| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g09038 | 4:2,368,447-2,370,528 | - | C2H4g20001 | CX4g036649 | LOC_Os04g06900 | Os04g0152000 | - | Detail |
| C1H4g13377 | 4:2,368,468-2,369,124 | + | C2H4g19138 | - | - | - | - | Detail |
| C1H4g20470 | 4:2,369,690-2,370,555 | + | C2H4g24428 | CX4g033304 | - | Os04g0137550 | - | Detail |
| C1H4g26592 | 4:2,372,045-2,376,221 | - | C2H4g26531 | CX4g033840 | LOC_Os04g06850 | Os04g0152500 | - | Detail |
| C1H4g30768 | 4:2,462,482-2,465,658 | + | C2H4g06170 | CX4g036649 | LOC_Os04g06900 | Os04g0153000 | - | Detail |
| C1H4g02137 | 4:2,473,554-2,475,488 | + | C2H4g17942 | CX4g035962 | LOC_Os04g06840 | Os04g0152400 | - | Detail |
| C1H4g29986 | 4:2,505,361-2,506,881 | + | C2H4g06170 | CX4g036649 | LOC_Os04g06990 | Os04g0154000 | - | Detail |
| C1H4g03719 | 4:2,507,006-2,507,837 | + | - | - | LOC_Os04g06990 | Os04g0154000 | - | Detail |
| C1H4g30206 | 4:2,646,594-2,646,917 | + | - | CX4g035403 | LOC_Os01g64949 | Os01g0869750 | - | Detail |
| C1H4g27704 | 4:2,647,222-2,650,382 | - | C2H4g30305 | CX4g034065 | LOC_Os01g63380 | Os04g0127900 | - | Detail |
| C1H4g11471 | 4:2,709,370-2,714,460 | + | C2H4g24610 | CX4g034079 | LOC_Os04g07890 | Os04g0155200 | - | Detail |
| C1H4g30323 | 4:2,721,108-2,722,316 | + | C2H4g20575 | CX4g031884 | LOC_Os04g07920 | Os04g0161400 | - | Detail |
| C1H4g00067 | 4:2,724,345-2,725,017 | - | C2H4g00652 | CX4g033462 | LOC_Os04g07970 | - | - | Detail |
| C1H4g27809 | 4:2,729,942-2,732,320 | + | C2H4g21151 | CX4g033812 | LOC_Os04g09770 | Os04g0161850 | - | Detail |
| C1H4g16605 | 4:2,747,094-2,749,142 | + | C2H4g06170 | CX4g035506 | LOC_Os04g12110 | Os04g0156000 | - | Detail |
| C1H4g23976 | 4:2,752,825-2,754,993 | + | C2H4g17942 | CX4g034341 | LOC_Os04g08200 | Os04g0154800 | - | Detail |
| C1H4g14091 | 4:2,764,324-2,766,127 | + | C2H4g16966 | CX4g033942 | LOC_Os04g07830 | Os04g0155000 | - | Detail |
| C1H4g18551 | 4:2,768,475-2,772,969 | + | C2H4g24610 | CX4g034079 | LOC_Os04g07890 | Os04g0155200 | - | Detail |
| C1H4g01636 | 4:2,777,107-2,779,072 | - | C2H4g15311 | CX4g033052 | LOC_Os04g09740 | Os06g0521000 | - | Detail |
| C1H4g01540 | 4:2,922,543-2,925,377 | + | C2H4g06576 | CX4g034079 | LOC_Os04g07890 | Os04g0155200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g049738 | 7:12,658,629-12,665,255 | - | C1H7g09402 | C2H7g17928 | LOC_Os07g26490 | Os07g0446100 | - | Detail |
| CX7g049749 | 7:12,698,016-12,698,498 | + | - | - | LOC_Os05g48830 | - | - | Detail |
| CX7g046802 | 7:12,760,133-12,761,434 | + | C1H7g03755 | C2H7g12253 | LOC_Os07g26540 | Os07g0446800 | OsHXK1 | Detail |
| CX7g047444 | 7:12,766,154-12,769,541 | - | C1H7g30743 | C2H7g26716 | LOC_Os07g26560 | Os07g0447000 | - | Detail |
| CX7g046361 | 7:12,792,271-12,792,441 | - | C1H7g27839 | C2H7g17685 | LOC_Os07g26600 | Os07g0447200 | - | Detail |
| CX7g046302 | 7:12,803,192-12,807,743 | + | C1H7g10421 | C2H7g16004 | LOC_Os07g26610 | Os07g0447800 | - | Detail |
| CX7g047860 | 7:12,819,925-12,821,004 | + | C1H7g19669 | C2H7g29828 | LOC_Os07g26630 | Os07g0448100 | OsPIP2;4 | Detail |
| CX7g048399 | 7:12,827,750-12,828,817 | + | C1H7g02013 | C2H7g04872 | LOC_Os07g26630 | Os07g0448100 | OsPIP2;4 | Detail |
| CX7g049385 | 7:12,836,211-12,837,293 | + | C1H7g13570 | C2H7g25955 | LOC_Os07g26660 | Os07g0448100 | OsPIP2;4 | Detail |
| CX7g049950 | 7:12,865,976-12,868,860 | + | C1H7g11593 | C2H7g26880 | LOC_Os07g26690 | Os07g0448800 | - | Detail |
| CX7g050322 | 7:12,877,776-12,879,161 | - | C1H7g07851 | C2H7g23663 | LOC_Os07g26700 | Os07g0449100 | - | Detail |
| CX7g049974 | 7:12,891,405-12,891,566 | + | - | C2H9g13000 | - | - | - | Detail |
| CX7g049210 | 7:12,898,787-12,898,975 | - | - | - | LOC_Os06g34770 | - | - | Detail |
| CX7g049783 | 7:12,903,465-12,904,932 | + | C1H7g22458 | C2H7g19396 | LOC_Os07g26720 | Os07g0449700 | RR7, rr7, OsRR7, Rra5, OsRRA5 | Detail |
| CX7g049510 | 7:12,917,457-12,919,459 | + | C1H7g28266 | C2H7g11079 | LOC_Os07g26740 | Os07g0523500 | - | Detail |
| CX7g046127 | 7:12,934,761-12,937,296 | + | - | C2H7g27915 | - | Os07g0212400 | - | Detail |
| CX7g046188 | 7:12,948,665-12,949,189 | + | - | - | - | - | - | Detail |
| CX7g049967 | 7:12,959,982-12,960,131 | - | - | - | - | - | - | Detail |
| CX7g046487 | 7:12,964,655-12,965,152 | + | - | - | LOC_Os07g28730 | - | - | Detail |
| CX7g047914 | 7:12,965,180-12,965,371 | - | - | - | - | - | - | Detail |