| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g27186 | 12:8,027,831-8,030,743 | - | - | - | - | - | - | Detail |
| C1H12g22810 | 12:8,032,441-8,033,926 | - | C2H3g23130 | - | - | - | - | Detail |
| C1H12g30337 | 12:8,046,615-8,050,263 | + | C2H12g15577 | CX12g015656 | LOC_Os12g16620 | - | - | Detail |
| C1H12g12690 | 12:8,062,533-8,063,063 | + | C2H12g13804 | CX12g016493 | LOC_Os12g16640 | Os12g0267100 | - | Detail |
| C1H12g01774 | 12:8,065,294-8,065,512 | - | - | - | - | - | - | Detail |
| C1H12g04576 | 12:8,065,437-8,074,333 | + | C2H12g25263 | CX12g016493 | LOC_Os12g16650 | Os12g0267200 | - | Detail |
| C1H12g20271 | 12:8,081,573-8,081,926 | + | - | - | - | - | - | Detail |
| C1H12g26358 | 12:8,081,955-8,082,293 | + | C2H12g29205 | CX12g015504 | LOC_Os12g16670 | Os12g0267500 | - | Detail |
| C1H12g26040 | 12:8,086,905-8,092,004 | - | C2H5g06041 | CX9g058196 | LOC_Os10g29274 | Os10g0428200 | - | Detail |
| C1H12g24303 | 12:8,098,217-8,098,549 | + | C2H12g22341 | CX12g016418 | LOC_Os12g16370 | - | - | Detail |
| C1H12g20439 | 12:8,103,063-8,105,960 | + | C2H12g01086 | CX12g016003 | LOC_Os12g16690 | Os12g0267900 | - | Detail |
| C1H12g24834 | 12:8,116,448-8,118,408 | - | C2H12g04535 | CX12g018224 | LOC_Os12g16720 | Os12g0268000 | SL, OsSL, CYP71P1, LLM1, CYP71A1, T5H | Detail |
| C1H12g27646 | 12:8,194,063-8,199,131 | - | C2H12g04709 | CX12g016443 | LOC_Os12g17070 | - | - | Detail |
| C1H12g23758 | 12:8,214,290-8,217,091 | + | C2H12g27718 | CX12g015910 | LOC_Os12g17080 | Os12g0270200 | OGR1, ogr1 | Detail |
| C1H12g29906 | 12:8,219,778-8,221,352 | - | C2H12g03089 | CX12g018649 | LOC_Os12g17090 | Os12g0270300 | - | Detail |
| C1H12g00865 | 12:8,235,806-8,236,450 | - | C2H12g03089 | CX12g016852 | LOC_Os12g17090 | Os12g0270675 | - | Detail |
| C1H12g14089 | 12:8,252,859-8,254,623 | - | C2H12g03089 | CX12g016852 | LOC_Os12g17140 | Os12g0270675 | - | Detail |
| C1H12g01259 | 12:8,274,379-8,275,645 | - | - | - | - | - | - | Detail |
| C1H12g31898 | 12:8,277,268-8,279,819 | + | - | - | - | Os12g0231600 | - | Detail |
| C1H12g17449 | 12:8,295,784-8,297,542 | - | C2H12g14706 | CX12g017972 | LOC_Os12g17160 | Os12g0270900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g048777 | 7:4,837,310-4,838,449 | + | C1H7g28388 | C2H7g04806 | LOC_Os07g09870 | Os07g0196900 | - | Detail |
| CX7g050075 | 7:4,845,121-4,848,210 | + | C1H7g03755 | C2H7g12253 | LOC_Os07g09890 | Os07g0197100 | OsHXK4 | Detail |
| CX7g049627 | 7:4,864,910-4,865,074 | - | - | - | - | Os07g0169100 | - | Detail |
| CX7g049031 | 7:4,871,312-4,875,037 | + | C1H7g07557 | C2H7g05933 | LOC_Os07g09970 | Os07g0198300 | - | Detail |
| CX7g049401 | 7:4,884,247-4,890,924 | + | C1H7g25381 | C2H7g01059 | LOC_Os07g10110 | Os07g0200000 | - | Detail |
| CX7g046824 | 7:4,896,528-4,898,540 | + | C1H7g28222 | C2H7g19604 | LOC_Os07g10120 | Os07g0199000 | - | Detail |
| CX7g049465 | 7:4,907,591-4,912,446 | + | C1H7g14136 | C2H7g26821 | LOC_Os07g10130 | Os07g0200700 | - | Detail |
| CX7g049999 | 7:4,913,144-4,913,611 | - | C1H7g20884 | C2H7g14852 | - | Os07g0200801 | - | Detail |
| CX7g046805 | 7:4,917,499-4,924,190 | + | C1H7g18018 | C2H7g15337 | LOC_Os07g10150 | Os07g0201100 | - | Detail |
| CX7g049057 | 7:4,925,477-4,925,680 | - | - | - | - | Os07g0616100 | - | Detail |
| CX7g047962 | 7:4,926,754-4,927,011 | - | - | - | - | - | - | Detail |
| CX7g049050 | 7:4,931,550-4,933,407 | + | C1H7g16889 | C2H7g23431 | LOC_Os07g10160 | Os07g0201300 | - | Detail |
| CX7g048405 | 7:4,951,122-4,953,101 | + | C1H7g07072 | C2H7g22813 | LOC_Os07g10190 | Os07g0201500 | - | Detail |
| CX7g049279 | 7:4,959,966-4,960,575 | - | - | C2H7g09089 | - | - | - | Detail |
| CX7g047593 | 7:4,981,472-4,983,058 | + | C1H7g24210 | C2H7g19489 | LOC_Os07g10190 | Os07g0201500 | - | Detail |
| CX7g049299 | 7:4,988,633-4,991,041 | + | C1H7g31892 | C2H7g01326 | LOC_Os07g10230 | Os07g0201800 | - | Detail |
| CX7g047721 | 7:5,003,236-5,004,717 | + | C1H7g31892 | C2H7g01937 | LOC_Os07g10240 | Os07g0202000 | - | Detail |
| CX7g047103 | 7:5,008,425-5,012,789 | - | C1H7g18653 | C2H7g00507 | LOC_Os07g10250 | Os07g0202100 | - | Detail |
| CX7g048740 | 7:5,013,943-5,014,389 | + | - | C2H7g06333 | LOC_Os07g10254 | Os07g0202400 | - | Detail |
| CX7g049789 | 7:5,016,012-5,018,325 | - | C1H7g11207 | C2H7g20580 | LOC_Os07g10256 | Os07g0202300 | - | Detail |