| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g11980 | 11:23,269,893-23,274,611 | + | C2H11g00190 | CX11g011573 | LOC_Os11g44600 | Os11g0668300 | - | Detail |
| C1H11g00447 | 11:23,275,679-23,276,379 | - | C2H11g26573 | CX11g011679 | - | - | - | Detail |
| C1H11g21665 | 11:23,280,242-23,281,456 | - | C2H11g05220 | CX11g014592 | LOC_Os11g44630 | Os11g0668650 | - | Detail |
| C1H11g00851 | 11:23,327,753-23,330,443 | + | C2H11g12391 | CX11g013988 | LOC_Os11g44660 | Os11g0668800 | OsRLCK349 | Detail |
| C1H11g15400 | 11:23,456,348-23,457,121 | + | C2H11g16679 | CX11g014187 | LOC_Os11g44870 | Os11g0672300 | - | Detail |
| C1H11g20665 | 11:23,503,584-23,504,205 | + | C2H11g05077 | CX11g013089 | - | Os11g0594000 | OsSTP28 | Detail |
| C1H11g20975 | 11:23,505,825-23,515,602 | + | C2H11g05711 | CX11g013325 | - | Os11g0594000 | OsSTP28 | Detail |
| C1H11g18108 | 11:23,520,284-23,523,455 | + | C2H11g07931 | CX11g014938 | LOC_Os11g44690 | Os11g0669200 | OsRLCK350 | Detail |
| C1H11g30378 | 11:23,525,581-23,530,805 | + | C2H11g04907 | CX11g011862 | LOC_Os11g44700 | Os11g0669100 | COG3 | Detail |
| C1H11g10751 | 11:23,532,794-23,536,095 | + | C2H11g18937 | CX11g011862 | LOC_Os11g44690 | Os11g0669200 | OsRLCK350 | Detail |
| C1H11g26732 | 11:23,537,243-23,539,971 | + | C2H11g01187 | CX11g011862 | LOC_Os11g44750 | Os11g0670100 | - | Detail |
| C1H11g14218 | 11:23,547,330-23,547,929 | - | - | CX2g021222 | - | Os11g0256300 | - | Detail |
| C1H11g24253 | 11:23,548,732-23,550,972 | + | C2H11g19468 | CX9g056877 | LOC_Os11g44790 | Os11g0670700 | - | Detail |
| C1H11g31627 | 11:23,559,520-23,561,084 | - | C2H11g27080 | CX11g012522 | LOC_Os11g44810 | Os11g0671000 | OsDRM1 | Detail |
| C1H11g03521 | 11:23,573,114-23,576,081 | + | C2H11g23513 | CX11g012285 | LOC_Os11g44860 | Os11g0672200 | - | Detail |
| C1H11g11076 | 11:23,577,615-23,578,356 | - | - | CX11g013659 | - | - | - | Detail |
| C1H11g12664 | 11:23,577,628-23,579,636 | + | C2H11g26063 | - | - | - | - | Detail |
| C1H11g06806 | 11:23,581,003-23,583,672 | + | C2H11g25079 | CX11g012393 | LOC_Os11g44870 | Os11g0672300 | - | Detail |
| C1H11g05558 | 11:23,585,156-23,591,262 | - | C2H11g22308 | CX11g012777 | LOC_Os11g44880 | Os11g0672400 | - | Detail |
| C1H11g16900 | 11:23,596,983-23,601,365 | - | C2H11g18596 | CX11g012486 | LOC_Os11g44910 | Os11g0672700 | OsRecQ1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006432 | 1:26,869,510-26,873,725 | + | C1H1g09046 | C2H1g16044 | LOC_Os01g52270 | Os01g0720800 | - | Detail |
| CX1g000877 | 1:26,881,441-26,895,552 | + | C1H1g19609 | C2H1g05952 | LOC_Os01g52330 | Os01g0721300 | - | Detail |
| CX1g001695 | 1:26,907,153-26,910,006 | - | C1H1g16429 | C2H1g03938 | LOC_Os01g52390 | Os01g0721900 | - | Detail |
| CX1g000242 | 1:26,911,331-26,911,480 | - | C1H4g20138 | - | - | - | - | Detail |
| CX1g005554 | 1:26,913,570-26,917,668 | + | C1H1g19540 | C2H1g29212 | LOC_Os01g52400 | Os01g0722100 | - | Detail |
| CX1g004391 | 1:26,925,742-26,927,414 | + | C1H1g14417 | C2H1g15644 | LOC_Os01g52410 | Os01g0722300 | Os2R_MYB14 | Detail |
| CX1g002677 | 1:26,938,638-26,942,076 | + | C1H1g17552 | C2H1g14945 | LOC_Os01g52450 | Os01g0722700 | OsHXK9 | Detail |
| CX1g001570 | 1:26,946,405-26,949,202 | - | C1H1g17968 | C2H1g16107 | LOC_Os01g52470 | Os01g0723000 | - | Detail |
| CX1g004088 | 1:26,951,322-26,953,024 | + | C1H1g00329 | C2H1g09375 | LOC_Os01g52480 | Os01g0723100 | - | Detail |
| CX1g004240 | 1:26,953,804-26,955,294 | - | C1H1g27397 | C2H1g00282 | LOC_Os01g52490 | Os01g0723200 | - | Detail |
| CX1g000428 | 1:26,956,486-26,956,878 | + | - | - | - | - | - | Detail |
| CX1g005860 | 1:26,957,490-26,957,961 | + | - | - | - | - | - | Detail |
| CX1g001850 | 1:26,962,802-26,967,942 | + | C1H1g18013 | C2H1g25823 | LOC_Os01g52500 | Os01g0723400 | NADP-ME2, Os-NADP-ME2, Os-NADP-ME2-2 | Detail |
| CX1g003519 | 1:26,970,216-26,975,514 | + | C1H1g17264 | C2H1g08871 | LOC_Os01g52514 | Os01g0723500 | - | Detail |
| CX1g004209 | 1:26,977,205-26,981,174 | + | C1H1g03740 | C2H1g17638 | LOC_Os01g52530 | Os01g0723600 | - | Detail |
| CX1g005203 | 1:26,982,810-26,983,263 | - | C1H12g09894 | C2H8g28836 | - | - | - | Detail |
| CX1g004680 | 1:26,984,098-26,988,008 | + | C1H1g09315 | C2H1g22241 | LOC_Os01g52540 | Os01g0723700 | - | Detail |
| CX1g004575 | 1:26,988,399-26,994,528 | - | C1H1g17060 | C2H1g23039 | LOC_Os01g52550 | Os01g0723800 | - | Detail |
| CX1g004415 | 1:27,000,702-27,000,872 | + | - | - | - | - | - | Detail |
| CX1g003853 | 1:27,001,679-27,001,900 | + | - | - | LOC_Os01g49630 | Os01g0728000 | - | Detail |