| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g21876 | 1:23,172,459-23,176,288 | + | C2H1g05185 | CX1g003646 | LOC_Os01g45550 | Os01g0643300 | - | Detail |
| C1H1g25133 | 1:23,187,095-23,190,153 | - | C2H1g02636 | CX1g003628 | LOC_Os01g45570 | Os01g0643600 | SGD2, OsHOX3, SGD2/OsHOX3 | Detail |
| C1H1g17824 | 1:23,205,449-23,210,294 | - | C2H1g17274 | CX1g005269 | LOC_Os01g45620 | Os01g0643800 | - | Detail |
| C1H1g01905 | 1:23,209,454-23,209,980 | + | - | - | - | - | - | Detail |
| C1H1g14596 | 1:23,213,913-23,215,505 | + | C2H1g01755 | CX1g004663 | LOC_Os01g45640 | Os01g0644000 | - | Detail |
| C1H1g08154 | 1:23,237,663-23,238,762 | - | C2H1g00660 | CX1g003016 | LOC_Os01g45730 | Os01g0645000 | - | Detail |
| C1H1g06404 | 1:23,245,695-23,252,455 | + | C2H1g06994 | CX1g001972 | LOC_Os01g45750 | Os01g0645200 | - | Detail |
| C1H1g20018 | 1:23,273,241-23,275,506 | + | C2H1g23683 | CX1g005018 | LOC_Os01g45760 | Os01g0645400 | YUCCA1, OsYUCCA1 | Detail |
| C1H1g13313 | 1:23,296,402-23,298,910 | + | C2H1g13756 | CX1g004670 | LOC_Os01g45840 | Os01g0646000 | - | Detail |
| C1H1g03849 | 1:23,322,905-23,323,534 | + | C2H1g20334 | CX1g004039 | LOC_Os01g45900 | Os01g0647000 | - | Detail |
| C1H1g20418 | 1:23,323,788-23,324,312 | + | C2H1g20334 | CX1g004039 | LOC_Os01g45900 | Os01g0647000 | - | Detail |
| C1H1g26424 | 1:23,326,229-23,330,363 | - | C2H1g22575 | CX1g007130 | LOC_Os01g45910 | Os01g0647100 | - | Detail |
| C1H1g25052 | 1:23,346,621-23,347,299 | + | C2H1g13107 | CX1g002028 | - | - | - | Detail |
| C1H1g27497 | 1:23,370,893-23,374,582 | + | C2H1g08187 | CX1g007062 | LOC_Os01g45960 | Os01g0647700 | - | Detail |
| C1H1g28834 | 1:23,376,334-23,382,665 | - | C2H1g18846 | CX1g001110 | LOC_Os01g45990 | Os01g0648000 | OsAKT1, Os-AKT1 | Detail |
| C1H1g12681 | 1:23,400,853-23,403,569 | + | C2H1g00912 | CX1g003797 | LOC_Os01g46020 | Os01g0648500 | - | Detail |
| C1H1g06277 | 1:23,404,154-23,405,706 | + | C2H1g01299 | CX1g003920 | LOC_Os01g46030 | Os01g0648600 | MAK2 | Detail |
| C1H1g05715 | 1:23,406,335-23,410,389 | - | C2H1g27065 | CX1g001434 | LOC_Os01g46040 | Os01g0648700 | - | Detail |
| C1H1g20458 | 1:23,414,710-23,421,129 | + | C2H1g30673 | CX1g006886 | LOC_Os01g46060 | Os01g0649000 | - | Detail |
| C1H1g04276 | 1:23,422,062-23,425,981 | + | C2H1g05562 | CX1g003803 | LOC_Os01g46070 | Os01g0649100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006444 | 1:2,309,629-2,312,863 | + | C1H1g31823 | C2H1g04685 | LOC_Os01g05800 | Os01g0151200 | OsALB3 | Detail |
| CX1g000317 | 1:2,314,944-2,315,138 | - | - | - | - | Os07g0616100 | - | Detail |
| CX1g002082 | 1:2,315,692-2,320,521 | + | C1H1g06017 | C2H1g05574 | LOC_Os01g05810 | Os01g0151400 | - | Detail |
| CX1g004686 | 1:2,321,892-2,326,593 | + | C1H1g05595 | C2H1g26068 | LOC_Os01g05820 | Os01g0151500 | - | Detail |
| CX1g003613 | 1:2,331,187-2,335,009 | + | C1H1g31170 | C2H1g03197 | LOC_Os01g05830 | Os01g0151600 | - | Detail |
| CX1g001726 | 1:2,341,870-2,344,577 | + | C1H1g20436 | C2H1g12467 | LOC_Os01g05840 | Os01g0151700 | - | Detail |
| CX1g001872 | 1:2,345,569-2,345,964 | - | - | - | LOC_Os01g05850 | - | - | Detail |
| CX1g005308 | 1:2,447,819-2,448,286 | + | C1H1g18348 | C2H1g27325 | LOC_Os01g06010 | Os01g0153300 | - | Detail |
| CX1g006939 | 1:2,449,280-2,457,918 | + | C1H1g26052 | C2H1g00877 | LOC_Os01g06020 | Os01g0153400 | - | Detail |
| CX1g002736 | 1:2,461,378-2,462,055 | + | C1H1g28528 | C2H1g24436 | LOC_Os01g06070 | Os01g0153900 | - | Detail |
| CX1g006083 | 1:2,462,990-2,464,210 | - | C1H1g10140 | C2H1g02977 | LOC_Os01g06040 | Os01g0153600 | - | Detail |
| CX1g000606 | 1:2,466,119-2,467,150 | + | - | C2H1g13732 | LOC_Os01g06060 | Os01g0153800 | - | Detail |
| CX1g004075 | 1:2,486,449-2,487,257 | + | C1H1g00559 | C2H1g27678 | LOC_Os01g06130 | Os01g0154500 | - | Detail |
| CX1g002971 | 1:2,489,796-2,490,847 | + | C1H1g04376 | C2H1g07508 | LOC_Os01g06140 | Os01g0154500 | - | Detail |
| CX1g001280 | 1:2,495,719-2,496,551 | + | C1H1g28503 | C2H1g27678 | LOC_Os01g06150 | Os01g0154600 | - | Detail |
| CX1g002692 | 1:2,496,803-2,504,240 | + | C1H1g06489 | - | - | - | - | Detail |
| CX1g001221 | 1:2,505,188-2,506,195 | - | - | C2H1g09424 | LOC_Os01g06220 | Os01g0155000 | - | Detail |
| CX1g006185 | 1:2,506,640-2,506,813 | - | - | - | - | Os02g0188201 | - | Detail |
| CX1g002977 | 1:2,509,267-2,509,542 | + | - | - | LOC_Os01g06230 | - | - | Detail |
| CX1g006111 | 1:2,510,400-2,512,892 | - | C1H1g19662 | C2H1g01659 | LOC_Os01g06240 | Os01g0155200 | SDRLK-11 | Detail |