| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g20297 | 3:6,328,444-6,329,640 | + | C1H3g22268 | CX3g028385 | LOC_Os03g13180 | Os03g0234500 | - | Detail |
| C2H3g00447 | 3:6,331,411-6,336,088 | - | C1H3g22029 | CX3g027164 | LOC_Os03g13190 | Os03g0234600 | - | Detail |
| C2H3g06567 | 3:6,342,078-6,344,430 | - | C1H3g04582 | CX3g030874 | LOC_Os03g13200 | Os03g0234900 | - | Detail |
| C2H3g02755 | 3:6,345,923-6,347,636 | - | C1H3g27078 | CX3g029207 | LOC_Os03g13210 | Os03g0235000 | - | Detail |
| C2H3g08839 | 3:6,364,077-6,368,207 | + | C1H3g26089 | CX3g031242 | LOC_Os03g13220 | Os03g0235100 | - | Detail |
| C2H3g17418 | 3:6,369,273-6,371,201 | + | C1H3g13556 | CX3g025226 | LOC_Os03g13230 | Os03g0235200 | - | Detail |
| C2H3g00836 | 3:6,371,611-6,375,870 | - | C1H3g13432 | CX3g028197 | LOC_Os03g13240 | Os03g0235300 | - | Detail |
| C2H3g23746 | 3:6,376,693-6,380,628 | - | C1H3g17503 | CX3g027179 | LOC_Os03g13250 | Os03g0235700 | - | Detail |
| C2H3g02723 | 3:6,382,094-6,387,770 | - | C1H3g27354 | CX3g027179 | LOC_Os03g13274 | Os03g0235900 | - | Detail |
| C2H3g28344 | 3:6,399,499-6,402,406 | + | C1H3g10596 | CX3g025606 | LOC_Os03g13300 | Os03g0236200 | OsGAD3 | Detail |
| C2H3g11740 | 3:6,408,151-6,410,478 | - | C1H3g09841 | CX3g027825 | LOC_Os03g13340 | Os03g0236675 | - | Detail |
| C2H3g20390 | 3:6,411,350-6,411,985 | + | C1H3g26140 | CX3g027924 | LOC_Os03g13360 | Os03g0236800 | - | Detail |
| C2H3g08095 | 3:6,413,496-6,414,146 | + | C1H3g26595 | CX3g026764 | LOC_Os03g13370 | Os03g0236900 | - | Detail |
| C2H3g11238 | 3:6,416,401-6,424,841 | + | C1H3g30353 | CX3g030333 | LOC_Os03g13370 | Os03g0236966 | OsAPC6 | Detail |
| C2H3g29074 | 3:6,426,982-6,431,326 | + | C1H3g16967 | CX3g025761 | LOC_Os03g13380 | Os03g0237000 | - | Detail |
| C2H3g13980 | 3:6,433,298-6,435,531 | + | - | - | - | - | - | Detail |
| C2H3g28705 | 3:6,440,316-6,444,240 | - | C1H3g08429 | CX3g027254 | LOC_Os03g13400 | Os03g0237250 | OsIDD14, LPA1 | Detail |
| C2H3g29962 | 3:6,467,615-6,468,157 | + | C1H3g09361 | CX3g028559 | LOC_Os03g13450 | Os03g0237500 | - | Detail |
| C2H3g03025 | 3:6,471,256-6,477,248 | - | C1H3g17244 | CX3g028914 | LOC_Os03g13460 | Os03g0237600 | - | Detail |
| C2H3g23135 | 3:6,484,191-6,488,014 | - | C1H3g24201 | CX3g025055 | LOC_Os03g13480 | Os03g0237950 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g048001 | 7:12,245,994-12,252,440 | - | C1H7g12906 | C2H7g05830 | LOC_Os07g25740 | Os07g0439100 | - | Detail |
| CX7g048283 | 7:12,296,614-12,300,318 | - | - | C2H7g15710 | - | - | - | Detail |
| CX7g048314 | 7:12,314,457-12,314,663 | + | - | - | - | - | - | Detail |
| CX7g047704 | 7:12,331,477-12,335,538 | + | C1H7g00661 | C2H7g10158 | LOC_Os07g26000 | Os07g0163200 | - | Detail |
| CX7g049677 | 7:12,387,886-12,392,233 | + | C1H7g20476 | C2H7g03650 | - | Os07g0599100 | - | Detail |
| CX7g049480 | 7:12,395,115-12,395,300 | + | - | - | - | - | - | Detail |
| CX7g047100 | 7:12,400,666-12,401,084 | - | - | C2H1g23586 | - | - | - | Detail |
| CX7g049395 | 7:12,402,263-12,402,683 | - | - | - | - | - | - | Detail |
| CX7g048181 | 7:12,457,033-12,457,209 | - | - | - | LOC_Os12g19910 | - | - | Detail |
| CX7g047044 | 7:12,463,951-12,465,403 | + | C1H7g14823 | C2H7g09219 | LOC_Os07g26110 | Os07g0442900 | - | Detail |
| CX7g047359 | 7:12,468,330-12,469,908 | + | - | C2H7g15140 | - | Os07g0554400 | - | Detail |
| CX7g046450 | 7:12,484,076-12,484,312 | - | - | - | - | Os07g0464001 | - | Detail |
| CX7g047352 | 7:12,531,641-12,531,970 | - | - | - | - | Os08g0518600 | - | Detail |
| CX7g049138 | 7:12,549,529-12,549,990 | + | - | - | - | Os07g0542800 | - | Detail |
| CX7g047435 | 7:12,563,210-12,563,470 | - | C1H7g15110 | C2H7g30045 | - | Os07g0186000 | TRXH, trxh, Trx-H, OsTRXh1, OsTrxh1, Os1, OsTrx23, RPP13-1 | Detail |
| CX7g049983 | 7:12,587,013-12,595,072 | - | C1H7g22404 | C2H7g21033 | LOC_Os07g26210 | Os07g0444000 | - | Detail |
| CX7g046951 | 7:12,611,073-12,615,771 | + | C1H7g14611 | C2H7g15268 | LOC_Os07g29820 | Os07g0481400 | - | Detail |
| CX7g048800 | 7:12,620,599-12,626,476 | - | C1H7g17489 | C2H7g16091 | LOC_Os07g26440 | Os07g0445600 | - | Detail |
| CX7g046816 | 7:12,639,837-12,641,365 | + | C1H7g26287 | C2H7g21985 | LOC_Os07g26460 | Os07g0445800 | - | Detail |
| CX7g048464 | 7:12,645,512-12,646,954 | + | C1H7g01225 | C2H7g23639 | LOC_Os07g26480 | Os07g0446000 | - | Detail |