| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g04057 | 4:21,743,110-21,744,310 | - | C2H4g25390 | CX4g031891 | LOC_Os04g42134 | Os04g0499200 | - | Detail |
| C1H4g00134 | 4:21,745,544-21,751,632 | - | C2H4g20172 | CX4g035111 | LOC_Os04g42140 | Os04g0499300 | RYMV1 | Detail |
| C1H4g24364 | 4:21,776,225-21,777,834 | + | C2H4g02845 | CX4g035561 | LOC_Os04g42160 | - | - | Detail |
| C1H4g04561 | 4:21,781,312-21,782,073 | - | C2H4g09516 | CX4g035616 | LOC_Os04g42200 | Os04g0500200 | - | Detail |
| C1H4g07100 | 4:21,782,950-21,783,623 | + | C2H4g21155 | CX4g034798 | LOC_Os04g42210 | Os04g0500300 | - | Detail |
| C1H4g19980 | 4:21,785,750-21,786,476 | + | C2H4g14569 | CX4g032419 | LOC_Os04g42220 | Os04g0500400 | - | Detail |
| C1H4g27904 | 4:21,798,165-21,803,858 | + | C2H4g14624 | CX4g033698 | LOC_Os04g42250 | Os04g0500700 | - | Detail |
| C1H4g03919 | 4:21,807,927-21,810,997 | + | C2H4g24343 | CX4g034952 | LOC_Os04g42260 | Os04g0500900 | - | Detail |
| C1H4g10006 | 4:21,812,568-21,814,450 | - | C2H4g19796 | CX4g034970 | LOC_Os04g42270 | Os04g0501000 | - | Detail |
| C1H4g23951 | 4:21,815,145-21,818,488 | + | C2H4g05530 | CX4g033035 | LOC_Os04g42280 | Os04g0501100 | - | Detail |
| C1H4g25280 | 4:21,820,409-21,823,671 | + | C2H4g16771 | CX4g036023 | LOC_Os04g42290 | Os04g0501200 | - | Detail |
| C1H4g15554 | 4:21,847,646-21,854,602 | - | C2H4g27535 | CX4g035234 | LOC_Os04g42320 | Os04g0501600 | - | Detail |
| C1H4g01323 | 4:21,859,782-21,865,956 | + | C2H4g15764 | CX4g034189 | LOC_Os04g42330 | Os04g0501700 | - | Detail |
| C1H4g00716 | 4:21,869,085-21,871,132 | + | C2H4g27962 | CX4g032700 | LOC_Os04g42340 | Os04g0501800 | - | Detail |
| C1H4g29745 | 4:21,876,784-21,879,214 | + | C2H4g27570 | CX4g034230 | LOC_Os04g42360 | Os04g0502100 | - | Detail |
| C1H4g31377 | 4:21,879,842-21,887,578 | + | C2H4g20801 | CX4g031888 | LOC_Os04g42370 | Os04g0502200 | - | Detail |
| C1H4g24462 | 4:21,890,487-21,892,370 | - | C2H4g21349 | CX4g036274 | LOC_Os04g42380 | Os04g0502300 | - | Detail |
| C1H4g11983 | 4:21,902,584-21,907,590 | + | C2H4g30598 | CX4g032715 | LOC_Os04g42420 | Os04g0502800 | - | Detail |
| C1H4g13189 | 4:21,911,459-21,911,986 | - | C2H7g12095 | CX7g046424 | LOC_Os04g25280 | - | - | Detail |
| C1H4g16599 | 4:21,915,279-21,919,332 | + | C2H4g04819 | CX4g031486 | LOC_Os04g42430 | Os04g0502900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g050221 | 7:6,730,213-6,730,377 | - | C1H2g29701 | C2H2g02230 | LOC_Os07g13534 | Os07g0239500 | - | Detail |
| CX7g049811 | 7:6,735,810-6,738,479 | - | C1H7g01063 | C2H7g27410 | LOC_Os07g13540 | Os07g0239600 | - | Detail |
| CX7g046199 | 7:6,743,508-6,743,660 | + | C1H10g04132 | C2H7g04797 | - | Os04g0286400 | - | Detail |
| CX7g046948 | 7:6,769,984-6,771,900 | + | C1H7g26601 | C2H7g17006 | LOC_Os07g13580 | Os07g0240200 | - | Detail |
| CX7g048033 | 7:6,774,011-6,777,993 | + | C1H7g19651 | C2H7g02171 | LOC_Os07g13590 | Os07g0240300 | - | Detail |
| CX7g049281 | 7:6,779,813-6,780,406 | - | - | C2H7g15964 | LOC_Os07g13600 | Os07g0240400 | - | Detail |
| CX7g048187 | 7:6,814,681-6,820,442 | + | C1H7g07296 | C2H7g01280 | LOC_Os07g13780 | Os07g0241600 | - | Detail |
| CX7g046235 | 7:6,834,917-6,836,380 | + | - | C2H7g04169 | LOC_Os07g13830 | Os07g0242000 | - | Detail |
| CX7g048753 | 7:6,838,560-6,838,853 | + | - | - | - | - | - | Detail |
| CX7g049832 | 7:6,846,809-6,848,722 | - | C1H7g12672 | C2H7g08576 | LOC_Os07g13870 | Os07g0242400 | - | Detail |
| CX7g046059 | 7:6,850,960-6,851,877 | + | C1H7g13698 | C2H7g28754 | LOC_Os07g13890 | Os07g0242600 | - | Detail |
| CX7g046473 | 7:6,858,109-6,862,357 | + | C1H7g12352 | C2H7g29530 | LOC_Os07g13900 | Os07g0242700 | - | Detail |
| CX7g047254 | 7:6,863,451-6,864,908 | - | C1H7g27558 | C2H7g04445 | LOC_Os07g13920 | Os07g0272700 | - | Detail |
| CX7g047630 | 7:6,867,589-6,869,000 | + | C1H7g15934 | C2H7g12788 | LOC_Os07g13930 | Os07g0242900 | - | Detail |
| CX7g047323 | 7:6,873,196-6,874,630 | - | C1H7g14303 | C2H7g17046 | LOC_Os07g13940 | Os07g0241800 | - | Detail |
| CX7g046743 | 7:6,877,638-6,877,901 | - | - | - | - | - | - | Detail |
| CX7g049162 | 7:6,885,955-6,886,323 | + | - | C2H7g10734 | LOC_Os07g13969 | Os07g0243150 | - | Detail |
| CX7g048385 | 7:6,888,010-6,893,932 | - | C1H7g24938 | C2H7g11204 | LOC_Os07g13980 | Os07g0243200 | AGPL4, OsAGPL4, APL4, OsAPL4, OsSTA193 | Detail |
| CX7g049192 | 7:6,899,402-6,899,608 | + | - | - | - | - | - | Detail |
| CX7g049035 | 7:6,912,629-6,913,159 | + | - | C2H7g18177 | LOC_Os07g14030 | Os07g0243800 | - | Detail |