| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g06770 | 2:9,086,090-9,092,576 | - | C1H2g04839 | CX2g020121 | LOC_Os02g17460 | Os02g0274600 | - | Detail |
| C2H2g25557 | 2:9,094,416-9,095,481 | + | C1H2g13080 | - | - | - | - | Detail |
| C2H2g12255 | 2:9,097,550-9,100,200 | + | C1H2g13080 | CX2g019862 | LOC_Os02g17470 | Os02g0274700 | - | Detail |
| C2H2g07148 | 2:9,111,459-9,118,310 | + | C1H2g20851 | CX2g020679 | LOC_Os02g17500 | Os02g0274900 | - | Detail |
| C2H2g16988 | 2:9,123,672-9,124,927 | + | C1H2g27766 | CX2g021332 | LOC_Os02g17520 | Os02g0275100 | - | Detail |
| C2H2g25493 | 2:9,125,762-9,131,981 | - | C1H2g18414 | CX2g022654 | LOC_Os02g17534 | Os02g0275200 | - | Detail |
| C2H2g12406 | 2:9,138,853-9,140,072 | + | C1H2g18414 | CX2g022654 | LOC_Os02g17590 | - | - | Detail |
| C2H2g19414 | 2:9,144,370-9,146,293 | + | C1H2g18414 | CX2g022452 | LOC_Os02g17534 | Os02g0275200 | - | Detail |
| C2H2g11418 | 2:9,153,298-9,161,883 | - | C1H2g28570 | CX2g024094 | LOC_Os02g17620 | Os02g0276200 | - | Detail |
| C2H2g13253 | 2:9,188,438-9,191,184 | - | C1H2g09318 | CX2g019729 | LOC_Os02g17640 | Os02g0276400 | - | Detail |
| C2H2g02640 | 2:9,192,146-9,200,452 | - | C1H2g06211 | CX2g023106 | LOC_Os02g17650 | Os02g0276500 | OsVTE1 | Detail |
| C2H2g17601 | 2:9,224,532-9,226,293 | - | - | - | - | - | - | Detail |
| C2H2g21214 | 2:9,227,200-9,234,095 | - | C1H2g04949 | CX2g020993 | LOC_Os02g17680 | Os02g0276900 | - | Detail |
| C2H2g16961 | 2:9,244,502-9,246,511 | - | - | - | - | - | - | Detail |
| C2H2g07248 | 2:9,245,242-9,247,742 | + | C1H2g26261 | CX2g020060 | LOC_Os11g06800 | Os02g0231600 | - | Detail |
| C2H2g23233 | 2:9,251,488-9,256,684 | + | C1H2g06748 | CX2g023495 | LOC_Os02g17700 | Os02g0277600 | - | Detail |
| C2H2g21422 | 2:9,257,574-9,260,172 | - | C1H2g21417 | CX2g019451 | LOC_Os02g17710 | Os02g0277700 | - | Detail |
| C2H2g09294 | 2:9,267,786-9,272,819 | + | C1H2g04601 | CX2g022207 | LOC_Os02g17760 | Os02g0278400 | - | Detail |
| C2H2g18932 | 2:9,270,435-9,271,883 | - | - | - | - | Os02g0278450 | - | Detail |
| C2H2g03135 | 2:9,276,565-9,287,809 | - | C1H2g04831 | CX2g024821 | LOC_Os02g17780 | Os02g0278700 | OsCPS1, OsCPS1<sub>ent</sub> | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g048777 | 7:4,837,310-4,838,449 | + | C1H7g28388 | C2H7g04806 | LOC_Os07g09870 | Os07g0196900 | - | Detail |
| CX7g050075 | 7:4,845,121-4,848,210 | + | C1H7g03755 | C2H7g12253 | LOC_Os07g09890 | Os07g0197100 | OsHXK4 | Detail |
| CX7g049627 | 7:4,864,910-4,865,074 | - | - | - | - | Os07g0169100 | - | Detail |
| CX7g049031 | 7:4,871,312-4,875,037 | + | C1H7g07557 | C2H7g05933 | LOC_Os07g09970 | Os07g0198300 | - | Detail |
| CX7g049401 | 7:4,884,247-4,890,924 | + | C1H7g25381 | C2H7g01059 | LOC_Os07g10110 | Os07g0200000 | - | Detail |
| CX7g046824 | 7:4,896,528-4,898,540 | + | C1H7g28222 | C2H7g19604 | LOC_Os07g10120 | Os07g0199000 | - | Detail |
| CX7g049465 | 7:4,907,591-4,912,446 | + | C1H7g14136 | C2H7g26821 | LOC_Os07g10130 | Os07g0200700 | - | Detail |
| CX7g049999 | 7:4,913,144-4,913,611 | - | C1H7g20884 | C2H7g14852 | - | Os07g0200801 | - | Detail |
| CX7g046805 | 7:4,917,499-4,924,190 | + | C1H7g18018 | C2H7g15337 | LOC_Os07g10150 | Os07g0201100 | - | Detail |
| CX7g049057 | 7:4,925,477-4,925,680 | - | - | - | - | Os07g0616100 | - | Detail |
| CX7g047962 | 7:4,926,754-4,927,011 | - | - | - | - | - | - | Detail |
| CX7g049050 | 7:4,931,550-4,933,407 | + | C1H7g16889 | C2H7g23431 | LOC_Os07g10160 | Os07g0201300 | - | Detail |
| CX7g048405 | 7:4,951,122-4,953,101 | + | C1H7g07072 | C2H7g22813 | LOC_Os07g10190 | Os07g0201500 | - | Detail |
| CX7g049279 | 7:4,959,966-4,960,575 | - | - | C2H7g09089 | - | - | - | Detail |
| CX7g047593 | 7:4,981,472-4,983,058 | + | C1H7g24210 | C2H7g19489 | LOC_Os07g10190 | Os07g0201500 | - | Detail |
| CX7g049299 | 7:4,988,633-4,991,041 | + | C1H7g31892 | C2H7g01326 | LOC_Os07g10230 | Os07g0201800 | - | Detail |
| CX7g047721 | 7:5,003,236-5,004,717 | + | C1H7g31892 | C2H7g01937 | LOC_Os07g10240 | Os07g0202000 | - | Detail |
| CX7g047103 | 7:5,008,425-5,012,789 | - | C1H7g18653 | C2H7g00507 | LOC_Os07g10250 | Os07g0202100 | - | Detail |
| CX7g048740 | 7:5,013,943-5,014,389 | + | - | C2H7g06333 | LOC_Os07g10254 | Os07g0202400 | - | Detail |
| CX7g049789 | 7:5,016,012-5,018,325 | - | C1H7g11207 | C2H7g20580 | LOC_Os07g10256 | Os07g0202300 | - | Detail |