| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g13446 | 3:15,441,855-15,444,790 | + | C2H3g28547 | CX3g026824 | LOC_Os03g29810 | Os03g0411500 | VYL, OsClpP6, ClpP6, CLP6 | Detail |
| C1H3g17384 | 3:15,446,063-15,447,888 | + | C2H3g05086 | CX3g028485 | LOC_Os03g29830 | Os03g0411600 | - | Detail |
| C1H3g16278 | 3:15,454,788-15,458,812 | - | C2H3g03300 | CX3g026254 | LOC_Os03g29850 | Os03g0411800 | - | Detail |
| C1H3g01152 | 3:15,493,558-15,497,840 | + | C2H3g18598 | CX3g025249 | LOC_Os03g29910 | Os03g0412200 | - | Detail |
| C1H3g29513 | 3:15,504,089-15,505,016 | + | C2H3g25598 | CX3g027118 | LOC_Os03g29920 | Os03g0412300 | - | Detail |
| C1H3g14020 | 3:15,509,912-15,510,796 | - | C2H3g13302 | CX3g026464 | LOC_Os03g29930 | Os03g0412400 | - | Detail |
| C1H3g23937 | 3:15,529,629-15,536,720 | + | C2H3g28011 | CX3g026817 | LOC_Os03g29950 | Os03g0412800 | - | Detail |
| C1H3g13193 | 3:15,550,436-15,557,135 | + | C2H3g06222 | CX3g030482 | LOC_Os03g29960 | Os03g0412900 | - | Detail |
| C1H3g10486 | 3:15,568,207-15,572,329 | + | C2H3g21811 | CX3g029713 | LOC_Os03g29980 | Os03g0413100 | - | Detail |
| C1H3g17935 | 3:15,580,436-15,586,269 | - | C2H3g29744 | CX3g028183 | LOC_Os03g30000 | Os03g0413400 | - | Detail |
| C1H3g29820 | 3:15,619,439-15,620,660 | + | - | - | - | Os03g0414200 | - | Detail |
| C1H3g00999 | 3:15,637,124-15,638,153 | - | - | CX3g027342 | LOC_Os03g30092 | Os03g0414400 | OsHCF222 | Detail |
| C1H3g09941 | 3:15,669,135-15,669,926 | + | C2H3g13977 | CX3g026035 | LOC_Os03g30120 | Os03g0414900 | - | Detail |
| C1H3g17098 | 3:15,678,936-15,682,018 | - | C2H3g10779 | CX3g031360 | LOC_Os03g30130 | Os03g0415200 | - | Detail |
| C1H3g25399 | 3:15,692,516-15,692,890 | + | C2H3g22648 | - | - | - | - | Detail |
| C1H3g19128 | 3:15,693,759-15,694,121 | + | C2H3g22648 | CX3g028346 | LOC_Os03g30220 | Os03g0415600 | - | Detail |
| C1H3g23999 | 3:15,694,401-15,695,009 | + | C2H3g22648 | CX3g028346 | LOC_Os03g30220 | Os03g0415700 | - | Detail |
| C1H3g25355 | 3:15,705,622-15,707,536 | + | C2H3g10116 | CX3g025881 | LOC_Os03g30250 | Os03g0416200 | - | Detail |
| C1H3g20080 | 3:15,707,813-15,711,121 | - | C2H3g04729 | CX3g027193 | LOC_Os03g30260 | Os03g0416300 | OsBC1L2 | Detail |
| C1H3g12535 | 3:15,723,016-15,727,423 | - | C2H3g26266 | CX3g030769 | LOC_Os03g30300 | Os03g0416500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g048442 | 7:14,660,373-14,661,126 | + | - | - | - | - | - | Detail |
| CX7g047983 | 7:14,662,524-14,664,581 | + | C1H2g11465 | C2H7g17618 | - | - | - | Detail |
| CX7g046891 | 7:14,679,316-14,680,998 | + | - | C2H7g05895 | LOC_Os07g30280 | Os07g0486400 | - | Detail |
| CX7g048234 | 7:14,686,914-14,690,431 | + | C1H7g05089 | C2H7g15831 | LOC_Os07g30300 | Os07g0486500 | - | Detail |
| CX7g046528 | 7:14,713,587-14,715,050 | + | C1H7g18415 | C2H7g16403 | LOC_Os07g30369 | Os07g0489950 | - | Detail |
| CX7g046748 | 7:14,727,587-14,731,623 | - | C1H7g06352 | C2H7g12584 | LOC_Os07g30410 | Os07g0488400 | LIL1 | Detail |
| CX7g047870 | 7:14,747,798-14,748,664 | - | C1H7g11935 | C2H7g08605 | LOC_Os07g30590 | Os07g0489000 | - | Detail |
| CX7g049896 | 7:14,751,304-14,758,021 | + | C1H7g07877 | C2H7g27638 | LOC_Os07g30600 | Os07g0489100 | OsFAR7 | Detail |
| CX7g046886 | 7:14,761,785-14,765,205 | + | C1H7g17328 | C2H7g27270 | LOC_Os07g27660 | Os07g0546750 | - | Detail |
| CX7g048384 | 7:14,765,399-14,765,578 | - | - | - | - | - | - | Detail |
| CX7g047811 | 7:14,767,663-14,769,105 | - | C1H7g27764 | C2H7g04415 | LOC_Os07g30610 | Os07g0489200 | - | Detail |
| CX7g050041 | 7:14,779,769-14,781,253 | - | C1H7g18415 | C2H7g05310 | LOC_Os07g30620 | Os07g0489300 | - | Detail |
| CX7g047781 | 7:14,794,162-14,794,365 | + | - | - | - | Os07g0596950 | - | Detail |
| CX7g047438 | 7:14,795,864-14,797,460 | + | C1H7g29303 | C2H7g10334 | LOC_Os07g30670 | Os07g0489800 | - | Detail |
| CX7g048209 | 7:14,815,593-14,817,065 | + | C1H7g11548 | C2H7g08824 | LOC_Os07g30690 | Os07g0489950 | - | Detail |
| CX7g048524 | 7:14,825,501-14,826,943 | + | C1H7g11548 | C2H7g08824 | LOC_Os07g30760 | Os07g0490100 | - | Detail |
| CX7g048360 | 7:14,827,627-14,836,687 | - | C1H7g05364 | C2H7g09498 | LOC_Os07g30774 | Os07g0490200 | - | Detail |
| CX7g049552 | 7:14,841,708-14,847,032 | - | C1H7g11282 | C2H7g20192 | LOC_Os07g30790 | Os07g0490300 | - | Detail |
| CX7g049122 | 7:14,847,440-14,850,774 | + | C1H7g00251 | C2H7g03971 | LOC_Os07g30800 | Os07g0490400 | - | Detail |
| CX7g047045 | 7:14,855,201-14,860,424 | + | C1H7g29765 | C2H7g25617 | LOC_Os07g30810 | Os07g0490500 | - | Detail |