| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g07290 | 3:30,447,966-30,455,222 | - | C2H3g24386 | CX3g029999 | LOC_Os03g57160 | Os03g0785300 | - | Detail |
| C1H3g31468 | 3:30,455,537-30,457,515 | + | C2H3g16096 | CX3g025222 | LOC_Os03g57170 | Os03g0785500 | - | Detail |
| C1H3g09812 | 3:30,479,125-30,482,503 | + | C2H3g04828 | CX3g026845 | LOC_Os03g57210 | Os03g0786000 | - | Detail |
| C1H3g18801 | 3:30,483,838-30,487,350 | + | C2H3g03414 | CX3g026915 | LOC_Os03g57220 | Os03g0786100 | - | Detail |
| C1H3g21165 | 3:30,508,458-30,512,758 | - | C2H3g29782 | CX3g028697 | LOC_Os03g57260 | Os03g0786500 | - | Detail |
| C1H3g31737 | 3:30,516,983-30,522,171 | + | C2H3g21493 | CX3g030417 | LOC_Os03g57280 | Os03g0786700 | - | Detail |
| C1H3g24529 | 3:30,523,086-30,530,176 | + | C2H3g10038 | CX3g028623 | LOC_Os03g57290 | Os03g0786800 | OsCUL4 | Detail |
| C1H3g09796 | 3:30,530,578-30,541,947 | + | C2H3g05716 | CX3g029095 | LOC_Os03g57300 | Os03g0786900 | - | Detail |
| C1H3g02488 | 3:30,545,794-30,546,780 | + | C2H3g27192 | CX3g028386 | LOC_Os03g57310 | Os03g0787000 | OsSYP121 | Detail |
| C1H3g16088 | 3:30,547,496-30,549,708 | - | C2H3g21961 | CX3g030867 | LOC_Os03g57320 | Os03g0787100 | - | Detail |
| C1H3g27975 | 3:30,549,114-30,549,650 | + | - | - | - | - | - | Detail |
| C1H3g27493 | 3:30,550,771-30,554,669 | - | C2H3g21062 | CX3g026667 | LOC_Os03g57330 | Os03g0787200 | - | Detail |
| C1H3g15177 | 3:30,562,744-30,566,195 | + | C2H3g19623 | CX3g029651 | LOC_Os03g57340 | Os03g0787300 | OsDjA5 | Detail |
| C1H3g15799 | 3:30,570,399-30,571,056 | - | - | - | - | - | - | Detail |
| C1H3g31327 | 3:30,571,108-30,571,287 | - | - | - | - | - | - | Detail |
| C1H3g04736 | 3:30,573,063-30,573,365 | - | C2H3g03483 | CX3g028358 | LOC_Os03g57360 | Os03g0813700 | - | Detail |
| C1H3g08399 | 3:30,576,157-30,577,784 | - | C2H3g03483 | CX3g028358 | LOC_Os03g57400 | Os03g0788000 | - | Detail |
| C1H3g02833 | 3:30,580,252-30,580,872 | + | C2H3g16218 | CX3g028483 | LOC_Os03g57410 | Os03g0788100 | - | Detail |
| C1H3g09747 | 3:30,584,790-30,587,122 | + | C2H3g07607 | CX3g026498 | LOC_Os03g57420 | Os03g0788200 | OsMl-2, OsML-2 | Detail |
| C1H3g04463 | 3:30,589,970-30,600,977 | + | C2H3g07013 | CX3g025423 | LOC_Os03g57430 | Os03g0788300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g049933 | 7:6,450,579-6,451,128 | - | C1H7g06867 | C2H7g30315 | LOC_Os07g12820 | Os07g0232100 | OsREM20 | Detail |
| CX7g050072 | 7:6,462,458-6,465,266 | + | C1H7g25642 | C2H7g05202 | LOC_Os07g12830 | Os07g0232200 | - | Detail |
| CX7g046231 | 7:6,476,128-6,476,322 | + | - | - | - | - | - | Detail |
| CX7g048221 | 7:6,477,728-6,481,441 | + | C1H7g05603 | C2H7g19630 | LOC_Os07g12850 | Os07g0534500 | OsRLCK233 | Detail |
| CX7g048493 | 7:6,482,594-6,482,752 | + | - | - | - | Os07g0616100 | - | Detail |
| CX7g046316 | 7:6,498,221-6,501,529 | + | C1H7g02868 | C2H7g17093 | LOC_Os07g12890 | Os07g0232800 | - | Detail |
| CX7g049689 | 7:6,502,267-6,502,581 | + | - | - | - | - | - | Detail |
| CX7g049525 | 7:6,503,436-6,503,768 | + | - | - | - | - | - | Detail |
| CX7g049630 | 7:6,505,380-6,508,920 | - | C1H7g20763 | C2H7g01423 | LOC_Os07g12900 | Os07g0232900 | HMA3, OsHMA3, OsHMA3a, OsHMA3n, osHMA3 | Detail |
| CX7g047155 | 7:6,512,142-6,512,918 | + | C1H7g22364 | C2H7g02241 | - | Os07g0233200 | - | Detail |
| CX7g047399 | 7:6,514,810-6,517,879 | - | C1H7g03828 | C2H7g17520 | LOC_Os07g12910 | Os07g0233300 | - | Detail |
| CX7g047888 | 7:6,549,622-6,553,366 | + | C1H7g19486 | C2H7g22291 | LOC_Os07g13170 | Os07g0235800 | SNB, AP2/EREBP73, OsSNB | Detail |
| CX7g049276 | 7:6,559,807-6,560,028 | + | - | - | - | Os07g0616100 | - | Detail |
| CX7g046765 | 7:6,602,229-6,603,215 | - | C1H7g24592 | C2H7g18355 | LOC_Os07g13260 | Os07g0236700 | - | Detail |
| CX7g046569 | 7:6,633,634-6,638,568 | + | C1H7g18736 | C2H7g02587 | LOC_Os07g13270 | Os07g0236800 | - | Detail |
| CX7g046591 | 7:6,651,559-6,651,798 | - | C1H7g20300 | C2H7g10881 | LOC_Os07g13310 | Os07g0237200 | - | Detail |
| CX7g046484 | 7:6,672,942-6,673,511 | - | C1H7g10498 | - | LOC_Os07g13370 | Os07g0237900 | - | Detail |
| CX7g046873 | 7:6,705,343-6,707,926 | - | C1H7g20832 | C2H7g11470 | LOC_Os07g13490 | Os07g0239000 | - | Detail |
| CX7g048182 | 7:6,718,479-6,721,682 | - | C1H7g27972 | C2H7g15112 | LOC_Os07g13520 | Os07g0239200 | - | Detail |
| CX7g050229 | 7:6,722,904-6,726,012 | - | C1H7g07495 | C2H7g23533 | LOC_Os07g13530 | Os07g0239400 | - | Detail |