| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g18398 | 5:4,105,017-4,109,120 | + | C2H5g11480 | CX5g037016 | LOC_Os05g08960 | Os05g0182500 | - | Detail |
| C1H5g07949 | 5:4,109,874-4,115,446 | + | C2H5g27795 | CX5g038948 | LOC_Os05g08970 | Os05g0182600 | - | Detail |
| C1H5g02741 | 5:4,117,676-4,122,690 | + | C2H5g12653 | CX5g038774 | LOC_Os05g08980 | Os05g0182700 | - | Detail |
| C1H5g31761 | 5:4,123,425-4,128,459 | - | C2H5g24936 | CX5g038370 | LOC_Os05g08990 | Os05g0182800 | - | Detail |
| C1H5g15058 | 5:4,131,028-4,134,251 | - | C2H5g16852 | CX5g038370 | LOC_Os05g09000 | Os05g0182900 | - | Detail |
| C1H5g08045 | 5:4,139,611-4,140,737 | - | C2H5g21678 | CX5g036910 | LOC_Os05g09020 | Os05g0183100 | OsWRKY67 | Detail |
| C1H5g24536 | 5:4,153,586-4,157,274 | - | C2H5g08140 | CX5g039532 | LOC_Os05g09050 | Os05g0183300 | OsMLO12 | Detail |
| C1H5g06520 | 5:4,157,468-4,158,376 | - | C2H5g18635 | CX5g037375 | - | Os05g0183300 | OsMLO12 | Detail |
| C1H5g06253 | 5:4,186,575-4,188,026 | + | C2H5g23393 | CX5g039725 | LOC_Os05g09150 | Os05g0183900 | - | Detail |
| C1H5g08022 | 5:4,203,737-4,204,213 | + | C2H5g21425 | CX5g039725 | LOC_Os05g09240 | Os05g0184500 | - | Detail |
| C1H5g00334 | 5:4,220,060-4,220,622 | - | C2H5g09509 | - | - | - | - | Detail |
| C1H5g14479 | 5:4,222,831-4,224,267 | - | C2H5g17497 | CX5g040488 | LOC_Os05g09280 | Os05g0184901 | - | Detail |
| C1H5g18334 | 5:4,247,914-4,259,948 | + | C2H5g02956 | CX5g041051 | LOC_Os05g09360 | Os05g0185650 | - | Detail |
| C1H5g09420 | 5:4,265,465-4,269,928 | - | C2H5g29013 | CX5g037169 | LOC_Os05g09370 | - | - | Detail |
| C1H5g18900 | 5:4,271,867-4,273,109 | - | C2H5g25713 | CX5g038482 | - | Os05g0185700 | - | Detail |
| C1H5g05974 | 5:4,274,908-4,278,681 | + | C2H5g18224 | CX5g038289 | LOC_Os05g09380 | Os05g0185800 | - | Detail |
| C1H5g28043 | 5:4,281,504-4,282,215 | - | C2H5g05596 | CX5g040038 | LOC_Os05g09400 | Os05g0186000 | - | Detail |
| C1H5g30722 | 5:4,283,067-4,285,046 | - | C2H5g21372 | CX5g037460 | LOC_Os05g09410 | Os05g0186100 | - | Detail |
| C1H5g29951 | 5:4,296,225-4,299,362 | - | C2H5g01818 | CX5g040773 | LOC_Os05g09440 | Os05g0186300 | OscytME2 | Detail |
| C1H5g15338 | 5:4,326,778-4,327,958 | + | C2H5g14302 | CX5g038771 | LOC_Os05g09480 | Os05g0186900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002966 | 1:27,008,030-27,008,386 | - | - | C2H4g07090 | LOC_Os01g45970 | Os01g0647800 | - | Detail |
| CX1g004747 | 1:27,012,949-27,022,154 | + | C1H1g18463 | C2H1g05862 | LOC_Os01g52560 | Os01g0724500 | - | Detail |
| CX1g002092 | 1:27,024,032-27,024,586 | + | - | C2H1g15809 | LOC_Os01g52570 | Os01g0724700 | - | Detail |
| CX1g002347 | 1:27,041,517-27,046,500 | + | C1H1g09116 | C2H1g26023 | LOC_Os01g52610 | Os01g0725400 | - | Detail |
| CX1g003740 | 1:27,047,388-27,050,712 | + | C1H1g01881 | C2H1g19762 | LOC_Os01g52630 | Os01g0725600 | - | Detail |
| CX1g000922 | 1:27,054,926-27,059,842 | + | C1H1g28016 | C2H1g12468 | LOC_Os01g52640 | Os01g0725800 | - | Detail |
| CX1g004829 | 1:27,060,560-27,061,159 | - | C1H1g01009 | C2H1g25269 | LOC_Os01g52650 | Os01g0725900 | - | Detail |
| CX1g001737 | 1:27,064,005-27,064,734 | - | C1H1g26602 | C2H1g28455 | LOC_Os01g52660 | Os01g0726100 | - | Detail |
| CX1g000027 | 1:27,069,523-27,072,021 | - | C1H1g07505 | C2H1g28242 | LOC_Os01g52680 | Os01g0726400 | MADS32, OsMADS32, CFO1, CFO1/OsMADS32, TRI1 | Detail |
| CX1g007145 | 1:27,082,819-27,084,991 | + | C1H1g17040 | C2H1g03941 | LOC_Os01g52690 | Os01g0726700 | - | Detail |
| CX1g003909 | 1:27,098,467-27,102,434 | + | C1H1g01057 | C2H1g23381 | LOC_Os01g52710 | Os01g0727100 | - | Detail |
| CX1g005872 | 1:27,105,284-27,108,286 | + | C1H1g19246 | C2H1g19647 | LOC_Os01g52720 | Os01g0727400 | - | Detail |
| CX1g007173 | 1:27,109,188-27,109,592 | - | C1H1g06433 | C2H1g16377 | LOC_Os01g52730 | Os01g0727500 | OsS40-7 | Detail |
| CX1g003015 | 1:27,113,685-27,114,971 | - | C1H1g12496 | C2H1g27626 | LOC_Os01g52740 | Os01g0727600 | - | Detail |
| CX1g000031 | 1:27,119,021-27,126,037 | - | C1H1g13959 | C2H1g06165 | LOC_Os01g52750 | Os01g0727800 | - | Detail |
| CX1g000775 | 1:27,128,478-27,130,072 | + | C1H1g03195 | C2H1g10283 | LOC_Os01g52760 | Os01g0727900 | - | Detail |
| CX1g000699 | 1:27,138,703-27,140,438 | + | C1H1g13378 | C2H1g05247 | LOC_Os01g52770 | Os01g0728100 | - | Detail |
| CX1g005271 | 1:27,141,050-27,142,179 | - | C1H1g24144 | C2H1g01766 | LOC_Os01g52780 | Os01g0728150 | - | Detail |
| CX1g006621 | 1:27,143,137-27,147,292 | - | C1H1g11513 | C2H1g04992 | LOC_Os01g52780 | Os01g0728200 | - | Detail |
| CX1g004951 | 1:27,148,586-27,148,795 | - | - | - | - | - | - | Detail |