| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g21290 | 3:27,144,259-27,147,001 | + | C1H3g02226 | CX3g025544 | LOC_Os03g51640 | Os03g0726400 | - | Detail |
| C2H3g14903 | 3:27,147,603-27,153,167 | - | C1H3g17376 | CX3g026178 | LOC_Os03g51650 | Os03g0726500 | - | Detail |
| C2H3g08813 | 3:27,169,931-27,170,535 | - | C1H3g20845 | CX3g028096 | LOC_Os03g51660 | Os03g0726700 | TAC3 | Detail |
| C2H3g26898 | 3:27,172,020-27,176,770 | - | C1H3g06495 | CX3g027385 | LOC_Os03g51670 | Os03g0726800 | - | Detail |
| C2H3g29132 | 3:27,179,651-27,182,095 | - | C1H3g20532 | - | LOC_Os03g51680 | Os03g0726900 | - | Detail |
| C2H3g04769 | 3:27,183,568-27,192,996 | - | C1H3g31203 | CX3g029433 | LOC_Os03g51690 | Os03g0673000 | - | Detail |
| C2H3g17627 | 3:27,208,745-27,210,481 | + | C1H3g28999 | CX3g029277 | LOC_Os03g51700 | Os03g0727100 | - | Detail |
| C2H3g26829 | 3:27,211,090-27,213,589 | - | C1H3g18589 | CX3g027566 | LOC_Os03g51710 | Os03g0673000 | - | Detail |
| C2H3g16078 | 3:27,216,284-27,217,020 | - | C1H3g28804 | CX3g027566 | LOC_Os03g51710 | Os03g0727200 | OSH3 | Detail |
| C2H3g10133 | 3:27,217,234-27,217,521 | - | C1H3g29743 | CX3g029433 | LOC_Os03g51710 | Os03g0727200 | OSH3 | Detail |
| C2H3g07488 | 3:27,240,550-27,242,793 | - | C1H3g10075 | CX3g027050 | LOC_Os03g51740 | Os03g0727600 | ACS1, ACC1*, OsACS1, Os-ACS1, ACC1 | Detail |
| C2H3g29705 | 3:27,270,239-27,277,690 | - | C1H3g08935 | CX3g031106 | LOC_Os03g51790 | Os03g0727900 | - | Detail |
| C2H3g15707 | 3:27,282,280-27,284,906 | + | C1H3g03486 | CX3g025416 | LOC_Os03g51830 | Os03g0728100 | - | Detail |
| C2H3g03478 | 3:27,295,426-27,297,246 | - | C1H3g05198 | CX3g027150 | LOC_Os03g51880 | Os03g0728600 | - | Detail |
| C2H3g14472 | 3:27,300,463-27,301,294 | - | C1H3g06505 | - | LOC_Os03g51890 | - | - | Detail |
| C2H3g03813 | 3:27,303,954-27,309,655 | - | C1H3g18395 | CX3g026995 | LOC_Os03g51890 | - | - | Detail |
| C2H3g12518 | 3:27,313,031-27,321,193 | + | C1H3g00993 | CX3g028728 | LOC_Os03g51900 | Os03g0728800 | - | Detail |
| C2H3g09824 | 3:27,322,187-27,326,035 | - | C1H3g31891 | CX3g029342 | LOC_Os03g51910 | Os03g0728900 | - | Detail |
| C2H3g06497 | 3:27,331,385-27,333,432 | - | C1H3g25139 | CX3g026713 | LOC_Os03g51920 | Os03g0729000 | - | Detail |
| C2H3g02798 | 3:27,336,292-27,337,983 | - | C1H3g11342 | CX3g029290 | LOC_Os03g51930 | Os03g0729100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002666 | 1:26,691,886-26,693,334 | + | C1H1g26429 | C2H1g06050 | LOC_Os01g51980 | Os01g0717400 | - | Detail |
| CX1g004013 | 1:26,705,649-26,709,954 | + | C1H1g16623 | C2H1g03035 | LOC_Os01g52010 | Os01g0717700 | - | Detail |
| CX1g006728 | 1:26,724,072-26,724,830 | - | - | - | LOC_Os01g51990 | Os01g0717601 | - | Detail |
| CX1g002595 | 1:26,745,951-26,749,316 | - | C1H1g02696 | C2H1g25952 | LOC_Os01g52050 | Os01g0718300 | - | Detail |
| CX1g003113 | 1:26,755,918-26,756,246 | + | C1H1g14248 | C2H1g19010 | LOC_Os01g52060 | Os01g0718500 | - | Detail |
| CX1g004561 | 1:26,761,932-26,766,399 | + | C1H1g23869 | C2H1g25740 | LOC_Os01g52070 | Os01g0718700 | - | Detail |
| CX1g000362 | 1:26,769,378-26,770,412 | - | - | - | LOC_Os01g52090 | Os01g0718900 | - | Detail |
| CX1g002233 | 1:26,780,891-26,781,792 | + | C1H1g28082 | C2H1g24505 | LOC_Os01g52100 | Os01g0719000 | - | Detail |
| CX1g006737 | 1:26,788,629-26,788,859 | - | - | - | - | - | - | Detail |
| CX1g004024 | 1:26,806,170-26,810,883 | + | C1H1g27416 | C2H1g16157 | LOC_Os01g52130 | Os01g0719300 | OsSULTR3;6 | Detail |
| CX1g005204 | 1:26,814,605-26,820,052 | + | C1H1g30372 | C2H1g04500 | LOC_Os01g52140 | Os01g0719400 | - | Detail |
| CX1g003039 | 1:26,825,153-26,827,179 | + | C1H1g18944 | C2H1g02109 | LOC_Os01g52160 | Os01g0719600 | - | Detail |
| CX1g005692 | 1:26,829,768-26,833,364 | + | C1H1g29948 | C2H1g21306 | LOC_Os01g52170 | Os01g0719700 | - | Detail |
| CX1g006540 | 1:26,835,732-26,836,694 | + | C1H1g29733 | C2H1g12535 | LOC_Os01g52180 | Os01g0719900 | - | Detail |
| CX1g004595 | 1:26,837,454-26,838,794 | - | C1H1g20732 | C2H1g22549 | LOC_Os01g52190 | Os01g0720000 | - | Detail |
| CX1g000903 | 1:26,839,364-26,841,224 | - | C1H1g20732 | C2H1g00582 | LOC_Os01g52200 | Os01g0600000 | - | Detail |
| CX1g005572 | 1:26,842,382-26,844,919 | - | C1H1g14278 | C2H1g08396 | LOC_Os01g52214 | Os01g0720300 | - | Detail |
| CX1g005856 | 1:26,846,725-26,847,602 | - | C1H1g07112 | C2H1g02571 | LOC_Os01g52230 | Os01g0720400 | OsACP1 | Detail |
| CX1g006085 | 1:26,853,840-26,863,054 | - | C1H1g31092 | C2H1g27768 | LOC_Os01g52250 | Os01g0720600 | SSIVA, OsSSIVa, SSIV-1 | Detail |
| CX1g001499 | 1:26,864,041-26,864,952 | + | C1H5g17231 | C2H5g28299 | LOC_Os01g52260 | Os01g0720700 | OsSAT1;1 | Detail |