| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g22731 | 1:24,806,899-24,821,417 | - | C2H1g03816 | CX1g004904 | LOC_Os01g48680 | Os01g0678500 | TPC1, OsTPC1, Tpc1, OsCC1 | Detail |
| C1H1g06484 | 1:24,822,645-24,824,648 | + | C2H1g17432 | CX1g001832 | LOC_Os01g48690 | Os01g0678600 | - | Detail |
| C1H1g21202 | 1:24,825,534-24,828,516 | - | C2H1g29587 | CX1g005378 | LOC_Os01g48700 | Os01g0678700 | - | Detail |
| C1H1g29809 | 1:24,831,421-24,834,882 | + | C2H1g22453 | CX1g000800 | - | - | - | Detail |
| C1H1g09148 | 1:24,836,776-24,837,408 | - | C2H1g18621 | CX1g006182 | LOC_Os01g48710 | Os01g0678800 | - | Detail |
| C1H1g01369 | 1:24,845,874-24,854,466 | + | C2H1g02873 | CX1g006519 | LOC_Os01g48720 | Os01g0679000 | - | Detail |
| C1H1g15834 | 1:24,862,555-24,939,365 | - | C2H1g22016 | CX1g002522 | LOC_Os01g48830 | Os01g0680700 | - | Detail |
| C1H1g09308 | 1:24,863,371-24,867,936 | + | C2H1g10975 | CX1g004313 | LOC_Os01g48750 | Os01g0679550 | - | Detail |
| C1H1g00895 | 1:24,869,571-24,872,932 | + | C2H1g25010 | CX1g003619 | LOC_Os01g48760 | Os01g0679600 | - | Detail |
| C1H1g15404 | 1:24,886,940-24,893,719 | + | C2H1g01242 | CX1g003718 | LOC_Os01g48790 | Os01g0679900 | - | Detail |
| C1H1g14743 | 1:24,904,493-24,905,653 | + | C2H1g18628 | CX1g004327 | LOC_Os01g48800 | Os01g0680200 | OsPUP4, BG3/OsPUP4, BG3 | Detail |
| C1H1g08166 | 1:24,917,950-24,920,122 | + | C2H1g09841 | CX1g006918 | LOC_Os01g48810 | Os01g0680400 | - | Detail |
| C1H1g07424 | 1:24,925,640-24,926,551 | + | C2H1g14175 | CX1g002655 | LOC_Os01g48820 | Os01g0680600 | - | Detail |
| C1H1g07492 | 1:24,931,644-24,932,133 | + | - | - | - | Os01g0680650 | - | Detail |
| C1H1g17992 | 1:24,948,315-24,950,911 | - | C2H1g29263 | CX1g007143 | LOC_Os01g48850 | Os01g0680900 | - | Detail |
| C1H1g20689 | 1:24,952,547-24,958,250 | - | C2H1g05013 | CX1g002388 | LOC_Os01g48874 | Os01g0681000 | - | Detail |
| C1H1g14533 | 1:24,963,599-24,966,274 | + | C2H1g17133 | CX1g001461 | LOC_Os01g48900 | Os01g0681100 | - | Detail |
| C1H1g07251 | 1:24,966,702-24,969,016 | + | C2H1g07127 | CX1g001461 | LOC_Os01g48900 | Os05g0556100 | - | Detail |
| C1H1g21340 | 1:24,970,459-24,975,608 | - | C2H1g13127 | CX1g007055 | LOC_Os01g48910 | Os01g0681200 | - | Detail |
| C1H1g18369 | 1:24,978,777-24,984,105 | - | C2H1g29187 | CX1g000478 | LOC_Os01g48920 | Os01g0681400 | ATG6A, OsATG6a | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g048013 | 7:15,963,083-15,972,509 | + | C1H7g28485 | C2H7g07106 | LOC_Os07g32890 | Os07g0513100 | - | Detail |
| CX7g048456 | 7:15,973,066-15,974,364 | + | C1H7g27840 | - | LOC_Os07g32880 | Os07g0513000 | - | Detail |
| CX7g046461 | 7:15,985,144-15,989,990 | - | C1H7g08222 | C2H7g24552 | LOC_Os07g33050 | Os07g0514400 | - | Detail |
| CX7g048067 | 7:16,015,441-16,021,615 | + | C1H7g14050 | C2H7g08026 | LOC_Os07g33100 | Os07g0515000 | - | Detail |
| CX7g048097 | 7:16,022,282-16,027,076 | - | C1H7g12050 | C2H7g25765 | LOC_Os07g33110 | Os07g0515100 | OsCDPK2 | Detail |
| CX7g047819 | 7:16,073,499-16,079,184 | + | C1H7g28613 | C2H7g17448 | LOC_Os07g33224 | Os07g0516050 | - | Detail |
| CX7g050382 | 7:16,080,377-16,081,204 | + | C1H7g19632 | C2H7g26827 | LOC_Os07g33230 | Os07g0516100 | - | Detail |
| CX7g048373 | 7:16,082,226-16,084,679 | + | C1H7g31619 | C2H7g03457 | LOC_Os07g33240 | Os07g0516200 | - | Detail |
| CX7g048619 | 7:16,097,854-16,098,423 | - | - | - | LOC_Os07g33270 | Os07g0516300 | OsS40-15 | Detail |
| CX7g048339 | 7:16,112,019-16,112,219 | + | - | - | - | - | - | Detail |
| CX7g046911 | 7:16,118,846-16,119,085 | + | - | C2H7g22219 | LOC_Os07g33280 | Os07g0516400 | - | Detail |
| CX7g047014 | 7:16,125,872-16,128,489 | + | C1H7g20323 | C2H7g07247 | LOC_Os07g33310 | Os07g0516600 | - | Detail |
| CX7g049504 | 7:16,131,240-16,131,731 | - | - | - | - | - | - | Detail |
| CX7g048850 | 7:16,134,464-16,139,488 | + | C1H7g22367 | C2H7g27434 | LOC_Os07g33330 | Os07g0516900 | - | Detail |
| CX7g048967 | 7:16,141,783-16,144,075 | + | C1H7g20402 | C2H7g03216 | LOC_Os03g08640 | Os03g0184700 | OsORC2 | Detail |
| CX7g050010 | 7:16,146,910-16,150,266 | - | C1H7g16327 | C2H7g09769 | LOC_Os07g33340 | Os07g0517000 | - | Detail |
| CX7g048211 | 7:16,154,025-16,154,625 | + | C1H7g09809 | C2H7g18778 | LOC_Os07g33350 | Os07g0517100 | - | Detail |
| CX7g049562 | 7:16,154,992-16,160,846 | + | C1H7g30752 | C2H7g19466 | LOC_Os07g33360 | Os07g0517300 | - | Detail |
| CX7g050417 | 7:16,162,120-16,168,935 | - | C1H7g17053 | C2H7g25127 | LOC_Os07g33370 | Os07g0517400 | - | Detail |
| CX7g050314 | 7:16,174,722-16,176,285 | + | C1H7g05717 | C2H7g25007 | LOC_Os07g33390 | Os07g0517600 | OsAAA-ATPase6 | Detail |