| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g03677 | 1:5,228,990-5,233,936 | - | C2H1g07094 | CX1g001003 | LOC_Os01g11120 | Os01g0209400 | - | Detail |
| C1H1g12202 | 1:5,240,740-5,247,086 | - | C2H1g19634 | CX1g000194 | LOC_Os01g11130 | Os01g0209500 | - | Detail |
| C1H1g22199 | 1:5,260,169-5,263,608 | - | C2H1g00003 | CX1g004422 | LOC_Os01g11150 | Os01g0209700 | GA2ox7 | Detail |
| C1H1g04985 | 1:5,275,210-5,277,507 | - | C2H1g04035 | CX1g004758 | LOC_Os01g11160 | Os01g0209800 | - | Detail |
| C1H1g27615 | 1:5,290,703-5,291,914 | + | C2H1g10978 | CX1g001982 | LOC_Os01g11210 | Os01g0210300 | - | Detail |
| C1H1g05366 | 1:5,292,191-5,294,314 | - | C2H1g29549 | CX1g004173 | LOC_Os01g11220 | Os01g0210400 | OsTOD1 | Detail |
| C1H1g26696 | 1:5,295,196-5,296,298 | - | - | - | LOC_Os01g11230 | - | - | Detail |
| C1H1g15458 | 1:5,308,574-5,312,697 | + | C2H1g02275 | - | - | Os01g0210750 | - | Detail |
| C1H1g12886 | 1:5,309,605-5,313,470 | - | C2H1g05349 | CX1g002610 | LOC_Os01g11250 | Os01g0210700 | KAT2, OsKAT2 | Detail |
| C1H1g30027 | 1:5,316,751-5,321,347 | + | C2H1g07302 | CX1g004526 | LOC_Os01g11260 | Os01g0210800 | - | Detail |
| C1H1g07906 | 1:5,367,183-5,368,508 | - | C2H1g05400 | - | LOC_Os01g11350 | Os01g0211800 | - | Detail |
| C1H1g25024 | 1:5,381,875-5,394,457 | + | C2H1g30364 | CX1g006413 | LOC_Os01g11370 | Os01g0212100 | - | Detail |
| C1H1g24516 | 1:5,402,401-5,407,612 | + | C2H1g07400 | CX1g004990 | LOC_Os01g11414 | Os01g0212400 | - | Detail |
| C1H1g10197 | 1:5,408,201-5,409,925 | - | C2H1g07852 | CX1g007192 | LOC_Os01g11430 | Os01g0212500 | OsTIE1 | Detail |
| C1H1g30544 | 1:5,417,884-5,418,288 | - | - | - | - | - | - | Detail |
| C1H1g26340 | 1:5,433,082-5,438,674 | - | C2H1g19922 | CX1g001182 | LOC_Os01g11460 | Os01g0212700 | - | Detail |
| C1H1g22295 | 1:5,441,280-5,441,984 | - | C2H1g00533 | CX1g001182 | LOC_Os01g11490 | Os01g0213100 | - | Detail |
| C1H1g24050 | 1:5,445,123-5,445,803 | - | C2H1g20430 | CX1g001182 | LOC_Os01g11500 | Os01g0213100 | - | Detail |
| C1H1g28036 | 1:5,473,048-5,474,935 | - | C2H1g27187 | CX1g004394 | LOC_Os01g11550 | Os01g0213800 | OsPCF5, PCF5, OsTCP1, OsTCP1/PCF5 | Detail |
| C1H1g17492 | 1:5,497,154-5,499,229 | - | C2H1g17634 | CX1g003866 | LOC_Os01g11570 | Os01g0214200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g049530 | 7:15,576,800-15,580,754 | - | C1H7g12287 | C2H7g29400 | LOC_Os07g32380 | Os07g0507000 | OsPP95 | Detail |
| CX7g047292 | 7:15,586,839-15,591,431 | - | C1H7g27929 | C2H7g08273 | LOC_Os07g32390 | Os07g0507200 | - | Detail |
| CX7g047322 | 7:15,592,556-15,601,602 | - | C1H7g20240 | C2H7g26668 | LOC_Os07g32400 | Os07g0507300 | - | Detail |
| CX7g046253 | 7:15,605,673-15,608,438 | - | C1H7g03341 | C2H7g00392 | LOC_Os07g32406 | Os07g0507500 | OsMAIL1 | Detail |
| CX7g046121 | 7:15,610,817-15,613,009 | - | C1H7g16709 | C2H7g30324 | LOC_Os07g32412 | Os07g0507600 | - | Detail |
| CX7g047482 | 7:15,616,908-15,617,060 | - | - | - | - | Os07g0616100 | - | Detail |
| CX7g049694 | 7:15,618,931-15,623,071 | + | C1H7g03055 | C2H7g11809 | LOC_Os07g32420 | Os07g0507700 | - | Detail |
| CX7g048937 | 7:15,624,906-15,632,619 | - | C1H7g16228 | C2H7g13632 | LOC_Os07g32430 | Os07g0508000 | - | Detail |
| CX7g049094 | 7:15,634,749-15,634,970 | + | - | - | - | Os07g0508101 | - | Detail |
| CX7g046889 | 7:15,639,465-15,643,898 | + | C1H7g08923 | C2H7g25775 | LOC_Os07g32450 | Os07g0508200 | - | Detail |
| CX7g047549 | 7:15,644,911-15,650,236 | - | C1H7g01669 | C2H7g14915 | LOC_Os07g32460 | Os07g0508300 | - | Detail |
| CX7g049633 | 7:15,663,833-15,669,565 | + | C1H7g24408 | C2H7g06112 | LOC_Os07g32480 | Os07g0508500 | BRK1 | Detail |
| CX7g047029 | 7:15,687,175-15,687,330 | - | - | - | - | - | - | Detail |
| CX7g046526 | 7:15,701,051-15,702,139 | + | C1H7g24592 | C2H7g18355 | LOC_Os07g32510 | Os07g0508700 | - | Detail |
| CX7g047185 | 7:15,714,513-15,715,172 | - | - | - | - | - | - | Detail |
| CX7g048366 | 7:15,718,845-15,725,932 | - | C1H7g09137 | C2H7g27627 | LOC_Os07g32530 | Os07g0509200 | - | Detail |
| CX7g047843 | 7:15,735,495-15,736,641 | + | C1H7g24546 | C2H7g30249 | LOC_Os07g32550 | Os07g0509600 | - | Detail |
| CX7g046136 | 7:15,738,078-15,738,965 | - | - | - | LOC_Os07g32560 | Os07g0509700 | - | Detail |
| CX7g048497 | 7:15,743,980-15,746,887 | - | C1H7g20946 | C2H7g12378 | LOC_Os07g32570 | Os07g0509800 | - | Detail |
| CX7g047635 | 7:15,751,119-15,752,093 | + | - | - | - | - | - | Detail |