| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g22835 | 3:31,609,394-31,611,705 | - | C1H3g07336 | CX3g028951 | LOC_Os03g60992 | - | - | Detail |
| C2H3g07063 | 3:31,620,336-31,625,319 | + | C1H3g10094 | CX3g028028 | LOC_Os03g61010 | Os03g0825300 | - | Detail |
| C2H3g11868 | 3:31,626,305-31,627,947 | - | C1H3g04477 | CX3g028738 | LOC_Os03g61019 | Os03g0825400 | - | Detail |
| C2H3g12188 | 3:31,628,373-31,630,235 | + | C1H3g13397 | CX3g026510 | LOC_Os03g61030 | Os03g0825500 | - | Detail |
| C2H3g22286 | 3:31,637,698-31,645,717 | + | C1H3g30577 | CX3g031039 | LOC_Os03g61050 | Os03g0825700 | Os DEX1, OsDEX1 | Detail |
| C2H3g05833 | 3:31,645,891-31,648,444 | - | C1H3g02346 | CX3g027996 | LOC_Os03g61060 | Os03g0825800 | - | Detail |
| C2H3g07911 | 3:31,660,708-31,665,365 | - | C1H3g07590 | CX3g030592 | LOC_Os03g61080 | Os03g0826000 | - | Detail |
| C2H3g28509 | 3:31,667,901-31,670,590 | - | C1H3g21357 | CX3g030265 | LOC_Os03g61100 | Os03g0826300 | - | Detail |
| C2H3g11545 | 3:31,672,509-31,674,426 | + | C1H3g28916 | CX3g025977 | LOC_Os03g61110 | Os03g0826400 | - | Detail |
| C2H3g21893 | 3:31,675,063-31,680,451 | - | C1H3g22562 | CX3g029605 | LOC_Os03g61120 | Os03g0826500 | OASA1 | Detail |
| C2H3g05353 | 3:31,682,682-31,685,620 | + | C1H3g26880 | CX3g025000 | LOC_Os03g61130 | Os03g0826600 | NPC1, OsNPC1 | Detail |
| C2H3g28499 | 3:31,686,162-31,689,506 | - | C1H3g05534 | CX3g028046 | LOC_Os03g61140 | Os03g0826700 | - | Detail |
| C2H3g14501 | 3:31,692,564-31,693,909 | - | C1H3g12263 | CX3g028016 | LOC_Os03g61160 | Os03g0826800 | - | Detail |
| C2H3g13944 | 3:31,698,472-31,699,458 | - | C1H3g01008 | CX3g027714 | LOC_Os03g61160 | Os03g0826900 | - | Detail |
| C2H3g09376 | 3:31,702,301-31,704,124 | + | C1H3g06986 | CX3g026377 | LOC_Os03g61200 | Os03g0827500 | - | Detail |
| C2H3g26774 | 3:31,704,409-31,704,639 | + | C1H3g22721 | CX3g026377 | LOC_Os03g61200 | Os03g0827500 | - | Detail |
| C2H3g01649 | 3:31,705,584-31,708,924 | - | C1H3g20175 | CX3g026728 | LOC_Os03g61210 | Os03g0827600 | - | Detail |
| C2H3g01744 | 3:31,712,594-31,718,969 | + | C1H3g27004 | CX3g028357 | LOC_Os03g61220 | Os03g0827700 | - | Detail |
| C2H3g15439 | 3:31,737,766-31,742,259 | - | C1H3g05040 | CX3g026752 | LOC_Os03g61290 | Os03g0828600 | - | Detail |
| C2H3g19505 | 3:31,744,337-31,747,670 | - | C1H3g03156 | CX3g028380 | LOC_Os03g61280 | Os03g0828500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g048988 | 7:14,441,033-14,445,043 | + | C1H7g01187 | C2H7g08081 | LOC_Os07g29810 | Os07g0481300 | - | Detail |
| CX7g049622 | 7:14,459,735-14,460,658 | + | C1H7g20643 | C2H7g01767 | LOC_Os07g31070 | Os07g0482433 | - | Detail |
| CX7g046236 | 7:14,464,901-14,466,400 | + | C1H7g12460 | C2H7g00792 | LOC_Os07g29830 | Os07g0492966 | - | Detail |
| CX7g046285 | 7:14,478,081-14,480,902 | - | C1H7g25439 | C2H7g03865 | LOC_Os07g29960 | Os07g0482900 | - | Detail |
| CX7g049007 | 7:14,499,816-14,499,998 | + | - | - | - | Os07g0616100 | - | Detail |
| CX7g046925 | 7:14,509,149-14,510,882 | - | C1H7g00758 | C2H7g12658 | LOC_Os07g30020 | Os07g0483500 | - | Detail |
| CX7g049843 | 7:14,533,403-14,534,818 | + | C1H7g20920 | C2H7g24842 | LOC_Os07g30090 | Os07g0484200 | - | Detail |
| CX7g047443 | 7:14,537,397-14,548,843 | - | C1H7g24417 | C2H7g15400 | LOC_Os07g30100 | Os07g0484300 | - | Detail |
| CX7g050338 | 7:14,566,671-14,566,826 | - | - | - | - | - | - | Detail |
| CX7g046292 | 7:14,572,698-14,576,418 | + | C1H7g17450 | C2H7g08443 | LOC_Os07g30110 | Os07g0484500 | - | Detail |
| CX7g047351 | 7:14,608,982-14,610,941 | + | C1H7g14423 | C2H7g13834 | LOC_Os07g30160 | Os07g0485000 | - | Detail |
| CX7g048078 | 7:14,611,493-14,614,335 | - | C1H7g26216 | C2H7g08877 | LOC_Os07g30170 | Os07g0485100 | Osb-UP, Osbeta-UP, Osβ-UP | Detail |
| CX7g046479 | 7:14,622,488-14,624,458 | + | C1H7g07367 | C2H7g20794 | LOC_Os07g32910 | - | - | Detail |
| CX7g049962 | 7:14,624,561-14,625,114 | - | - | - | - | - | - | Detail |
| CX7g046682 | 7:14,626,803-14,632,875 | + | C1H7g17380 | C2H7g13444 | LOC_Os07g30200 | Os07g0485400 | - | Detail |
| CX7g048279 | 7:14,633,431-14,637,112 | - | C1H7g26491 | C2H7g07219 | LOC_Os07g30210 | Os07g0485500 | - | Detail |
| CX7g046022 | 7:14,639,017-14,639,797 | - | C1H7g03824 | C2H7g22225 | LOC_Os07g30220 | Os07g0485600 | - | Detail |
| CX7g050000 | 7:14,641,635-14,651,188 | + | C1H7g24847 | C2H7g21520 | LOC_Os07g30240 | Os07g0486000 | OsMSH4, MSH4 | Detail |
| CX7g046844 | 7:14,652,595-14,658,899 | - | C1H7g29218 | C2H7g19758 | LOC_Os07g30250 | Os07g0486100 | - | Detail |
| CX7g046530 | 7:14,659,294-14,659,467 | - | - | - | - | - | - | Detail |