| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g21346 | 5:10,324,234-10,329,194 | - | C1H5g26586 | CX5g040894 | LOC_Os05g22260 | Os05g0289400 | - | Detail |
| C2H5g29326 | 5:10,330,331-10,330,809 | - | C1H5g29959 | CX5g040964 | LOC_Os05g22270 | - | - | Detail |
| C2H5g26149 | 5:10,338,492-10,341,510 | + | C1H5g10110 | CX5g037748 | LOC_Os09g19150 | Os05g0311600 | - | Detail |
| C2H5g03823 | 5:10,342,665-10,344,165 | + | C1H5g08048 | CX5g040911 | LOC_Os05g22300 | Os05g0289700 | - | Detail |
| C2H5g08400 | 5:10,428,659-10,432,688 | - | C1H5g06318 | - | LOC_Os05g22370 | Os05g0290300 | - | Detail |
| C2H5g10745 | 5:10,438,007-10,439,659 | - | C1H5g06318 | CX5g038011 | LOC_Os05g22370 | Os05g0290300 | - | Detail |
| C2H5g10916 | 5:10,439,320-10,440,623 | + | C1H5g18692 | - | - | Os05g0290400 | - | Detail |
| C2H5g04743 | 5:10,612,047-10,618,541 | - | C1H5g23196 | CX5g038307 | LOC_Os05g22614 | Os05g0291700 | - | Detail |
| C2H5g12203 | 5:10,639,127-10,645,568 | + | C1H5g20156 | CX5g040197 | LOC_Os05g22670 | Os05g0292200 | - | Detail |
| C2H5g15751 | 5:10,664,023-10,664,618 | + | C1H5g10205 | CX5g040839 | LOC_Os05g22730 | Os05g0292800 | OsOHP1 | Detail |
| C2H5g06041 | 5:10,678,585-10,687,148 | - | C1H12g26040 | - | - | Os10g0428200 | - | Detail |
| C2H5g02061 | 5:10,691,917-10,692,815 | - | - | CX5g038592 | - | - | - | Detail |
| C2H5g13624 | 5:10,724,486-10,729,652 | - | C1H5g15221 | CX5g036919 | LOC_Os05g22800 | Os05g0293500 | OsPLL5 | Detail |
| C2H5g22285 | 5:10,751,885-10,754,804 | - | C1H5g29337 | CX5g040512 | LOC_Os05g22870 | Os05g0294600 | - | Detail |
| C2H5g29555 | 5:10,782,809-10,783,164 | + | C1H5g20921 | CX5g040809 | LOC_Os05g33890 | Os05g0409400 | MAP65-5 | Detail |
| C2H5g17701 | 5:10,825,861-10,845,445 | + | C1H5g25906 | CX5g039739 | LOC_Os05g22920 | Os05g0295100 | - | Detail |
| C2H5g06215 | 5:10,896,429-10,899,560 | - | C1H5g28245 | CX5g039891 | LOC_Os05g22930 | Os05g0295200 | - | Detail |
| C2H5g06622 | 5:10,904,427-10,916,802 | - | C1H5g21771 | CX5g039924 | LOC_Os05g22940 | Os05g0295300 | OsACC1 | Detail |
| C2H5g27345 | 5:10,934,069-10,935,232 | - | - | CX5g036734 | - | Os05g0523100 | - | Detail |
| C2H5g19982 | 5:10,935,615-10,936,609 | - | C1H7g28852 | CX5g036734 | - | Os01g0266200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g049933 | 7:6,450,579-6,451,128 | - | C1H7g06867 | C2H7g30315 | LOC_Os07g12820 | Os07g0232100 | OsREM20 | Detail |
| CX7g050072 | 7:6,462,458-6,465,266 | + | C1H7g25642 | C2H7g05202 | LOC_Os07g12830 | Os07g0232200 | - | Detail |
| CX7g046231 | 7:6,476,128-6,476,322 | + | - | - | - | - | - | Detail |
| CX7g048221 | 7:6,477,728-6,481,441 | + | C1H7g05603 | C2H7g19630 | LOC_Os07g12850 | Os07g0534500 | OsRLCK233 | Detail |
| CX7g048493 | 7:6,482,594-6,482,752 | + | - | - | - | Os07g0616100 | - | Detail |
| CX7g046316 | 7:6,498,221-6,501,529 | + | C1H7g02868 | C2H7g17093 | LOC_Os07g12890 | Os07g0232800 | - | Detail |
| CX7g049689 | 7:6,502,267-6,502,581 | + | - | - | - | - | - | Detail |
| CX7g049525 | 7:6,503,436-6,503,768 | + | - | - | - | - | - | Detail |
| CX7g049630 | 7:6,505,380-6,508,920 | - | C1H7g20763 | C2H7g01423 | LOC_Os07g12900 | Os07g0232900 | HMA3, OsHMA3, OsHMA3a, OsHMA3n, osHMA3 | Detail |
| CX7g047155 | 7:6,512,142-6,512,918 | + | C1H7g22364 | C2H7g02241 | - | Os07g0233200 | - | Detail |
| CX7g047399 | 7:6,514,810-6,517,879 | - | C1H7g03828 | C2H7g17520 | LOC_Os07g12910 | Os07g0233300 | - | Detail |
| CX7g047888 | 7:6,549,622-6,553,366 | + | C1H7g19486 | C2H7g22291 | LOC_Os07g13170 | Os07g0235800 | SNB, AP2/EREBP73, OsSNB | Detail |
| CX7g049276 | 7:6,559,807-6,560,028 | + | - | - | - | Os07g0616100 | - | Detail |
| CX7g046765 | 7:6,602,229-6,603,215 | - | C1H7g24592 | C2H7g18355 | LOC_Os07g13260 | Os07g0236700 | - | Detail |
| CX7g046569 | 7:6,633,634-6,638,568 | + | C1H7g18736 | C2H7g02587 | LOC_Os07g13270 | Os07g0236800 | - | Detail |
| CX7g046591 | 7:6,651,559-6,651,798 | - | C1H7g20300 | C2H7g10881 | LOC_Os07g13310 | Os07g0237200 | - | Detail |
| CX7g046484 | 7:6,672,942-6,673,511 | - | C1H7g10498 | - | LOC_Os07g13370 | Os07g0237900 | - | Detail |
| CX7g046873 | 7:6,705,343-6,707,926 | - | C1H7g20832 | C2H7g11470 | LOC_Os07g13490 | Os07g0239000 | - | Detail |
| CX7g048182 | 7:6,718,479-6,721,682 | - | C1H7g27972 | C2H7g15112 | LOC_Os07g13520 | Os07g0239200 | - | Detail |
| CX7g050229 | 7:6,722,904-6,726,012 | - | C1H7g07495 | C2H7g23533 | LOC_Os07g13530 | Os07g0239400 | - | Detail |