| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g12168 | 2:31,736,917-31,739,125 | + | C2H2g15313 | CX2g019555 | LOC_Os02g56700 | Os02g0811800 | OsCCR10 | Detail |
| C1H2g01325 | 2:31,740,230-31,740,869 | - | C2H2g23157 | - | LOC_Os02g46300 | Os02g0811902 | - | Detail |
| C1H2g10464 | 2:31,742,310-31,743,894 | + | C2H2g09312 | CX2g024617 | LOC_Os02g56720 | Os02g0812000 | - | Detail |
| C1H2g05404 | 2:31,748,738-31,757,287 | + | C2H2g19326 | CX2g024879 | LOC_Os02g56740 | Os02g0812400 | - | Detail |
| C1H2g10963 | 2:31,758,666-31,760,820 | + | C2H2g02254 | CX2g023091 | LOC_Os02g56750 | Os02g0812500 | - | Detail |
| C1H2g03230 | 2:31,762,377-31,766,397 | + | C2H2g09710 | CX2g023091 | LOC_Os02g56760 | Os02g0812600 | - | Detail |
| C1H2g07056 | 2:31,766,489-31,768,453 | + | C2H2g19171 | CX2g023091 | LOC_Os02g56800 | Os02g0812700 | - | Detail |
| C1H2g00231 | 2:31,771,702-31,773,544 | + | C2H2g28532 | CX2g023091 | LOC_Os02g56810 | Os02g0813083 | - | Detail |
| C1H2g26554 | 2:31,775,160-31,775,381 | + | C2H2g15955 | CX2g023249 | LOC_Os02g56820 | Os02g0812600 | - | Detail |
| C1H2g30055 | 2:31,778,369-31,781,518 | + | C2H2g15955 | CX2g023249 | LOC_Os02g56820 | Os02g0813000 | - | Detail |
| C1H2g14316 | 2:31,781,804-31,782,883 | + | C2H2g28568 | CX2g023249 | LOC_Os02g56820 | Os02g0813166 | - | Detail |
| C1H2g25793 | 2:31,786,177-31,787,244 | + | C2H2g25608 | CX2g023249 | LOC_Os02g56840 | Os02g0813350 | - | Detail |
| C1H2g01150 | 2:31,787,648-31,788,043 | + | C2H2g25608 | CX2g023091 | LOC_Os02g56840 | Os02g0813350 | - | Detail |
| C1H2g13338 | 2:31,790,001-31,795,459 | + | C2H2g15090 | CX2g022536 | LOC_Os02g56850 | Os02g0813500 | - | Detail |
| C1H2g08319 | 2:31,813,603-31,822,320 | - | C2H2g05971 | CX2g019469 | LOC_Os02g56880 | Os02g0813800 | - | Detail |
| C1H2g07591 | 2:31,828,112-31,828,988 | - | C2H2g25448 | CX2g020760 | LOC_Os02g56900 | Os02g0814000 | - | Detail |
| C1H2g24252 | 2:31,831,105-31,837,050 | - | C2H2g26120 | CX2g020572 | LOC_Os02g56910 | Os02g0814100 | - | Detail |
| C1H2g00197 | 2:31,838,250-31,842,164 | - | C2H2g25119 | CX2g021462 | LOC_Os02g56920 | Os02g0814200 | - | Detail |
| C1H2g09332 | 2:31,852,015-31,852,587 | - | C2H7g04062 | CX8g051856 | - | - | - | Detail |
| C1H2g20033 | 2:31,852,690-31,853,359 | - | C2H7g18912 | CX2g022162 | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002966 | 1:27,008,030-27,008,386 | - | - | C2H4g07090 | LOC_Os01g45970 | Os01g0647800 | - | Detail |
| CX1g004747 | 1:27,012,949-27,022,154 | + | C1H1g18463 | C2H1g05862 | LOC_Os01g52560 | Os01g0724500 | - | Detail |
| CX1g002092 | 1:27,024,032-27,024,586 | + | - | C2H1g15809 | LOC_Os01g52570 | Os01g0724700 | - | Detail |
| CX1g002347 | 1:27,041,517-27,046,500 | + | C1H1g09116 | C2H1g26023 | LOC_Os01g52610 | Os01g0725400 | - | Detail |
| CX1g003740 | 1:27,047,388-27,050,712 | + | C1H1g01881 | C2H1g19762 | LOC_Os01g52630 | Os01g0725600 | - | Detail |
| CX1g000922 | 1:27,054,926-27,059,842 | + | C1H1g28016 | C2H1g12468 | LOC_Os01g52640 | Os01g0725800 | - | Detail |
| CX1g004829 | 1:27,060,560-27,061,159 | - | C1H1g01009 | C2H1g25269 | LOC_Os01g52650 | Os01g0725900 | - | Detail |
| CX1g001737 | 1:27,064,005-27,064,734 | - | C1H1g26602 | C2H1g28455 | LOC_Os01g52660 | Os01g0726100 | - | Detail |
| CX1g000027 | 1:27,069,523-27,072,021 | - | C1H1g07505 | C2H1g28242 | LOC_Os01g52680 | Os01g0726400 | MADS32, OsMADS32, CFO1, CFO1/OsMADS32, TRI1 | Detail |
| CX1g007145 | 1:27,082,819-27,084,991 | + | C1H1g17040 | C2H1g03941 | LOC_Os01g52690 | Os01g0726700 | - | Detail |
| CX1g003909 | 1:27,098,467-27,102,434 | + | C1H1g01057 | C2H1g23381 | LOC_Os01g52710 | Os01g0727100 | - | Detail |
| CX1g005872 | 1:27,105,284-27,108,286 | + | C1H1g19246 | C2H1g19647 | LOC_Os01g52720 | Os01g0727400 | - | Detail |
| CX1g007173 | 1:27,109,188-27,109,592 | - | C1H1g06433 | C2H1g16377 | LOC_Os01g52730 | Os01g0727500 | OsS40-7 | Detail |
| CX1g003015 | 1:27,113,685-27,114,971 | - | C1H1g12496 | C2H1g27626 | LOC_Os01g52740 | Os01g0727600 | - | Detail |
| CX1g000031 | 1:27,119,021-27,126,037 | - | C1H1g13959 | C2H1g06165 | LOC_Os01g52750 | Os01g0727800 | - | Detail |
| CX1g000775 | 1:27,128,478-27,130,072 | + | C1H1g03195 | C2H1g10283 | LOC_Os01g52760 | Os01g0727900 | - | Detail |
| CX1g000699 | 1:27,138,703-27,140,438 | + | C1H1g13378 | C2H1g05247 | LOC_Os01g52770 | Os01g0728100 | - | Detail |
| CX1g005271 | 1:27,141,050-27,142,179 | - | C1H1g24144 | C2H1g01766 | LOC_Os01g52780 | Os01g0728150 | - | Detail |
| CX1g006621 | 1:27,143,137-27,147,292 | - | C1H1g11513 | C2H1g04992 | LOC_Os01g52780 | Os01g0728200 | - | Detail |
| CX1g004951 | 1:27,148,586-27,148,795 | - | - | - | - | - | - | Detail |