| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g00809 | 5:11,982,210-11,984,061 | - | C2H5g18962 | CX5g037533 | LOC_Os05g25560 | Os05g0319900 | - | Detail |
| C1H5g07771 | 5:12,001,890-12,004,026 | + | C2H5g16379 | CX5g040926 | LOC_Os05g25600 | Os05g0320300 | - | Detail |
| C1H5g18434 | 5:12,005,370-12,006,031 | + | C2H5g17208 | CX5g040614 | LOC_Os05g25620 | Os05g0320500 | - | Detail |
| C1H5g11691 | 5:12,012,645-12,014,131 | - | C2H5g12884 | CX5g040663 | LOC_Os05g25640 | Os05g0320700 | OsC4HL | Detail |
| C1H5g29408 | 5:12,015,766-12,016,554 | - | C2H5g12884 | CX5g040663 | LOC_Os05g25640 | Os05g0320700 | OsC4HL | Detail |
| C1H5g31853 | 5:12,053,670-12,054,445 | + | C2H5g23272 | CX5g039065 | - | Os05g0321900 | - | Detail |
| C1H5g21190 | 5:12,055,039-12,058,391 | + | C2H5g30247 | CX5g039065 | LOC_Os05g25770 | Os05g0321900 | - | Detail |
| C1H5g09562 | 5:12,072,384-12,073,544 | + | C2H5g20457 | CX5g039731 | LOC_Os05g25770 | Os05g0322900 | - | Detail |
| C1H5g20684 | 5:12,079,618-12,082,497 | + | C2H5g00966 | CX5g037483 | LOC_Os05g25780 | Os05g0323100 | - | Detail |
| C1H5g15138 | 5:12,088,755-12,088,970 | - | C2H5g12832 | CX5g037550 | LOC_Os05g25784 | Os05g0323400 | - | Detail |
| C1H5g03510 | 5:12,094,616-12,098,484 | + | C2H5g27944 | - | - | - | - | Detail |
| C1H5g02171 | 5:12,094,751-12,098,348 | - | C2H5g23193 | CX5g037938 | - | Os05g0475600 | - | Detail |
| C1H5g07569 | 5:12,110,411-12,114,059 | + | C2H5g25840 | CX5g038231 | LOC_Os05g25840 | Os05g0323800 | - | Detail |
| C1H5g09336 | 5:12,115,350-12,119,558 | + | C2H5g02562 | CX5g039355 | LOC_Os05g25850 | Os05g0323900 | SODA1, SodA1, Mn-SOD, Mn- SOD, OsMSD, OsMSD1 | Detail |
| C1H5g18365 | 5:12,121,188-12,122,633 | + | C2H5g29319 | CX5g038450 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| C1H5g16408 | 5:12,140,296-12,142,180 | + | C2H5g21674 | CX5g037596 | LOC_Os05g25170 | - | - | Detail |
| C1H5g24963 | 5:12,142,187-12,144,548 | + | C2H5g11879 | CX12g015435 | LOC_Os05g25170 | - | - | Detail |
| C1H5g19700 | 5:12,146,724-12,149,612 | + | C2H5g22294 | CX5g038330 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| C1H5g26142 | 5:12,149,959-12,153,426 | - | C2H5g05113 | CX5g040251 | LOC_Os05g25880 | Os05g0324200 | - | Detail |
| C1H5g26115 | 5:12,158,868-12,160,517 | + | C2H5g07422 | CX5g041147 | LOC_Os05g25890 | Os05g0324300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g049640 | 7:5,371,803-5,375,926 | + | C1H7g11446 | C2H7g07491 | LOC_Os07g10830 | Os07g0209000 | - | Detail |
| CX7g046186 | 7:5,377,220-5,380,211 | - | C1H7g13106 | C2H7g18286 | LOC_Os07g10840 | Os07g0209100 | - | Detail |
| CX7g046297 | 7:5,380,767-5,380,955 | + | - | - | - | Os07g0616100 | - | Detail |
| CX7g046583 | 7:5,385,780-5,385,971 | - | - | - | - | Os07g0137500 | - | Detail |
| CX7g049067 | 7:5,425,502-5,426,752 | + | C1H7g22752 | C2H7g26125 | LOC_Os07g10880 | Os07g0209700 | - | Detail |
| CX7g048487 | 7:5,476,308-5,477,550 | + | C1H7g22752 | C2H7g26125 | LOC_Os07g10880 | Os07g0209700 | - | Detail |
| CX7g049838 | 7:5,480,569-5,480,742 | - | - | - | - | Os02g0188201 | - | Detail |
| CX7g047335 | 7:5,482,432-5,486,268 | + | C1H7g20089 | C2H7g19591 | LOC_Os07g10890 | Os07g0209800 | - | Detail |
| CX7g046761 | 7:5,494,901-5,499,567 | + | C1H7g05690 | C2H7g26168 | LOC_Os07g10910 | Os07g0210000 | - | Detail |
| CX7g046937 | 7:5,500,206-5,501,360 | - | C1H7g08817 | C2H7g10850 | LOC_Os07g10920 | Os07g0210100 | - | Detail |
| CX7g048649 | 7:5,509,977-5,510,900 | - | C1H7g02576 | C2H7g17871 | LOC_Os07g10970 | Os07g0211000 | - | Detail |
| CX7g046794 | 7:5,528,964-5,537,000 | + | C1H7g22347 | C2H7g29712 | LOC_Os07g11000 | Os07g0211200 | - | Detail |
| CX7g050420 | 7:5,542,573-5,550,775 | + | C1H7g24316 | C2H7g21059 | LOC_Os07g11010 | Os07g0211400 | OsKAPP | Detail |
| CX7g046359 | 7:5,553,468-5,560,091 | + | C1H7g20534 | C2H7g08953 | LOC_Os07g11020 | Os07g0211500 | Rc | Detail |
| CX7g049198 | 7:5,560,992-5,561,177 | + | - | - | - | Os07g0596950 | - | Detail |
| CX7g048062 | 7:5,568,506-5,569,558 | + | - | C2H7g13592 | LOC_Os07g11050 | Os07g0211700 | - | Detail |
| CX7g049111 | 7:5,580,900-5,581,094 | - | - | - | - | Os07g0616100 | - | Detail |
| CX7g046560 | 7:5,589,257-5,596,344 | - | C1H7g07016 | C2H7g10582 | LOC_Os07g11060 | Os07g0211800 | - | Detail |
| CX7g046858 | 7:5,599,080-5,602,636 | - | C1H7g05061 | C2H7g13970 | LOC_Os07g11070 | Os07g0211900 | - | Detail |
| CX7g047558 | 7:5,610,593-5,616,541 | + | C1H7g13477 | C2H7g16955 | LOC_Os07g11110 | Os07g0212200 | - | Detail |