| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g20387 | 3:13,183,970-13,190,367 | + | C1H3g21733 | CX3g025812 | LOC_Os03g26090 | Os03g0378200 | - | Detail |
| C2H3g06097 | 3:13,203,470-13,204,506 | - | C1H3g27600 | - | - | - | - | Detail |
| C2H3g12084 | 3:13,223,253-13,227,579 | + | C1H3g28191 | CX3g029246 | LOC_Os03g26200 | Os03g0379100 | - | Detail |
| C2H3g20720 | 3:13,230,232-13,232,208 | + | C1H3g18201 | CX3g024992 | LOC_Os03g26210 | Os03g0379300 | OsIRO3 | Detail |
| C2H3g11313 | 3:13,232,882-13,234,915 | - | C1H3g08145 | CX3g025371 | LOC_Os03g26220 | Os03g0379400 | - | Detail |
| C2H3g22224 | 3:13,236,634-13,238,615 | + | C1H3g10024 | CX3g029639 | LOC_Os03g26229 | Os03g0379500 | - | Detail |
| C2H3g19366 | 3:13,241,803-13,254,515 | + | C1H3g30785 | CX3g025942 | LOC_Os03g26250 | Os03g0379801 | - | Detail |
| C2H3g00664 | 3:13,260,219-13,260,905 | + | C1H3g18376 | - | LOC_Os03g26280 | - | - | Detail |
| C2H3g03694 | 3:13,260,971-13,262,607 | + | - | - | - | - | - | Detail |
| C2H3g28235 | 3:13,283,508-13,284,098 | + | C1H3g29984 | CX3g026401 | LOC_Os03g26370 | Os03g0380700 | OsRING113 | Detail |
| C2H3g08469 | 3:13,295,470-13,296,555 | - | - | CX3g025287 | LOC_Os04g40250 | - | - | Detail |
| C2H3g10036 | 3:13,316,181-13,317,738 | - | C1H3g09234 | CX3g026850 | LOC_Os03g26430 | Os03g0381000 | - | Detail |
| C2H3g18489 | 3:13,319,290-13,325,754 | + | C1H3g09560 | CX3g026175 | LOC_Os03g26440 | Os03g0381100 | - | Detail |
| C2H3g11401 | 3:13,328,523-13,331,749 | + | C1H3g28910 | CX3g027360 | LOC_Os03g26450 | Os03g0381200 | - | Detail |
| C2H3g07469 | 3:13,332,161-13,334,191 | - | C1H3g07176 | CX3g027436 | LOC_Os03g26460 | Os03g0381300 | - | Detail |
| C2H3g11622 | 3:13,337,366-13,339,990 | + | C1H3g24130 | CX3g031147 | LOC_Os03g26480 | - | - | Detail |
| C2H3g11438 | 3:13,340,399-13,341,078 | - | C1H3g07262 | CX3g028361 | LOC_Os03g26490 | Os03g0381500 | - | Detail |
| C2H3g10080 | 3:13,436,061-13,442,271 | - | C1H3g01880 | CX3g027430 | LOC_Os03g26630 | Os03g0383800 | - | Detail |
| C2H3g28106 | 3:13,446,576-13,447,205 | + | C1H3g04987 | CX3g027286 | LOC_Os03g26650 | Os03g0383900 | - | Detail |
| C2H3g18257 | 3:13,484,680-13,486,086 | - | C1H3g24446 | CX3g030150 | LOC_Os03g26680 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002966 | 1:27,008,030-27,008,386 | - | - | C2H4g07090 | LOC_Os01g45970 | Os01g0647800 | - | Detail |
| CX1g004747 | 1:27,012,949-27,022,154 | + | C1H1g18463 | C2H1g05862 | LOC_Os01g52560 | Os01g0724500 | - | Detail |
| CX1g002092 | 1:27,024,032-27,024,586 | + | - | C2H1g15809 | LOC_Os01g52570 | Os01g0724700 | - | Detail |
| CX1g002347 | 1:27,041,517-27,046,500 | + | C1H1g09116 | C2H1g26023 | LOC_Os01g52610 | Os01g0725400 | - | Detail |
| CX1g003740 | 1:27,047,388-27,050,712 | + | C1H1g01881 | C2H1g19762 | LOC_Os01g52630 | Os01g0725600 | - | Detail |
| CX1g000922 | 1:27,054,926-27,059,842 | + | C1H1g28016 | C2H1g12468 | LOC_Os01g52640 | Os01g0725800 | - | Detail |
| CX1g004829 | 1:27,060,560-27,061,159 | - | C1H1g01009 | C2H1g25269 | LOC_Os01g52650 | Os01g0725900 | - | Detail |
| CX1g001737 | 1:27,064,005-27,064,734 | - | C1H1g26602 | C2H1g28455 | LOC_Os01g52660 | Os01g0726100 | - | Detail |
| CX1g000027 | 1:27,069,523-27,072,021 | - | C1H1g07505 | C2H1g28242 | LOC_Os01g52680 | Os01g0726400 | MADS32, OsMADS32, CFO1, CFO1/OsMADS32, TRI1 | Detail |
| CX1g007145 | 1:27,082,819-27,084,991 | + | C1H1g17040 | C2H1g03941 | LOC_Os01g52690 | Os01g0726700 | - | Detail |
| CX1g003909 | 1:27,098,467-27,102,434 | + | C1H1g01057 | C2H1g23381 | LOC_Os01g52710 | Os01g0727100 | - | Detail |
| CX1g005872 | 1:27,105,284-27,108,286 | + | C1H1g19246 | C2H1g19647 | LOC_Os01g52720 | Os01g0727400 | - | Detail |
| CX1g007173 | 1:27,109,188-27,109,592 | - | C1H1g06433 | C2H1g16377 | LOC_Os01g52730 | Os01g0727500 | OsS40-7 | Detail |
| CX1g003015 | 1:27,113,685-27,114,971 | - | C1H1g12496 | C2H1g27626 | LOC_Os01g52740 | Os01g0727600 | - | Detail |
| CX1g000031 | 1:27,119,021-27,126,037 | - | C1H1g13959 | C2H1g06165 | LOC_Os01g52750 | Os01g0727800 | - | Detail |
| CX1g000775 | 1:27,128,478-27,130,072 | + | C1H1g03195 | C2H1g10283 | LOC_Os01g52760 | Os01g0727900 | - | Detail |
| CX1g000699 | 1:27,138,703-27,140,438 | + | C1H1g13378 | C2H1g05247 | LOC_Os01g52770 | Os01g0728100 | - | Detail |
| CX1g005271 | 1:27,141,050-27,142,179 | - | C1H1g24144 | C2H1g01766 | LOC_Os01g52780 | Os01g0728150 | - | Detail |
| CX1g006621 | 1:27,143,137-27,147,292 | - | C1H1g11513 | C2H1g04992 | LOC_Os01g52780 | Os01g0728200 | - | Detail |
| CX1g004951 | 1:27,148,586-27,148,795 | - | - | - | - | - | - | Detail |