| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g08519 | 2:29,141,433-29,143,056 | + | C1H2g00252 | CX2g020923 | LOC_Os02g51930 | Os02g0755900 | UGT3, OsUGT3 | Detail |
| C2H2g01748 | 2:29,147,906-29,148,339 | - | C1H2g13826 | - | LOC_Os02g51950 | Os02g0756100 | OsEPFL2 | Detail |
| C2H2g05080 | 2:29,152,297-29,153,223 | - | - | CX2g022296 | LOC_Os02g51970 | Os02g0756200 | - | Detail |
| C2H2g26812 | 2:29,156,931-29,157,872 | - | - | CX2g020271 | LOC_Os02g52000 | Os02g0756600 | - | Detail |
| C2H2g05361 | 2:29,162,413-29,163,399 | - | - | CX2g023021 | LOC_Os02g52010 | Os02g0756800 | - | Detail |
| C2H2g24893 | 2:29,167,598-29,168,533 | + | - | CX2g023021 | LOC_Os02g52040 | Os02g0757100 | - | Detail |
| C2H2g04860 | 2:29,170,382-29,170,867 | + | C1H2g18356 | CX2g023173 | LOC_Os02g52120 | - | - | Detail |
| C2H2g26225 | 2:29,181,681-29,184,421 | + | C1H2g11994 | CX2g020517 | LOC_Os02g52130 | Os02g0757700 | - | Detail |
| C2H2g01455 | 2:29,189,079-29,192,926 | - | C1H2g00307 | CX2g020566 | LOC_Os02g52140 | Os02g0757900 | - | Detail |
| C2H2g25477 | 2:29,193,325-29,194,091 | + | C1H2g27632 | CX2g023549 | LOC_Os02g52150 | Os02g0758000 | - | Detail |
| C2H2g06385 | 2:29,196,727-29,203,669 | + | C1H2g13642 | CX2g020363 | LOC_Os02g52160 | Os02g0758100 | - | Detail |
| C2H2g03849 | 2:29,205,721-29,206,956 | - | C1H11g05948 | - | - | - | - | Detail |
| C2H2g18730 | 2:29,206,981-29,207,538 | - | - | CX2g019906 | LOC_Os02g52170 | Os02g0758200 | - | Detail |
| C2H2g20568 | 2:29,214,455-29,215,381 | - | C1H2g09312 | CX2g018879 | LOC_Os02g52180 | Os02g0758800 | - | Detail |
| C2H2g15822 | 2:29,222,248-29,224,174 | - | C1H2g17070 | CX2g019685 | LOC_Os02g52190 | Os02g0759000 | OsbHLH048 | Detail |
| C2H2g05043 | 2:29,229,731-29,231,020 | + | C1H2g26668 | CX2g024667 | LOC_Os02g52210 | Os02g0759400 | OsATL38 | Detail |
| C2H2g17235 | 2:29,233,107-29,234,774 | + | C1H2g20944 | CX2g023989 | LOC_Os02g52220 | Os02g0759500 | - | Detail |
| C2H2g04549 | 2:29,242,219-29,245,361 | + | C1H2g18903 | CX2g021992 | LOC_Os02g52230 | Os02g0759700 | - | Detail |
| C2H2g21014 | 2:29,251,307-29,253,130 | - | - | CX2g023109 | LOC_Os02g52250 | Os02g0759800 | - | Detail |
| C2H2g22565 | 2:29,254,168-29,254,458 | - | - | - | - | Os02g0286500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g049933 | 7:6,450,579-6,451,128 | - | C1H7g06867 | C2H7g30315 | LOC_Os07g12820 | Os07g0232100 | OsREM20 | Detail |
| CX7g050072 | 7:6,462,458-6,465,266 | + | C1H7g25642 | C2H7g05202 | LOC_Os07g12830 | Os07g0232200 | - | Detail |
| CX7g046231 | 7:6,476,128-6,476,322 | + | - | - | - | - | - | Detail |
| CX7g048221 | 7:6,477,728-6,481,441 | + | C1H7g05603 | C2H7g19630 | LOC_Os07g12850 | Os07g0534500 | OsRLCK233 | Detail |
| CX7g048493 | 7:6,482,594-6,482,752 | + | - | - | - | Os07g0616100 | - | Detail |
| CX7g046316 | 7:6,498,221-6,501,529 | + | C1H7g02868 | C2H7g17093 | LOC_Os07g12890 | Os07g0232800 | - | Detail |
| CX7g049689 | 7:6,502,267-6,502,581 | + | - | - | - | - | - | Detail |
| CX7g049525 | 7:6,503,436-6,503,768 | + | - | - | - | - | - | Detail |
| CX7g049630 | 7:6,505,380-6,508,920 | - | C1H7g20763 | C2H7g01423 | LOC_Os07g12900 | Os07g0232900 | HMA3, OsHMA3, OsHMA3a, OsHMA3n, osHMA3 | Detail |
| CX7g047155 | 7:6,512,142-6,512,918 | + | C1H7g22364 | C2H7g02241 | - | Os07g0233200 | - | Detail |
| CX7g047399 | 7:6,514,810-6,517,879 | - | C1H7g03828 | C2H7g17520 | LOC_Os07g12910 | Os07g0233300 | - | Detail |
| CX7g047888 | 7:6,549,622-6,553,366 | + | C1H7g19486 | C2H7g22291 | LOC_Os07g13170 | Os07g0235800 | SNB, AP2/EREBP73, OsSNB | Detail |
| CX7g049276 | 7:6,559,807-6,560,028 | + | - | - | - | Os07g0616100 | - | Detail |
| CX7g046765 | 7:6,602,229-6,603,215 | - | C1H7g24592 | C2H7g18355 | LOC_Os07g13260 | Os07g0236700 | - | Detail |
| CX7g046569 | 7:6,633,634-6,638,568 | + | C1H7g18736 | C2H7g02587 | LOC_Os07g13270 | Os07g0236800 | - | Detail |
| CX7g046591 | 7:6,651,559-6,651,798 | - | C1H7g20300 | C2H7g10881 | LOC_Os07g13310 | Os07g0237200 | - | Detail |
| CX7g046484 | 7:6,672,942-6,673,511 | - | C1H7g10498 | - | LOC_Os07g13370 | Os07g0237900 | - | Detail |
| CX7g046873 | 7:6,705,343-6,707,926 | - | C1H7g20832 | C2H7g11470 | LOC_Os07g13490 | Os07g0239000 | - | Detail |
| CX7g048182 | 7:6,718,479-6,721,682 | - | C1H7g27972 | C2H7g15112 | LOC_Os07g13520 | Os07g0239200 | - | Detail |
| CX7g050229 | 7:6,722,904-6,726,012 | - | C1H7g07495 | C2H7g23533 | LOC_Os07g13530 | Os07g0239400 | - | Detail |