| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g11033 | 4:23,665,088-23,667,430 | - | C1H4g12131 | CX4g032840 | LOC_Os04g46320 | Os04g0548400 | - | Detail |
| C2H4g30491 | 4:23,670,654-23,671,898 | - | C1H2g19219 | CX4g032635 | LOC_Os04g46330 | Os04g0548500 | - | Detail |
| C2H4g19703 | 4:23,678,990-23,680,201 | - | C1H4g26382 | CX4g034670 | LOC_Os04g46350 | Os04g0548700 | - | Detail |
| C2H4g12477 | 4:23,690,645-23,694,074 | - | C1H4g18543 | CX4g032819 | LOC_Os04g46370 | Os04g0549300 | - | Detail |
| C2H4g23802 | 4:23,694,280-23,694,680 | + | C1H4g06939 | CX4g034583 | LOC_Os04g46380 | Os04g0549400 | - | Detail |
| C2H4g16012 | 4:23,698,059-23,699,921 | + | C1H4g13580 | CX4g033131 | LOC_Os04g46384 | Os04g0549500 | Os2R_MYB49 | Detail |
| C2H4g10744 | 4:23,700,634-23,705,138 | + | C1H4g09321 | CX4g031909 | LOC_Os04g46390 | Os04g0549600 | - | Detail |
| C2H4g11718 | 4:23,711,947-23,712,801 | + | C1H4g06177 | CX4g032343 | LOC_Os04g46400 | Os04g0549700 | OsAP2/ERF-40, OsTOC168 | Detail |
| C2H4g26941 | 4:23,717,907-23,718,638 | + | C1H4g06177 | CX4g034152 | LOC_Os04g46410 | Os04g0549800 | - | Detail |
| C2H4g00089 | 4:23,737,285-23,737,938 | + | C1H4g06177 | CX4g032904 | LOC_Os04g46440 | Os04g0550200 | OsERF34 | Detail |
| C2H4g18020 | 4:23,737,952-23,738,382 | - | C1H4g25073 | - | - | - | - | Detail |
| C2H4g27792 | 4:23,748,870-23,757,468 | - | C1H4g24190 | CX4g034813 | LOC_Os04g46450 | Os04g0550400 | OsHUB1, HUB1 | Detail |
| C2H4g02409 | 4:23,760,525-23,761,556 | + | - | CX4g032195 | LOC_Os04g46460 | Os04g0550500 | - | Detail |
| C2H4g04395 | 4:23,765,337-23,767,978 | + | C1H4g17634 | CX4g034240 | LOC_Os04g46470 | Os04g0550600 | HTD1, OsCCD7, D17 | Detail |
| C2H4g05787 | 4:23,768,309-23,770,201 | - | C1H4g11880 | CX4g034920 | LOC_Os04g46480 | Os04g0550700 | - | Detail |
| C2H4g01885 | 4:23,773,303-23,774,294 | - | C1H4g31862 | CX4g034128 | LOC_Os04g46490 | Os04g0550800 | - | Detail |
| C2H4g17694 | 4:23,774,764-23,775,695 | - | C1H4g15457 | CX4g034482 | LOC_Os04g46530 | Os04g0550900 | - | Detail |
| C2H4g01769 | 4:23,780,337-23,783,129 | + | C1H4g10662 | CX4g034419 | LOC_Os04g46560 | Os04g0551200 | OsMDH4.1 | Detail |
| C2H4g03635 | 4:23,784,093-23,787,452 | - | C1H4g21894 | CX4g035452 | LOC_Os04g46570 | Os04g0551300 | - | Detail |
| C2H4g26920 | 4:23,790,158-23,793,292 | + | C1H4g10694 | CX4g033814 | LOC_Os04g46580 | Os04g0551500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g048233 | 7:7,588,357-7,588,554 | - | - | - | - | - | - | Detail |
| CX7g047387 | 7:7,626,744-7,629,676 | - | C1H7g30006 | C2H7g28482 | LOC_Os07g15770 | Os07g0261200 | GHD7, Ghd2, Ghd7, OsCCT26, OsCMF8, OsI | Detail |
| CX7g048982 | 7:7,634,601-7,634,876 | + | C1H7g08155 | - | LOC_Os12g18620 | Os03g0388300 | - | Detail |
| CX7g049319 | 7:7,688,398-7,693,747 | - | C1H7g31512 | C2H7g01122 | LOC_Os07g15880 | Os07g0262200 | NAL8 | Detail |
| CX7g047135 | 7:7,695,028-7,700,248 | + | - | - | - | Os12g0261250 | - | Detail |
| CX7g046436 | 7:7,704,106-7,707,181 | - | - | C2H7g21162 | - | Os07g0262300 | - | Detail |
| CX7g048568 | 7:7,721,544-7,723,562 | + | C1H7g09928 | C2H7g21491 | LOC_Os07g15930 | Os07g0262600 | - | Detail |
| CX7g047260 | 7:7,727,166-7,729,196 | - | C1H7g09928 | C2H7g17715 | LOC_Os07g15940 | Os07g0262800 | - | Detail |
| CX7g047599 | 7:7,742,305-7,742,601 | + | - | C2H9g04011 | - | - | - | Detail |
| CX7g046305 | 7:7,766,430-7,769,711 | + | C1H7g22408 | C2H7g01386 | LOC_Os07g15970 | Os07g0263400 | - | Detail |
| CX7g047548 | 7:7,775,355-7,775,621 | + | - | - | - | - | - | Detail |
| CX7g049322 | 7:7,784,083-7,784,328 | - | - | - | - | - | - | Detail |
| CX7g047611 | 7:7,808,252-7,813,008 | + | C1H7g09816 | C2H7g01386 | LOC_Os07g16040 | Os07g0264100 | - | Detail |
| CX7g048213 | 7:7,826,693-7,829,049 | + | C1H7g20158 | C2H7g12752 | - | - | - | Detail |
| CX7g047404 | 7:7,831,184-7,834,104 | + | C1H7g15316 | C2H7g13124 | LOC_Os09g25510 | Os07g0627100 | - | Detail |
| CX7g046311 | 7:7,846,112-7,851,489 | + | C1H7g08514 | C2H7g28144 | LOC_Os07g16130 | Os07g0264800 | - | Detail |
| CX7g046541 | 7:7,854,380-7,857,778 | + | C1H7g26865 | C2H7g06930 | LOC_Os07g16140 | Os07g0264900 | - | Detail |
| CX7g049317 | 7:7,874,904-7,875,290 | - | - | - | - | Os07g0618266 | - | Detail |
| CX7g046314 | 7:7,905,888-7,916,721 | - | C1H7g24956 | C2H7g16781 | LOC_Os07g16224 | Os07g0265600 | - | Detail |
| CX7g046112 | 7:7,944,884-7,945,069 | - | - | - | - | - | - | Detail |