| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g00812 | 5:15,438,829-15,442,874 | + | C1H5g22192 | CX5g040874 | LOC_Os05g31680 | Os05g0381500 | - | Detail |
| C2H5g24506 | 5:15,472,095-15,472,628 | - | - | - | - | - | - | Detail |
| C2H5g04833 | 5:15,485,983-15,489,606 | + | C1H5g25084 | CX5g040022 | LOC_Os05g31720 | Os05g0382000 | - | Detail |
| C2H5g08328 | 5:15,493,949-15,497,950 | - | C1H5g14307 | CX5g037534 | LOC_Os05g31730 | Os05g0382200 | - | Detail |
| C2H5g19685 | 5:15,512,813-15,514,475 | - | C1H5g01406 | CX5g040387 | LOC_Os05g31750 | Os05g0382600 | - | Detail |
| C2H5g11708 | 5:15,518,256-15,520,181 | + | C1H5g16657 | CX5g039703 | LOC_Os05g31760 | Os05g0382900 | - | Detail |
| C2H5g06666 | 5:15,520,592-15,523,170 | - | C1H5g24084 | CX5g037302 | LOC_Os05g31770 | Os05g0383000 | - | Detail |
| C2H5g25307 | 5:15,525,153-15,529,489 | - | C1H5g11233 | CX5g037753 | LOC_Os05g31780 | Os05g0383100 | - | Detail |
| C2H5g14308 | 5:15,538,760-15,540,058 | - | - | - | - | - | - | Detail |
| C2H5g16202 | 5:15,574,736-15,576,724 | - | C1H5g19817 | CX5g036890 | LOC_Os05g31910 | Os05g0384600 | - | Detail |
| C2H5g16221 | 5:15,581,921-15,590,244 | - | C1H5g14350 | CX5g039660 | LOC_Os05g31920 | Os05g0384800 | - | Detail |
| C2H5g19197 | 5:15,627,469-15,627,897 | - | C1H5g06780 | - | - | - | - | Detail |
| C2H5g28340 | 5:15,627,496-15,632,018 | + | C1H5g04647 | CX5g037630 | LOC_Os05g32060 | Os05g0386000 | - | Detail |
| C2H5g02326 | 5:15,640,943-15,642,543 | - | C1H5g24020 | CX5g038141 | LOC_Os05g32070 | Os05g0386201 | - | Detail |
| C2H5g13761 | 5:15,664,361-15,665,056 | + | C1H5g12810 | CX5g038936 | LOC_Os05g32100 | Os05g0386400 | - | Detail |
| C2H5g24568 | 5:15,672,836-15,676,421 | - | C1H5g22229 | CX5g036682 | LOC_Os05g32110 | Os05g0386800 | - | Detail |
| C2H5g06485 | 5:15,681,898-15,684,506 | + | C1H5g03117 | CX5g040992 | LOC_Os05g32120 | Os05g0386900 | - | Detail |
| C2H5g23057 | 5:15,685,598-15,688,002 | + | C1H5g30528 | CX5g038566 | LOC_Os05g32130 | - | - | Detail |
| C2H5g24262 | 5:15,692,006-15,696,365 | + | C1H5g26112 | CX5g040130 | LOC_Os05g32140 | Os05g0387200 | - | Detail |
| C2H5g10291 | 5:15,698,097-15,698,435 | - | C1H5g08301 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g048001 | 7:12,245,994-12,252,440 | - | C1H7g12906 | C2H7g05830 | LOC_Os07g25740 | Os07g0439100 | - | Detail |
| CX7g048283 | 7:12,296,614-12,300,318 | - | - | C2H7g15710 | - | - | - | Detail |
| CX7g048314 | 7:12,314,457-12,314,663 | + | - | - | - | - | - | Detail |
| CX7g047704 | 7:12,331,477-12,335,538 | + | C1H7g00661 | C2H7g10158 | LOC_Os07g26000 | Os07g0163200 | - | Detail |
| CX7g049677 | 7:12,387,886-12,392,233 | + | C1H7g20476 | C2H7g03650 | - | Os07g0599100 | - | Detail |
| CX7g049480 | 7:12,395,115-12,395,300 | + | - | - | - | - | - | Detail |
| CX7g047100 | 7:12,400,666-12,401,084 | - | - | C2H1g23586 | - | - | - | Detail |
| CX7g049395 | 7:12,402,263-12,402,683 | - | - | - | - | - | - | Detail |
| CX7g048181 | 7:12,457,033-12,457,209 | - | - | - | LOC_Os12g19910 | - | - | Detail |
| CX7g047044 | 7:12,463,951-12,465,403 | + | C1H7g14823 | C2H7g09219 | LOC_Os07g26110 | Os07g0442900 | - | Detail |
| CX7g047359 | 7:12,468,330-12,469,908 | + | - | C2H7g15140 | - | Os07g0554400 | - | Detail |
| CX7g046450 | 7:12,484,076-12,484,312 | - | - | - | - | Os07g0464001 | - | Detail |
| CX7g047352 | 7:12,531,641-12,531,970 | - | - | - | - | Os08g0518600 | - | Detail |
| CX7g049138 | 7:12,549,529-12,549,990 | + | - | - | - | Os07g0542800 | - | Detail |
| CX7g047435 | 7:12,563,210-12,563,470 | - | C1H7g15110 | C2H7g30045 | - | Os07g0186000 | TRXH, trxh, Trx-H, OsTRXh1, OsTrxh1, Os1, OsTrx23, RPP13-1 | Detail |
| CX7g049983 | 7:12,587,013-12,595,072 | - | C1H7g22404 | C2H7g21033 | LOC_Os07g26210 | Os07g0444000 | - | Detail |
| CX7g046951 | 7:12,611,073-12,615,771 | + | C1H7g14611 | C2H7g15268 | LOC_Os07g29820 | Os07g0481400 | - | Detail |
| CX7g048800 | 7:12,620,599-12,626,476 | - | C1H7g17489 | C2H7g16091 | LOC_Os07g26440 | Os07g0445600 | - | Detail |
| CX7g046816 | 7:12,639,837-12,641,365 | + | C1H7g26287 | C2H7g21985 | LOC_Os07g26460 | Os07g0445800 | - | Detail |
| CX7g048464 | 7:12,645,512-12,646,954 | + | C1H7g01225 | C2H7g23639 | LOC_Os07g26480 | Os07g0446000 | - | Detail |