| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g24824 | 2:3,441,001-3,443,616 | - | C1H2g22189 | CX2g024836 | LOC_Os02g07670 | Os02g0173000 | - | Detail |
| C2H2g00550 | 2:3,446,779-3,453,230 | + | C1H2g28731 | CX2g022349 | LOC_Os02g07680 | Os02g0173100 | - | Detail |
| C2H2g04564 | 2:3,466,591-3,470,581 | + | C1H2g05749 | CX2g021850 | LOC_Os02g07720 | Os02g0173500 | - | Detail |
| C2H2g25488 | 2:3,473,477-3,474,885 | + | C1H2g20583 | CX2g022008 | LOC_Os02g07730 | Os02g0173600 | - | Detail |
| C2H2g25277 | 2:3,475,547-3,479,727 | + | C1H2g11719 | CX2g022408 | LOC_Os02g07740 | Os02g0173700 | - | Detail |
| C2H2g05358 | 2:3,479,779-3,483,687 | - | C1H2g13144 | CX2g019306 | LOC_Os02g07750 | Os02g0173800 | - | Detail |
| C2H2g15147 | 2:3,485,820-3,493,530 | + | C1H2g30476 | CX2g022443 | LOC_Os02g07760 | Os02g0173900 | - | Detail |
| C2H2g30059 | 2:3,499,284-3,501,532 | - | C1H2g17525 | CX2g021568 | LOC_Os02g07770 | Os02g0174000 | OsAPL | Detail |
| C2H2g18280 | 2:3,514,516-3,518,041 | + | C1H2g14780 | CX2g018842 | LOC_Os02g07780 | Os02g0174100 | - | Detail |
| C2H2g26229 | 2:3,519,233-3,522,261 | - | C1H2g19613 | CX2g023354 | LOC_Os02g07790 | Os02g0174200 | OsDPK2 | Detail |
| C2H2g20308 | 2:3,523,498-3,525,979 | + | C1H2g30350 | CX2g022416 | LOC_Os02g07800 | Os02g0174300 | - | Detail |
| C2H2g01221 | 2:3,526,704-3,529,643 | + | C1H2g08878 | CX2g024880 | LOC_Os02g07810 | Os02g0174400 | - | Detail |
| C2H2g00728 | 2:3,535,527-3,537,625 | + | C1H2g02250 | CX2g023598 | LOC_Os02g07820 | Os02g0174800 | - | Detail |
| C2H2g16638 | 2:3,540,178-3,543,174 | + | C1H2g14484 | CX2g023627 | LOC_Os02g07830 | Os02g0175000 | HKT6, OsHKT6, OsHKT1;3 | Detail |
| C2H2g09018 | 2:3,548,013-3,550,777 | + | C1H2g18593 | CX2g020712 | LOC_Os02g07840 | Os02g0175100 | RISBZ4 | Detail |
| C2H2g04831 | 2:3,551,235-3,554,184 | - | C1H2g09443 | CX2g023186 | LOC_Os02g07850 | Os02g0175200 | - | Detail |
| C2H2g15931 | 2:3,560,500-3,567,958 | + | C1H2g02033 | CX2g019528 | LOC_Os02g07870 | Os02g0175400 | - | Detail |
| C2H2g27332 | 2:3,569,517-3,574,214 | + | - | - | - | - | - | Detail |
| C2H2g23705 | 2:3,579,835-3,583,643 | - | C1H2g07080 | CX2g019494 | LOC_Os02g07900 | Os02g0175700 | OsANTH3 | Detail |
| C2H2g17525 | 2:3,584,868-3,586,687 | + | C1H2g29388 | CX2g023593 | LOC_Os02g07910 | Os02g0175800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g046571 | 7:4,052,128-4,055,102 | - | C1H7g03783 | C2H7g16319 | LOC_Os07g08430 | Os07g0182100 | - | Detail |
| CX7g048076 | 7:4,056,443-4,056,646 | - | - | - | - | Os07g0616100 | - | Detail |
| CX7g046025 | 7:4,060,578-4,063,452 | + | C1H7g22816 | C2H7g13219 | LOC_Os07g08440 | Os07g0182200 | - | Detail |
| CX7g048026 | 7:4,081,863-4,083,532 | - | C1H7g08147 | C2H7g21054 | LOC_Os07g08460 | Os07g0182400 | - | Detail |
| CX7g049865 | 7:4,090,596-4,090,796 | - | - | - | - | - | - | Detail |
| CX7g049402 | 7:4,106,838-4,107,626 | - | C1H7g08163 | C2H7g27628 | - | - | - | Detail |
| CX7g047392 | 7:4,112,008-4,121,264 | + | C1H7g17559 | C2H7g01878 | LOC_Os07g08500 | Os07g0182900 | MET1B, OsMET1b | Detail |
| CX7g050104 | 7:4,149,935-4,151,327 | + | - | C2H7g18951 | LOC_Os07g08510 | Os07g0184200 | - | Detail |
| CX7g049817 | 7:4,158,338-4,161,984 | - | C1H7g01208 | C2H7g05997 | LOC_Os07g08520 | Os07g0183100 | - | Detail |
| CX7g047842 | 7:4,162,628-4,164,100 | + | C1H7g01935 | C2H7g13555 | LOC_Os07g08530 | Os07g0183200 | - | Detail |
| CX7g049514 | 7:4,174,237-4,174,611 | - | - | - | - | - | - | Detail |
| CX7g047133 | 7:4,179,605-4,180,966 | + | C1H7g14715 | C2H7g18951 | LOC_Os07g08650 | Os07g0184200 | - | Detail |
| CX7g049244 | 7:4,183,411-4,184,963 | - | C1H7g03119 | C2H7g11185 | LOC_Os07g08660 | Os03g0798600 | - | Detail |
| CX7g049195 | 7:4,185,404-4,186,367 | + | C1H7g12552 | C2H7g14513 | LOC_Os07g05010 | Os07g0143200 | OsPIF14, OsPIF14β, OsPIF14b, PIL14 | Detail |
| CX7g047879 | 7:4,187,097-4,187,549 | - | - | - | - | - | - | Detail |
| CX7g047415 | 7:4,193,325-4,194,877 | + | C1H7g16015 | C2H7g06349 | LOC_Os07g08710 | Os07g0184800 | OsATH1 | Detail |
| CX7g046514 | 7:4,195,668-4,203,257 | + | C1H7g09330 | C2H7g15936 | LOC_Os07g08729 | Os07g0184900 | - | Detail |
| CX7g048929 | 7:4,206,903-4,209,128 | - | C1H7g00026 | C2H7g05786 | LOC_Os07g08750 | Os07g0185000 | - | Detail |
| CX7g050270 | 7:4,211,577-4,215,429 | - | C1H7g02270 | C2H7g20869 | LOC_Os07g08760 | Os07g0185200 | - | Detail |
| CX7g046271 | 7:4,220,698-4,221,225 | - | - | C2H7g07159 | LOC_Os07g08770 | Os07g0185300 | - | Detail |