| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g30106 | 1:28,086,993-28,094,801 | + | C1H1g10866 | CX1g004902 | LOC_Os01g54910 | Os01g0752700 | - | Detail |
| C2H1g14113 | 1:28,096,618-28,100,262 | + | C1H1g19556 | - | - | - | - | Detail |
| C2H1g30674 | 1:28,101,470-28,105,320 | + | C1H1g31047 | CX1g005633 | LOC_Os01g43910 | Os01g0897000 | OsCDKB1;1 | Detail |
| C2H1g22228 | 1:28,106,499-28,109,530 | - | C1H1g19883 | CX1g003710 | LOC_Os01g54920 | Os01g0752800 | - | Detail |
| C2H1g29792 | 1:28,113,523-28,117,327 | - | C1H1g05885 | CX1g004059 | LOC_Os01g54930 | Os01g0753000 | OsVOZ1 | Detail |
| C2H1g17930 | 1:28,120,303-28,125,488 | + | C1H1g21710 | CX1g000869 | LOC_Os01g54940 | Os01g0753100 | - | Detail |
| C2H1g29811 | 1:28,126,195-28,130,622 | - | C1H1g22929 | CX1g006390 | LOC_Os01g54950 | Os01g0753150 | - | Detail |
| C2H1g20006 | 1:28,131,701-28,133,347 | + | C1H1g16292 | CX1g006340 | LOC_Os01g54969 | Os01g0753300 | OsASMT1 | Detail |
| C2H1g09497 | 1:28,133,635-28,139,651 | - | C1H1g07442 | CX1g002732 | LOC_Os01g54990 | Os01g0753500 | OsARF3lb | Detail |
| C2H1g17359 | 1:28,157,866-28,158,797 | + | C1H1g02806 | CX1g006658 | LOC_Os01g55020 | Os01g0754000 | - | Detail |
| C2H1g07609 | 1:28,160,970-28,162,766 | - | C1H1g16947 | CX1g002933 | LOC_Os01g55030 | Os01g0754100 | - | Detail |
| C2H1g07292 | 1:28,164,267-28,173,631 | - | C1H1g05578 | CX1g005591 | LOC_Os01g55040 | Os01g0754200 | - | Detail |
| C2H1g26542 | 1:28,173,942-28,178,857 | - | C1H1g11544 | CX1g006946 | LOC_Os01g55050 | Os01g0754500 | - | Detail |
| C2H1g25651 | 1:28,210,538-28,219,018 | - | C1H1g27304 | CX1g006404 | LOC_Os01g55094 | Os01g0755100 | - | Detail |
| C2H1g07282 | 1:28,222,260-28,229,222 | + | C1H1g29987 | CX1g000336 | LOC_Os01g55100 | Os01g0755500 | OsPCF7, PCF7 | Detail |
| C2H1g26286 | 1:28,269,737-28,272,246 | - | C1H1g10544 | CX1g005575 | LOC_Os01g55120 | Os01g0756000 | - | Detail |
| C2H1g10412 | 1:28,276,740-28,277,501 | - | C1H1g11346 | - | LOC_Os01g55140 | Os01g0756101 | - | Detail |
| C2H1g26594 | 1:28,277,519-28,277,863 | - | - | - | - | - | - | Detail |
| C2H1g27103 | 1:28,279,910-28,280,341 | + | C1H1g21888 | CX1g006243 | LOC_Os01g55150 | Os01g0756200 | - | Detail |
| C2H1g14895 | 1:28,281,075-28,282,001 | + | C1H1g31515 | CX1g006243 | LOC_Os01g55150 | Os01g0756200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g050362 | 7:4,236,327-4,240,488 | + | C1H7g21233 | C2H7g09570 | LOC_Os07g08790 | Os07g0185432 | - | Detail |
| CX7g049699 | 7:4,248,576-4,256,194 | + | C1H7g04399 | C2H7g02745 | LOC_Os07g08810 | Os07g0185700 | - | Detail |
| CX7g048108 | 7:4,260,054-4,263,309 | + | C1H7g17793 | C2H7g29336 | LOC_Os07g08820 | Os07g0185800 | - | Detail |
| CX7g049557 | 7:4,276,756-4,277,818 | + | - | - | - | - | - | Detail |
| CX7g047579 | 7:4,281,316-4,283,123 | - | C1H7g15110 | C2H7g30045 | LOC_Os07g08840 | Os07g0186000 | TRXH, trxh, Trx-H, OsTRXh1, OsTrxh1, Os1, OsTrx23, RPP13-1 | Detail |
| CX7g048745 | 7:4,291,898-4,293,299 | + | C1H7g28388 | C2H7g04806 | LOC_Os07g09870 | Os07g0196900 | - | Detail |
| CX7g046706 | 7:4,298,411-4,300,927 | - | C1H7g16802 | C2H7g25400 | LOC_Os07g08860 | Os07g0186200 | SDRLK-SIK2, SIK2, OsSIK2, YK14 | Detail |
| CX7g047241 | 7:4,305,262-4,317,811 | + | C1H7g06257 | C2H7g00916 | LOC_Os07g08880 | Os07g0186400 | OsSHL1 | Detail |
| CX7g047294 | 7:4,320,518-4,326,283 | + | C1H7g14544 | C2H7g24828 | LOC_Os07g08950 | Os07g0187200 | OsD-LDH2 | Detail |
| CX7g049916 | 7:4,327,374-4,330,007 | - | C1H7g26846 | C2H7g12614 | LOC_Os07g08960 | Os07g0549800 | - | Detail |
| CX7g048853 | 7:4,331,151-4,334,998 | - | C1H7g27888 | C2H7g29149 | LOC_Os07g08970 | Os07g0187400 | - | Detail |
| CX7g047749 | 7:4,339,461-4,343,229 | + | C1H7g28076 | C2H7g29227 | LOC_Os07g09000 | Os07g0187700 | PHF1, OsPHF1, OsWD40-137, OsSEC12 | Detail |
| CX7g048678 | 7:4,353,854-4,355,755 | + | - | C2H7g04045 | LOC_Os07g09010 | Os07g0187900 | - | Detail |
| CX7g050137 | 7:4,360,534-4,370,533 | - | C1H7g18469 | C2H7g16781 | LOC_Os07g09020 | Os07g0188000 | - | Detail |
| CX7g048045 | 7:4,381,661-4,384,213 | + | C1H7g07933 | C2H7g28352 | LOC_Os07g09040 | Os07g0188233 | - | Detail |
| CX7g049512 | 7:4,385,244-4,386,660 | + | C1H7g27796 | C2H7g22140 | LOC_Os07g09040 | Os07g0188266 | - | Detail |
| CX7g048570 | 7:4,389,795-4,393,249 | + | C1H7g22647 | C2H7g15428 | LOC_Os07g09050 | Os07g0188700 | - | Detail |
| CX7g050262 | 7:4,395,644-4,402,367 | + | C1H7g27182 | C2H7g12617 | LOC_Os07g09060 | Os07g0188800 | - | Detail |
| CX7g050068 | 7:4,410,053-4,411,725 | - | C1H7g00471 | C2H7g28551 | LOC_Os07g09120 | - | - | Detail |
| CX7g047473 | 7:4,421,767-4,422,913 | + | C1H7g03181 | C2H7g19166 | LOC_Os07g09140 | Os07g0189700 | - | Detail |