os01g0154600 | - | Detail |
| CX1g002692 | 1:2,496,803-2,504,240 | + | C1H1g06489 | - | - | - | - | Detail |
| CX1g001221 | 1:2,505,188-2,506,195 | - | - | C2H1g09424 | LOC_Os01g06220 | Os01g0155000 | - | Detail |
| CX1g006185 | 1:2,506,640-2,506,813 | - | - | - | - | Os02g0188201 | - | Detail |
| CX1g002977 | 1:2,509,267-2,509,542 | + | - | - | LOC_Os01g06230 | - | - | Detail |
| CX1g006111 | 1:2,510,400-2,512,892 | - | C1H1g19662 | C2H1g01659 | LOC_Os01g06240 | Os01g0155200 | SDRLK-11 | Detail |