| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g05410 | 3:2,813,014-2,821,309 | + | C1H3g11682 | CX3g027922 | LOC_Os03g06510 | Os03g0161100 | - | Detail |
| C2H3g11481 | 3:2,821,809-2,827,231 | - | C1H3g12948 | CX3g029615 | LOC_Os03g06520 | Os03g0161200 | - | Detail |
| C2H3g04338 | 3:2,839,593-2,841,892 | + | C1H3g19950 | CX3g031150 | LOC_Os03g06570 | Os03g0161400 | - | Detail |
| C2H3g04897 | 3:2,849,650-2,852,046 | + | C1H3g16884 | CX3g029485 | LOC_Os03g06580 | Os03g0161500 | - | Detail |
| C2H3g20671 | 3:2,857,405-2,857,866 | - | C1H3g31680 | CX3g029738 | LOC_Os03g06610 | Os03g0161600 | OsEPFL6 | Detail |
| C2H3g16543 | 3:2,873,484-2,875,711 | + | C1H3g19723 | CX3g029835 | LOC_Os03g06620 | Os03g0161800 | - | Detail |
| C2H3g18983 | 3:2,877,424-2,879,447 | + | C1H3g17239 | CX3g029527 | LOC_Os03g06630 | Os03g0795900 | HSFA2E, HSfA2e, OsHsfA2e, OsHsf-12, HSF12 | Detail |
| C2H3g18594 | 3:2,887,211-2,888,499 | + | - | - | - | - | - | Detail |
| C2H3g18217 | 3:2,889,436-2,891,957 | + | C1H3g19807 | CX3g030288 | LOC_Os03g06654 | Os03g0162000 | COW1, OsCOW1, oscow1, OsYUC8, NAL7, OsYUCCA8, FMO, OsFMO(t) | Detail |
| C2H3g01853 | 3:2,903,303-2,903,873 | + | C1H3g07386 | CX3g030521 | LOC_Os03g06670 | Os03g0162200 | - | Detail |
| C2H3g21314 | 3:2,911,394-2,912,892 | + | C1H3g24759 | CX3g025819 | LOC_Os03g06680 | Os03g0162500 | OsDUF50604 | Detail |
| C2H3g14410 | 3:2,930,448-2,934,898 | + | C1H3g16348 | CX3g029826 | LOC_Os03g06705 | Os03g0162800 | - | Detail |
| C2H3g28634 | 3:2,935,603-2,936,034 | + | C1H3g31273 | - | - | - | - | Detail |
| C2H3g14053 | 3:2,936,052-2,938,523 | + | C1H3g16422 | CX3g027686 | LOC_Os03g06710 | Os03g0162900 | - | Detail |
| C2H3g03063 | 3:2,941,941-2,943,677 | + | C1H3g04672 | - | - | Os03g0163000 | - | Detail |
| C2H3g15393 | 3:2,944,725-2,952,303 | + | C1H3g10390 | CX3g025042 | LOC_Os03g06720 | Os03g0163100 | - | Detail |
| C2H3g06714 | 3:2,952,491-2,953,976 | + | C1H3g23541 | CX3g025042 | LOC_Os03g06730 | Os03g0163200 | - | Detail |
| C2H3g22693 | 3:2,954,872-2,959,579 | + | C1H3g17347 | CX3g026090 | LOC_Os03g06740 | Os03g0163300 | - | Detail |
| C2H3g01887 | 3:2,960,166-2,961,935 | - | C1H3g06657 | CX3g029299 | LOC_Os03g06750 | Os03g0163400 | - | Detail |
| C2H3g29355 | 3:2,964,329-2,966,695 | + | C1H3g03297 | CX3g026455 | LOC_Os03g06760 | Os03g0163500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002666 | 1:26,691,886-26,693,334 | + | C1H1g26429 | C2H1g06050 | LOC_Os01g51980 | Os01g0717400 | - | Detail |
| CX1g004013 | 1:26,705,649-26,709,954 | + | C1H1g16623 | C2H1g03035 | LOC_Os01g52010 | Os01g0717700 | - | Detail |
| CX1g006728 | 1:26,724,072-26,724,830 | - | - | - | LOC_Os01g51990 | Os01g0717601 | - | Detail |
| CX1g002595 | 1:26,745,951-26,749,316 | - | C1H1g02696 | C2H1g25952 | LOC_Os01g52050 | Os01g0718300 | - | Detail |
| CX1g003113 | 1:26,755,918-26,756,246 | + | C1H1g14248 | C2H1g19010 | LOC_Os01g52060 | Os01g0718500 | - | Detail |
| CX1g004561 | 1:26,761,932-26,766,399 | + | C1H1g23869 | C2H1g25740 | LOC_Os01g52070 | Os01g0718700 | - | Detail |
| CX1g000362 | 1:26,769,378-26,770,412 | - | - | - | LOC_Os01g52090 | Os01g0718900 | - | Detail |
| CX1g002233 | 1:26,780,891-26,781,792 | + | C1H1g28082 | C2H1g24505 | LOC_Os01g52100 | Os01g0719000 | - | Detail |
| CX1g006737 | 1:26,788,629-26,788,859 | - | - | - | - | - | - | Detail |
| CX1g004024 | 1:26,806,170-26,810,883 | + | C1H1g27416 | C2H1g16157 | LOC_Os01g52130 | Os01g0719300 | OsSULTR3;6 | Detail |
| CX1g005204 | 1:26,814,605-26,820,052 | + | C1H1g30372 | C2H1g04500 | LOC_Os01g52140 | Os01g0719400 | - | Detail |
| CX1g003039 | 1:26,825,153-26,827,179 | + | C1H1g18944 | C2H1g02109 | LOC_Os01g52160 | Os01g0719600 | - | Detail |
| CX1g005692 | 1:26,829,768-26,833,364 | + | C1H1g29948 | C2H1g21306 | LOC_Os01g52170 | Os01g0719700 | - | Detail |
| CX1g006540 | 1:26,835,732-26,836,694 | + | C1H1g29733 | C2H1g12535 | LOC_Os01g52180 | Os01g0719900 | - | Detail |
| CX1g004595 | 1:26,837,454-26,838,794 | - | C1H1g20732 | C2H1g22549 | LOC_Os01g52190 | Os01g0720000 | - | Detail |
| CX1g000903 | 1:26,839,364-26,841,224 | - | C1H1g20732 | C2H1g00582 | LOC_Os01g52200 | Os01g0600000 | - | Detail |
| CX1g005572 | 1:26,842,382-26,844,919 | - | C1H1g14278 | C2H1g08396 | LOC_Os01g52214 | Os01g0720300 | - | Detail |
| CX1g005856 | 1:26,846,725-26,847,602 | - | C1H1g07112 | C2H1g02571 | LOC_Os01g52230 | Os01g0720400 | OsACP1 | Detail |
| CX1g006085 | 1:26,853,840-26,863,054 | - | C1H1g31092 | C2H1g27768 | LOC_Os01g52250 | Os01g0720600 | SSIVA, OsSSIVa, SSIV-1 | Detail |
| CX1g001499 | 1:26,864,041-26,864,952 | + | C1H5g17231 | C2H5g28299 | LOC_Os01g52260 | Os01g0720700 | OsSAT1;1 | Detail |