| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g15163 | 6:10,909,527-10,910,436 | - | C2H6g26915 | CX6g041667 | LOC_Os06g22490 | Os06g0330400 | - | Detail |
| C1H6g09694 | 6:10,954,544-10,956,187 | + | C2H6g04886 | CX6g044761 | LOC_Os06g30500 | Os06g0500700 | - | Detail |
| C1H6g11051 | 6:10,965,151-10,966,143 | + | C2H6g22788 | CX6g044102 | LOC_Os06g30480 | Os06g0500300 | - | Detail |
| C1H6g28721 | 6:10,976,054-10,987,872 | + | C2H6g30055 | CX6g043386 | LOC_Os06g30460 | Os06g0499900 | - | Detail |
| C1H6g12504 | 6:10,992,445-10,995,760 | + | C2H6g17391 | CX6g045782 | LOC_Os06g30440 | Os06g0499500 | - | Detail |
| C1H6g27560 | 6:11,001,556-11,004,371 | + | C2H6g10972 | CX6g041652 | LOC_Os06g30420 | Os06g0499301 | - | Detail |
| C1H6g28317 | 6:11,019,202-11,025,947 | - | C2H6g00827 | CX6g043980 | LOC_Os06g30390 | Os06g0499000 | - | Detail |
| C1H6g05561 | 6:11,028,295-11,031,851 | - | C2H6g00485 | CX6g041677 | LOC_Os06g30380 | Os06g0498900 | - | Detail |
| C1H6g00209 | 6:11,037,216-11,039,505 | + | C2H6g17443 | CX6g043686 | LOC_Os06g30370 | Os06g0498800 | OsMFT1 | Detail |
| C1H6g25364 | 6:11,070,496-11,071,062 | + | C2H6g29118 | CX6g043303 | - | - | - | Detail |
| C1H6g18187 | 6:11,077,474-11,084,340 | - | C2H6g16872 | CX6g043053 | LOC_Os06g30320 | Os06g0498500 | - | Detail |
| C1H6g27568 | 6:11,089,003-11,100,261 | - | C2H6g24539 | CX6g041803 | LOC_Os06g30310 | Os06g0498400 | GWD1 | Detail |
| C1H6g26182 | 6:11,127,801-11,132,082 | - | C2H6g28212 | CX6g043036 | LOC_Os06g30210 | Os06g0497500 | - | Detail |
| C1H6g07599 | 6:11,146,507-11,148,404 | - | C2H6g12814 | CX6g042956 | LOC_Os06g30179 | Os06g0497350 | - | Detail |
| C1H6g09677 | 6:11,181,814-11,184,302 | - | C2H6g12911 | CX6g045078 | LOC_Os06g30130 | Os06g0496800 | - | Detail |
| C1H6g04894 | 6:11,209,923-11,210,907 | - | C2H6g25876 | CX6g041544 | LOC_Os06g30090 | Os06g0496400 | OsbHLH127, OsRSL3 | Detail |
| C1H6g31457 | 6:11,222,490-11,229,832 | - | C2H6g13439 | CX6g043076 | LOC_Os06g30060 | Os06g0496000 | - | Detail |
| C1H6g22414 | 6:11,242,696-11,243,706 | - | C2H6g00870 | CX6g043852 | LOC_Os06g30030 | Os06g0495800 | - | Detail |
| C1H6g11371 | 6:11,248,268-11,255,708 | - | C2H6g25334 | CX6g042382 | LOC_Os06g30020 | Os06g0495700 | - | Detail |
| C1H6g09138 | 6:11,258,987-11,261,280 | - | C2H6g17906 | CX6g045784 | LOC_Os06g29994 | Os06g0495500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006432 | 1:26,869,510-26,873,725 | + | C1H1g09046 | C2H1g16044 | LOC_Os01g52270 | Os01g0720800 | - | Detail |
| CX1g000877 | 1:26,881,441-26,895,552 | + | C1H1g19609 | C2H1g05952 | LOC_Os01g52330 | Os01g0721300 | - | Detail |
| CX1g001695 | 1:26,907,153-26,910,006 | - | C1H1g16429 | C2H1g03938 | LOC_Os01g52390 | Os01g0721900 | - | Detail |
| CX1g000242 | 1:26,911,331-26,911,480 | - | C1H4g20138 | - | - | - | - | Detail |
| CX1g005554 | 1:26,913,570-26,917,668 | + | C1H1g19540 | C2H1g29212 | LOC_Os01g52400 | Os01g0722100 | - | Detail |
| CX1g004391 | 1:26,925,742-26,927,414 | + | C1H1g14417 | C2H1g15644 | LOC_Os01g52410 | Os01g0722300 | Os2R_MYB14 | Detail |
| CX1g002677 | 1:26,938,638-26,942,076 | + | C1H1g17552 | C2H1g14945 | LOC_Os01g52450 | Os01g0722700 | OsHXK9 | Detail |
| CX1g001570 | 1:26,946,405-26,949,202 | - | C1H1g17968 | C2H1g16107 | LOC_Os01g52470 | Os01g0723000 | - | Detail |
| CX1g004088 | 1:26,951,322-26,953,024 | + | C1H1g00329 | C2H1g09375 | LOC_Os01g52480 | Os01g0723100 | - | Detail |
| CX1g004240 | 1:26,953,804-26,955,294 | - | C1H1g27397 | C2H1g00282 | LOC_Os01g52490 | Os01g0723200 | - | Detail |
| CX1g000428 | 1:26,956,486-26,956,878 | + | - | - | - | - | - | Detail |
| CX1g005860 | 1:26,957,490-26,957,961 | + | - | - | - | - | - | Detail |
| CX1g001850 | 1:26,962,802-26,967,942 | + | C1H1g18013 | C2H1g25823 | LOC_Os01g52500 | Os01g0723400 | NADP-ME2, Os-NADP-ME2, Os-NADP-ME2-2 | Detail |
| CX1g003519 | 1:26,970,216-26,975,514 | + | C1H1g17264 | C2H1g08871 | LOC_Os01g52514 | Os01g0723500 | - | Detail |
| CX1g004209 | 1:26,977,205-26,981,174 | + | C1H1g03740 | C2H1g17638 | LOC_Os01g52530 | Os01g0723600 | - | Detail |
| CX1g005203 | 1:26,982,810-26,983,263 | - | C1H12g09894 | C2H8g28836 | - | - | - | Detail |
| CX1g004680 | 1:26,984,098-26,988,008 | + | C1H1g09315 | C2H1g22241 | LOC_Os01g52540 | Os01g0723700 | - | Detail |
| CX1g004575 | 1:26,988,399-26,994,528 | - | C1H1g17060 | C2H1g23039 | LOC_Os01g52550 | Os01g0723800 | - | Detail |
| CX1g004415 | 1:27,000,702-27,000,872 | + | - | - | - | - | - | Detail |
| CX1g003853 | 1:27,001,679-27,001,900 | + | - | - | LOC_Os01g49630 | Os01g0728000 | - | Detail |