| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g17856 | 3:20,132,993-20,140,955 | + | C2H3g26439 | CX3g028199 | LOC_Os03g38250 | Os03g0579200 | - | Detail |
| C1H3g30161 | 3:20,142,093-20,143,998 | - | C2H3g04801 | CX3g031152 | LOC_Os03g38260 | Os03g0579300 | - | Detail |
| C1H3g19661 | 3:20,170,033-20,173,899 | + | C2H3g22136 | CX3g030876 | LOC_Os03g38330 | Os03g0579900 | - | Detail |
| C1H3g05907 | 3:20,175,562-20,177,623 | - | C2H3g16131 | CX3g028906 | LOC_Os03g38470 | Os03g0580200 | - | Detail |
| C1H3g30114 | 3:20,180,025-20,180,303 | - | C2H3g16946 | CX3g028906 | LOC_Os03g38390 | Os03g0580800 | - | Detail |
| C1H3g01162 | 3:20,211,512-20,213,946 | - | C2H3g29291 | CX3g028223 | LOC_Os03g38390 | Os03g0580800 | - | Detail |
| C1H3g15849 | 3:20,216,962-20,217,562 | - | C2H3g06939 | CX3g028223 | LOC_Os03g38390 | Os03g0580800 | - | Detail |
| C1H3g29283 | 3:20,260,014-20,263,298 | - | C2H3g29291 | CX3g029909 | LOC_Os03g38470 | Os03g0581400 | - | Detail |
| C1H3g23142 | 3:20,300,902-20,302,102 | + | C2H3g11586 | CX3g030172 | LOC_Os03g38480 | - | - | Detail |
| C1H3g27579 | 3:20,305,139-20,305,562 | + | - | - | - | - | - | Detail |
| C1H3g02084 | 3:20,307,514-20,308,023 | + | - | - | - | - | - | Detail |
| C1H3g26388 | 3:20,308,114-20,308,500 | + | C2H3g06589 | CX3g027290 | LOC_Os03g38490 | Os03g0581600 | - | Detail |
| C1H3g20622 | 3:20,311,194-20,313,195 | + | - | - | LOC_Os03g38490 | Os03g0581600 | - | Detail |
| C1H3g13237 | 3:20,321,783-20,325,857 | + | C2H3g11410 | CX3g026435 | LOC_Os03g38500 | Os03g0581650 | - | Detail |
| C1H3g07355 | 3:20,327,849-20,328,280 | + | - | - | - | - | - | Detail |
| C1H3g17977 | 3:20,328,786-20,332,482 | + | C2H3g06922 | CX3g028447 | LOC_Os03g38520 | Os03g0581800 | - | Detail |
| C1H3g14219 | 3:20,337,590-20,339,525 | + | C2H3g10966 | CX3g027412 | LOC_Os03g38540 | Os03g0582000 | - | Detail |
| C1H3g04338 | 3:20,340,591-20,342,543 | - | C2H3g04652 | CX3g028106 | LOC_Os03g38580 | Os03g0582100 | - | Detail |
| C1H3g18500 | 3:20,345,589-20,349,136 | - | C2H3g02001 | CX3g025759 | LOC_Os03g38590 | Os03g0582200 | - | Detail |
| C1H3g03271 | 3:20,350,004-20,354,665 | - | C2H3g21731 | CX3g025759 | LOC_Os03g38600 | Os03g0582300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g046339 | 7:6,914,852-6,916,304 | - | C1H7g12267 | C2H7g16580 | LOC_Os07g14080 | Os07g0244200 | - | Detail |
| CX7g047412 | 7:6,916,990-6,917,595 | + | - | - | - | - | - | Detail |
| CX7g047009 | 7:6,925,123-6,929,955 | + | C1H7g07718 | C2H7g19628 | LOC_Os07g14090 | Os07g0244300 | - | Detail |
| CX7g048723 | 7:6,931,463-6,932,776 | - | C1H7g01063 | C2H7g09874 | LOC_Os07g14100 | Os07g0244400 | - | Detail |
| CX7g046939 | 7:6,939,995-6,941,914 | + | C1H7g06408 | C2H7g05609 | LOC_Os07g14110 | Os07g0244500 | Os2R_MYB68 | Detail |
| CX7g049430 | 7:6,949,024-6,950,231 | + | C1H7g06408 | C2H7g05609 | LOC_Os07g14110 | Os07g0244500 | Os2R_MYB68 | Detail |
| CX7g046731 | 7:6,959,445-6,960,342 | - | C1H7g08427 | C2H7g11103 | LOC_Os07g14140 | Os07g0244900 | - | Detail |
| CX7g047696 | 7:6,970,836-6,971,944 | + | C1H7g26252 | C2H7g20642 | LOC_Os07g14150 | Os07g0245100 | - | Detail |
| CX7g049693 | 7:6,973,641-6,975,973 | - | C1H7g05176 | C2H7g13018 | LOC_Os07g14160 | Os07g0245200 | - | Detail |
| CX7g047858 | 7:6,982,471-6,982,794 | - | - | - | - | - | - | Detail |
| CX7g047986 | 7:6,986,517-6,990,379 | + | C1H7g23841 | C2H7g16503 | LOC_Os07g14270 | Os07g0246200 | - | Detail |
| CX7g049084 | 7:6,992,768-6,993,664 | - | - | - | - | - | - | Detail |
| CX7g049171 | 7:6,994,687-6,995,634 | - | C1H7g10746 | C2H7g25467 | LOC_Os07g14280 | Os07g0252000 | - | Detail |
| CX7g050066 | 7:7,010,569-7,014,690 | - | C1H7g27924 | C2H7g02813 | LOC_Os07g14310 | Os07g0246600 | - | Detail |
| CX7g050161 | 7:7,033,100-7,034,203 | + | C1H7g16626 | C2H7g30637 | LOC_Os07g14340 | Os07g0247000 | OsPMEI27 | Detail |
| CX7g048572 | 7:7,042,505-7,048,040 | + | C1H7g21205 | C2H7g19240 | LOC_Os07g14350 | Os07g0247100 | LLB, OsLLB, LCMT, OsMTS1, pls3 | Detail |
| CX7g047855 | 7:7,053,643-7,057,607 | - | C1H7g01924 | C2H7g02800 | LOC_Os07g14530 | Os07g0249100 | - | Detail |
| CX7g046577 | 7:7,060,521-7,063,646 | + | C1H7g11925 | C2H7g03420 | LOC_Os07g14540 | Os07g0249200 | - | Detail |
| CX7g049881 | 7:7,074,667-7,074,819 | + | - | - | - | Os02g0188201 | - | Detail |
| CX7g046878 | 7:7,076,643-7,081,254 | + | C1H7g20861 | C2H7g26292 | LOC_Os07g14580 | Os07g0249600 | - | Detail |