| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g21680 | 3:31,573,549-31,577,267 | - | C2H3g29438 | CX3g025915 | LOC_Os03g59450 | Os03g0809100 | - | Detail |
| C1H3g00029 | 3:31,578,427-31,580,804 | + | C2H3g20629 | CX3g029386 | LOC_Os03g59460 | Os03g0809200 | - | Detail |
| C1H3g24410 | 3:31,581,594-31,585,210 | - | C2H3g29142 | CX3g030061 | LOC_Os03g59470 | Os03g0809300 | - | Detail |
| C1H3g00154 | 3:31,585,689-31,590,452 | - | C2H3g26798 | CX3g026207 | LOC_Os03g59480 | Os03g0809400 | - | Detail |
| C1H3g24704 | 3:31,595,581-31,600,379 | + | C2H3g14868 | CX3g029129 | LOC_Os03g59530 | Os03g0809700 | - | Detail |
| C1H3g10761 | 3:31,601,003-31,602,117 | - | C2H3g12384 | CX3g029771 | LOC_Os03g59540 | Os03g0809800 | - | Detail |
| C1H3g08226 | 3:31,603,634-31,608,354 | + | C2H3g15000 | CX3g027672 | LOC_Os03g59550 | Os03g0809900 | OsY14b, Y14b, Tsunagi, RBM8 | Detail |
| C1H3g24094 | 3:31,614,612-31,615,670 | + | C2H3g26577 | CX3g030604 | LOC_Os03g59570 | Os03g0810100 | - | Detail |
| C1H3g21092 | 3:31,627,097-31,629,523 | - | C2H3g13200 | CX3g027297 | LOC_Os03g59580 | Os03g0810300 | - | Detail |
| C1H3g11302 | 3:31,636,858-31,642,955 | - | C2H3g12399 | CX3g028362 | LOC_Os03g59590 | Os03g0810600 | - | Detail |
| C1H3g11617 | 3:31,650,667-31,652,531 | - | C2H3g16986 | CX3g030481 | LOC_Os03g59600 | Os03g0810700 | - | Detail |
| C1H3g30674 | 3:31,653,404-31,655,322 | + | C2H3g19706 | CX3g028870 | LOC_Os03g59610 | Os03g0810800 | OsABA2 | Detail |
| C1H3g01412 | 3:31,655,676-31,660,165 | - | C2H3g30149 | CX3g027301 | LOC_Os03g59620 | Os03g0810900 | - | Detail |
| C1H3g18901 | 3:31,662,066-31,668,698 | + | C2H3g14154 | CX3g030819 | LOC_Os03g59640 | Os03g0811100 | - | Detail |
| C1H3g26787 | 3:31,669,197-31,674,200 | + | C2H3g24154 | CX3g031200 | LOC_Os03g59650 | Os03g0811200 | - | Detail |
| C1H3g09735 | 3:31,677,228-31,679,230 | + | C2H3g07522 | CX3g028699 | LOC_Os03g59660 | Os03g0811300 | - | Detail |
| C1H3g09793 | 3:31,681,847-31,683,197 | + | C2H3g08986 | CX3g027906 | LOC_Os03g59670 | Os03g0811400 | - | Detail |
| C1H3g28609 | 3:31,694,355-31,698,287 | - | C2H3g03566 | CX3g026137 | LOC_Os03g59680 | Os03g0811500 | - | Detail |
| C1H3g20712 | 3:31,702,998-31,703,927 | - | C2H3g09547 | CX3g028706 | LOC_Os03g59690 | Os03g0811550 | - | Detail |
| C1H3g19969 | 3:31,704,308-31,707,244 | - | C2H3g28941 | CX3g027737 | LOC_Os03g59700 | Os03g0811600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g050099 | 7:10,929,976-10,930,527 | + | C1H7g10880 | C2H7g29173 | LOC_Os07g22680 | Os07g0409500 | - | Detail |
| CX7g047683 | 7:10,939,200-10,944,305 | - | C1H7g15573 | C2H7g02442 | LOC_Os07g22700 | Os07g0409700 | - | Detail |
| CX7g047643 | 7:10,963,117-10,971,305 | - | C1H7g14776 | C2H7g05460 | LOC_Os07g22710 | Os07g0409900 | - | Detail |
| CX7g047493 | 7:10,982,404-10,989,293 | - | C1H7g10366 | C2H7g06667 | LOC_Os07g22720 | Os07g0410100 | - | Detail |
| CX7g047762 | 7:10,991,433-10,991,615 | + | - | - | - | Os07g0616100 | - | Detail |
| CX7g048430 | 7:10,997,534-10,998,205 | - | C1H7g02269 | C2H7g30040 | LOC_Os07g22730 | Os07g0410700 | - | Detail |
| CX7g049827 | 7:11,015,896-11,016,615 | - | C1H7g02269 | C2H7g26113 | LOC_Os07g22770 | Os07g0410700 | - | Detail |
| CX7g049268 | 7:11,020,773-11,020,949 | + | - | - | - | - | - | Detail |
| CX7g048167 | 7:11,022,284-11,022,545 | - | - | - | - | Os07g0467800 | - | Detail |
| CX7g047411 | 7:11,026,332-11,026,523 | - | - | - | - | - | - | Detail |
| CX7g049102 | 7:11,040,801-11,041,064 | - | C1H7g17880 | C2H7g20330 | - | Os07g0411250 | - | Detail |
| CX7g047430 | 7:11,041,860-11,042,114 | + | - | C2H7g19172 | LOC_Os07g22840 | Os07g0411200 | - | Detail |
| CX7g049471 | 7:11,043,607-11,044,982 | - | C1H7g25392 | C2H7g21786 | LOC_Os07g22850 | Os07g0411300 | OsPKS2 | Detail |
| CX7g050392 | 7:11,066,008-11,069,958 | - | C1H7g02385 | C2H7g00323 | LOC_Os07g22930 | Os07g0412100 | GBSSII | Detail |
| CX7g049378 | 7:11,089,267-11,093,365 | + | C1H7g16098 | C2H7g00343 | LOC_Os07g22950 | Os07g0412400 | - | Detail |
| CX7g046574 | 7:11,103,923-11,114,285 | + | C1H7g14122 | C2H7g23690 | LOC_Os07g23110 | Os07g0413700 | OsPARP1.2 | Detail |
| CX7g046554 | 7:11,125,317-11,126,162 | - | - | C2H7g01947 | LOC_Os07g23120 | Os07g0413800 | - | Detail |
| CX7g049143 | 7:11,136,953-11,138,359 | + | C1H7g16311 | C2H7g16215 | LOC_Os07g23150 | Os07g0414000 | - | Detail |
| CX7g048934 | 7:11,156,447-11,157,616 | + | C1H7g14667 | C2H7g08050 | LOC_Os07g23190 | Os07g0414700 | - | Detail |
| CX7g046357 | 7:11,160,237-11,163,856 | - | C1H7g21170 | C2H7g03535 | LOC_Os07g23200 | Os07g0414800 | - | Detail |