| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g04200 | 9:8,853,835-8,858,892 | + | C2H9g04733 | CX9g058145 | LOC_Os09g17600 | Os09g0344800 | - | Detail |
| C1H9g04592 | 9:8,859,596-8,860,617 | + | C2H9g26356 | CX9g055119 | LOC_Os09g17610 | Os09g0344900 | - | Detail |
| C1H9g17730 | 9:8,861,207-8,863,495 | - | C2H9g02750 | CX9g055218 | LOC_Os09g17620 | Os09g0345000 | - | Detail |
| C1H9g12543 | 9:8,869,656-8,878,408 | + | C2H9g15758 | CX9g057967 | LOC_Os09g17630 | Os09g0345300 | - | Detail |
| C1H9g04492 | 9:8,881,472-8,882,343 | + | C2H9g11168 | - | LOC_Os09g17650 | Os09g0345400 | - | Detail |
| C1H9g05000 | 9:8,884,939-8,886,091 | + | C2H9g17177 | - | LOC_Os09g17660 | Os09g0345500 | - | Detail |
| C1H9g07306 | 9:8,892,646-8,893,792 | + | C2H9g17177 | - | LOC_Os09g17660 | Os09g0345500 | - | Detail |
| C1H9g24944 | 9:8,900,804-8,903,094 | - | C2H9g30162 | CX9g055992 | LOC_Os09g17680 | Os09g0345700 | - | Detail |
| C1H9g22439 | 9:8,911,677-8,919,929 | + | C2H9g03639 | CX9g056299 | LOC_Os09g17730 | Os09g0346400 | - | Detail |
| C1H9g02390 | 9:8,925,679-8,926,042 | - | C2H9g12579 | CX9g056958 | LOC_Os09g17750 | Os09g0346600 | - | Detail |
| C1H9g00089 | 9:8,927,418-8,928,634 | - | C2H9g12579 | CX9g056958 | LOC_Os09g17750 | Os09g0346600 | - | Detail |
| C1H9g13223 | 9:8,940,905-8,946,983 | - | C2H9g29631 | CX9g055122 | LOC_Os09g17760 | Os09g0346700 | - | Detail |
| C1H9g09773 | 9:8,957,138-8,960,787 | - | C2H9g05792 | CX9g054886 | LOC_Os09g17770 | Os09g0346900 | - | Detail |
| C1H9g27802 | 9:8,991,609-8,995,590 | - | C2H9g15118 | CX9g057025 | LOC_Os09g17840 | Os09g0347700 | - | Detail |
| C1H9g03812 | 9:9,009,047-9,013,167 | - | C2H9g20367 | CX9g054842 | LOC_Os09g17830 | Os09g0347700 | - | Detail |
| C1H9g13400 | 9:9,016,293-9,025,573 | + | C2H9g23264 | CX9g055178 | LOC_Os09g17850 | Os09g0347800 | HAT1, HAG704, OsHAG704 | Detail |
| C1H9g14906 | 9:9,027,115-9,031,831 | - | C2H9g21819 | CX9g056471 | LOC_Os09g17870 | Os09g0347900 | - | Detail |
| C1H9g20798 | 9:9,045,300-9,045,557 | - | - | - | - | - | - | Detail |
| C1H9g21131 | 9:9,057,052-9,057,364 | + | C2H9g04789 | CX9g055803 | LOC_Os09g17880 | Os09g0358100 | - | Detail |
| C1H9g20063 | 9:9,057,939-9,067,805 | + | C2H9g28813 | CX9g055270 | LOC_Os09g17890 | Os09g0348400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g048988 | 7:14,441,033-14,445,043 | + | C1H7g01187 | C2H7g08081 | LOC_Os07g29810 | Os07g0481300 | - | Detail |
| CX7g049622 | 7:14,459,735-14,460,658 | + | C1H7g20643 | C2H7g01767 | LOC_Os07g31070 | Os07g0482433 | - | Detail |
| CX7g046236 | 7:14,464,901-14,466,400 | + | C1H7g12460 | C2H7g00792 | LOC_Os07g29830 | Os07g0492966 | - | Detail |
| CX7g046285 | 7:14,478,081-14,480,902 | - | C1H7g25439 | C2H7g03865 | LOC_Os07g29960 | Os07g0482900 | - | Detail |
| CX7g049007 | 7:14,499,816-14,499,998 | + | - | - | - | Os07g0616100 | - | Detail |
| CX7g046925 | 7:14,509,149-14,510,882 | - | C1H7g00758 | C2H7g12658 | LOC_Os07g30020 | Os07g0483500 | - | Detail |
| CX7g049843 | 7:14,533,403-14,534,818 | + | C1H7g20920 | C2H7g24842 | LOC_Os07g30090 | Os07g0484200 | - | Detail |
| CX7g047443 | 7:14,537,397-14,548,843 | - | C1H7g24417 | C2H7g15400 | LOC_Os07g30100 | Os07g0484300 | - | Detail |
| CX7g050338 | 7:14,566,671-14,566,826 | - | - | - | - | - | - | Detail |
| CX7g046292 | 7:14,572,698-14,576,418 | + | C1H7g17450 | C2H7g08443 | LOC_Os07g30110 | Os07g0484500 | - | Detail |
| CX7g047351 | 7:14,608,982-14,610,941 | + | C1H7g14423 | C2H7g13834 | LOC_Os07g30160 | Os07g0485000 | - | Detail |
| CX7g048078 | 7:14,611,493-14,614,335 | - | C1H7g26216 | C2H7g08877 | LOC_Os07g30170 | Os07g0485100 | Osb-UP, Osbeta-UP, Osβ-UP | Detail |
| CX7g046479 | 7:14,622,488-14,624,458 | + | C1H7g07367 | C2H7g20794 | LOC_Os07g32910 | - | - | Detail |
| CX7g049962 | 7:14,624,561-14,625,114 | - | - | - | - | - | - | Detail |
| CX7g046682 | 7:14,626,803-14,632,875 | + | C1H7g17380 | C2H7g13444 | LOC_Os07g30200 | Os07g0485400 | - | Detail |
| CX7g048279 | 7:14,633,431-14,637,112 | - | C1H7g26491 | C2H7g07219 | LOC_Os07g30210 | Os07g0485500 | - | Detail |
| CX7g046022 | 7:14,639,017-14,639,797 | - | C1H7g03824 | C2H7g22225 | LOC_Os07g30220 | Os07g0485600 | - | Detail |
| CX7g050000 | 7:14,641,635-14,651,188 | + | C1H7g24847 | C2H7g21520 | LOC_Os07g30240 | Os07g0486000 | OsMSH4, MSH4 | Detail |
| CX7g046844 | 7:14,652,595-14,658,899 | - | C1H7g29218 | C2H7g19758 | LOC_Os07g30250 | Os07g0486100 | - | Detail |
| CX7g046530 | 7:14,659,294-14,659,467 | - | - | - | - | - | - | Detail |