| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g26497 | 4:3,214,424-3,216,214 | - | C2H4g08785 | CX4g033688 | LOC_Os04g08290 | Os04g0165200 | ART2 | Detail |
| C1H4g15929 | 4:3,222,135-3,223,120 | + | - | CX4g033043 | LOC_Os04g08310 | Os04g0165300 | - | Detail |
| C1H4g20789 | 4:3,226,239-3,228,095 | - | C2H4g02342 | CX4g035325 | LOC_Os04g08320 | Os04g0165400 | - | Detail |
| C1H4g12785 | 4:3,230,389-3,230,700 | - | C2H4g19422 | CX4g035853 | LOC_Os04g08330 | Os04g0165500 | - | Detail |
| C1H4g31381 | 4:3,245,804-3,247,931 | + | C2H4g06874 | CX4g036241 | LOC_Os04g08340 | Os04g0165600 | - | Detail |
| C1H4g30280 | 4:3,250,393-3,254,434 | - | C2H4g04495 | CX4g034083 | LOC_Os04g08350 | Os04g0165700 | - | Detail |
| C1H4g18120 | 4:3,262,917-3,265,964 | - | C2H4g24204 | CX4g034989 | LOC_Os04g08390 | Os04g0166000 | - | Detail |
| C1H4g16596 | 4:3,291,349-3,296,428 | - | C2H4g25306 | CX4g036344 | LOC_Os04g08410 | Os04g0166400 | - | Detail |
| C1H4g13488 | 4:3,322,176-3,326,018 | + | C2H4g16904 | CX4g036063 | LOC_Os04g08450 | Os04g0166600 | OsSFL1 | Detail |
| C1H4g11999 | 4:3,334,056-3,336,300 | + | C2H4g26054 | CX4g033810 | LOC_Os04g08460 | - | - | Detail |
| C1H4g21471 | 4:3,370,486-3,373,209 | - | C2H4g21134 | CX4g033225 | LOC_Os04g08550 | Os04g0167800 | - | Detail |
| C1H4g06121 | 4:3,377,126-3,378,118 | - | C2H4g04423 | CX4g034291 | - | Os04g0167875 | - | Detail |
| C1H4g27562 | 4:3,381,940-3,384,383 | - | C2H4g12568 | CX4g034291 | - | Os04g0167900 | - | Detail |
| C1H4g05004 | 4:3,385,590-3,386,226 | - | C2H4g02316 | CX4g032052 | LOC_Os04g08570 | Os04g0168000 | - | Detail |
| C1H4g17104 | 4:3,407,004-3,407,471 | - | - | CX4g034069 | LOC_Os04g08600 | Os04g0168100 | SRO | Detail |
| C1H4g08725 | 4:3,467,959-3,468,944 | - | - | CX4g036254 | LOC_Os04g08730 | - | - | Detail |
| C1H4g12046 | 4:3,475,828-3,479,747 | + | C2H4g13508 | CX4g033888 | LOC_Os04g08740 | Os04g0169100 | ETR2, OsETR2, OS-ETR2, etr2, OsPK1, PK1, ERL1, OsERL1, OsERS3 | Detail |
| C1H4g26213 | 4:3,498,442-3,500,124 | - | C2H4g19627 | CX4g036277 | LOC_Os04g08764 | Os04g0169500 | - | Detail |
| C1H4g05807 | 4:3,567,302-3,569,530 | + | C2H4g04047 | CX4g034654 | LOC_Os04g08824 | Os04g0171600 | - | Detail |
| C1H4g06403 | 4:3,573,267-3,577,599 | + | C2H4g27784 | CX4g031382 | LOC_Os04g08828 | Os04g0171800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g049533 | 7:11,703,776-11,704,519 | + | - | C2H7g23963 | LOC_Os07g23640 | Os07g0418600 | OsRePRP2.2 | Detail |
| CX7g048142 | 7:11,724,858-11,726,402 | + | C1H7g27736 | C2H7g06661 | LOC_Os07g24050 | Os07g0422700 | - | Detail |
| CX7g046709 | 7:11,727,421-11,728,425 | + | C1H7g14828 | C2H7g28324 | LOC_Os07g24060 | Os07g0295000 | - | Detail |
| CX7g049786 | 7:11,732,734-11,733,960 | - | C1H7g20518 | C2H7g11380 | LOC_Os07g24090 | Os07g0423000 | OsML1 | Detail |
| CX7g048527 | 7:11,734,807-11,738,028 | + | C1H7g06060 | C2H7g20052 | LOC_Os11g15010 | Os11g0256400 | - | Detail |
| CX7g048166 | 7:11,738,708-11,739,185 | - | C1H7g12910 | C2H7g20417 | - | Os07g0103000 | - | Detail |
| CX7g047234 | 7:11,741,387-11,741,704 | - | - | - | - | - | - | Detail |
| CX7g048252 | 7:11,742,163-11,742,318 | - | - | - | - | - | - | Detail |
| CX7g046313 | 7:11,760,612-11,760,834 | - | - | - | - | Os07g0601900 | - | Detail |
| CX7g048962 | 7:11,787,321-11,792,053 | - | C1H7g00763 | C2H7g11256 | LOC_Os07g24190 | Os07g0424400 | - | Detail |
| CX7g047181 | 7:11,818,108-11,821,179 | - | C1H7g10096 | C2H7g20055 | LOC_Os07g24230 | Os07g0425000 | - | Detail |
| CX7g047563 | 7:11,887,781-11,888,377 | - | C1H7g11912 | C2H7g12121 | LOC_Os07g25370 | Os07g0434300 | Os2R_MYB69 | Detail |
| CX7g050309 | 7:11,892,142-11,892,750 | - | C1H7g19272 | C2H7g12121 | LOC_Os07g25370 | Os07g0434300 | Os2R_MYB69 | Detail |
| CX7g047469 | 7:11,899,177-11,899,785 | - | C1H7g28057 | C2H7g23918 | LOC_Os07g25370 | Os07g0434300 | Os2R_MYB69 | Detail |
| CX7g048119 | 7:11,903,837-11,909,831 | - | C1H7g21134 | C2H7g11299 | LOC_Os07g25390 | Os07g0434500 | OsCHR736, CHR736 | Detail |
| CX7g048832 | 7:11,918,244-11,920,009 | - | C1H7g14261 | C2H7g09063 | LOC_Os07g25410 | Os07g0434700 | - | Detail |
| CX7g050052 | 7:11,923,997-11,926,617 | - | C1H7g12803 | C2H7g08287 | LOC_Os07g25420 | Os07g0435100 | OsRpn12 | Detail |
| CX7g048648 | 7:11,929,903-11,930,575 | + | C1H7g24929 | C2H7g25536 | LOC_Os07g25430 | Os07g0435300 | - | Detail |
| CX7g049540 | 7:11,931,571-11,938,343 | - | C1H7g15359 | C2H7g18452 | LOC_Os07g25440 | Os07g0435400 | - | Detail |
| CX7g050337 | 7:11,940,146-11,940,358 | - | - | - | - | - | - | Detail |