| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g20432 | 3:23,585,037-23,588,691 | - | C1H3g21434 | CX3g028229 | LOC_Os03g45210 | Os03g0654700 | - | Detail |
| C2H3g04155 | 3:23,600,729-23,602,681 | + | C1H3g03001 | CX3g030222 | LOC_Os03g45250 | Os03g0655100 | - | Detail |
| C2H3g05571 | 3:23,607,056-23,610,583 | - | C1H3g21386 | CX3g026925 | LOC_Os03g45260 | Os03g0655200 | - | Detail |
| C2H3g24615 | 3:23,610,990-23,614,658 | + | C1H3g23268 | CX3g028778 | LOC_Os03g45270 | Os03g0655300 | - | Detail |
| C2H3g23456 | 3:23,631,773-23,638,477 | + | C1H3g00444 | CX3g028152 | LOC_Os03g45300 | Os03g0655600 | - | Detail |
| C2H3g28256 | 3:23,640,616-23,644,779 | + | C1H3g21969 | CX3g025231 | LOC_Os03g45320 | Os03g0655700 | - | Detail |
| C2H3g14608 | 3:23,647,676-23,649,311 | - | C1H3g09602 | CX3g027791 | LOC_Os03g45330 | Os03g0656000 | - | Detail |
| C2H3g05055 | 3:23,651,160-23,651,465 | - | C1H3g03391 | CX3g027791 | LOC_Os03g45330 | - | - | Detail |
| C2H3g02509 | 3:23,654,640-23,655,636 | - | C1H3g13910 | CX3g027133 | LOC_Os03g45340 | Os03g0656100 | - | Detail |
| C2H3g14304 | 3:23,656,680-23,658,768 | - | C1H3g27575 | CX3g025575 | LOC_Os03g45344 | Os03g0656201 | - | Detail |
| C2H3g22997 | 3:23,667,639-23,668,233 | - | C1H3g27714 | - | - | - | - | Detail |
| C2H3g22826 | 3:23,668,285-23,668,893 | - | C1H3g10858 | - | - | - | - | Detail |
| C2H3g19499 | 3:23,678,293-23,680,818 | + | C1H3g06767 | CX3g026686 | LOC_Os03g45390 | Os03g0656800 | - | Detail |
| C2H3g07189 | 3:23,681,103-23,684,844 | + | C1H3g05969 | CX3g028225 | LOC_Os03g45400 | Os03g0656900 | NUS1, V1, V<sub>1</sub> | Detail |
| C2H3g10811 | 3:23,686,607-23,690,057 | + | C1H3g09225 | CX3g030227 | LOC_Os03g45410 | Os03g0657000 | OsTBP2 | Detail |
| C2H3g07935 | 3:23,690,699-23,693,833 | - | C1H3g18850 | CX3g030290 | LOC_Os03g45420 | Os03g0657100 | - | Detail |
| C2H3g03419 | 3:23,703,230-23,703,742 | - | C1H3g02435 | CX3g029382 | LOC_Os03g45450 | Os03g0657400 | - | Detail |
| C2H3g15251 | 3:23,720,428-23,724,470 | - | C1H3g24167 | CX3g028666 | LOC_Os03g45619 | Os03g0658800 | - | Detail |
| C2H3g22074 | 3:23,725,391-23,727,032 | - | C1H3g24167 | CX3g028381 | LOC_Os03g45519 | Os03g0658000 | - | Detail |
| C2H3g00755 | 3:23,727,908-23,728,816 | - | C1H3g12006 | CX3g028666 | LOC_Os03g45519 | Os03g0658000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g049738 | 7:12,658,629-12,665,255 | - | C1H7g09402 | C2H7g17928 | LOC_Os07g26490 | Os07g0446100 | - | Detail |
| CX7g049749 | 7:12,698,016-12,698,498 | + | - | - | LOC_Os05g48830 | - | - | Detail |
| CX7g046802 | 7:12,760,133-12,761,434 | + | C1H7g03755 | C2H7g12253 | LOC_Os07g26540 | Os07g0446800 | OsHXK1 | Detail |
| CX7g047444 | 7:12,766,154-12,769,541 | - | C1H7g30743 | C2H7g26716 | LOC_Os07g26560 | Os07g0447000 | - | Detail |
| CX7g046361 | 7:12,792,271-12,792,441 | - | C1H7g27839 | C2H7g17685 | LOC_Os07g26600 | Os07g0447200 | - | Detail |
| CX7g046302 | 7:12,803,192-12,807,743 | + | C1H7g10421 | C2H7g16004 | LOC_Os07g26610 | Os07g0447800 | - | Detail |
| CX7g047860 | 7:12,819,925-12,821,004 | + | C1H7g19669 | C2H7g29828 | LOC_Os07g26630 | Os07g0448100 | OsPIP2;4 | Detail |
| CX7g048399 | 7:12,827,750-12,828,817 | + | C1H7g02013 | C2H7g04872 | LOC_Os07g26630 | Os07g0448100 | OsPIP2;4 | Detail |
| CX7g049385 | 7:12,836,211-12,837,293 | + | C1H7g13570 | C2H7g25955 | LOC_Os07g26660 | Os07g0448100 | OsPIP2;4 | Detail |
| CX7g049950 | 7:12,865,976-12,868,860 | + | C1H7g11593 | C2H7g26880 | LOC_Os07g26690 | Os07g0448800 | - | Detail |
| CX7g050322 | 7:12,877,776-12,879,161 | - | C1H7g07851 | C2H7g23663 | LOC_Os07g26700 | Os07g0449100 | - | Detail |
| CX7g049974 | 7:12,891,405-12,891,566 | + | - | C2H9g13000 | - | - | - | Detail |
| CX7g049210 | 7:12,898,787-12,898,975 | - | - | - | LOC_Os06g34770 | - | - | Detail |
| CX7g049783 | 7:12,903,465-12,904,932 | + | C1H7g22458 | C2H7g19396 | LOC_Os07g26720 | Os07g0449700 | RR7, rr7, OsRR7, Rra5, OsRRA5 | Detail |
| CX7g049510 | 7:12,917,457-12,919,459 | + | C1H7g28266 | C2H7g11079 | LOC_Os07g26740 | Os07g0523500 | - | Detail |
| CX7g046127 | 7:12,934,761-12,937,296 | + | - | C2H7g27915 | - | Os07g0212400 | - | Detail |
| CX7g046188 | 7:12,948,665-12,949,189 | + | - | - | - | - | - | Detail |
| CX7g049967 | 7:12,959,982-12,960,131 | - | - | - | - | - | - | Detail |
| CX7g046487 | 7:12,964,655-12,965,152 | + | - | - | LOC_Os07g28730 | - | - | Detail |
| CX7g047914 | 7:12,965,180-12,965,371 | - | - | - | - | - | - | Detail |