| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g16494 | 5:2,395,316-2,397,937 | + | C1H5g12513 | CX5g040805 | LOC_Os05g05690 | Os05g0149500 | - | Detail |
| C2H5g25711 | 5:2,398,498-2,405,119 | - | C1H5g08311 | CX5g038928 | LOC_Os05g05700 | Os05g0149600 | OsCUL1-2 | Detail |
| C2H5g15844 | 5:2,410,866-2,416,815 | + | C1H5g22304 | CX5g038404 | LOC_Os05g05710 | Os05g0149800 | - | Detail |
| C2H5g18610 | 5:2,417,654-2,423,555 | + | C1H5g26443 | CX5g036871 | LOC_Os05g05720 | Os05g0149900 | - | Detail |
| C2H5g00389 | 5:2,427,101-2,427,911 | - | C1H5g12097 | CX5g037725 | - | - | - | Detail |
| C2H5g17068 | 5:2,429,760-2,432,603 | - | C1H5g19233 | CX5g039274 | LOC_Os05g05740 | Os05g0150000 | HTH5, PLPHP | Detail |
| C2H5g22435 | 5:2,436,046-2,445,994 | + | C1H5g21935 | CX5g036676 | LOC_Os05g05780 | Os05g0150300 | OsCHR727, CHR727 | Detail |
| C2H5g24081 | 5:2,446,403-2,450,978 | - | C1H5g05513 | CX5g040936 | LOC_Os05g05790 | Os05g0150400 | OsDRB3 | Detail |
| C2H5g02158 | 5:2,454,497-2,460,286 | - | C1H5g15222 | CX5g037178 | LOC_Os05g05800 | Os05g0150500 | TIR1, OsTIR1 | Detail |
| C2H5g00353 | 5:2,468,439-2,475,338 | - | C1H5g02062 | CX5g037551 | LOC_Os05g05810 | Os05g0150600 | OsRecQsim | Detail |
| C2H5g07952 | 5:2,478,110-2,480,103 | + | C1H5g14118 | CX5g037127 | LOC_Os05g05820 | Os05g0150733 | - | Detail |
| C2H5g03107 | 5:2,487,595-2,488,250 | + | C1H5g05063 | CX5g038863 | - | - | - | Detail |
| C2H5g01035 | 5:2,489,406-2,491,762 | + | C1H5g29614 | CX5g038779 | LOC_Os05g05830 | Os05g0150800 | - | Detail |
| C2H5g22602 | 5:2,491,846-2,495,963 | - | C1H5g12853 | CX5g040193 | LOC_Os05g05840 | Os05g0150900 | - | Detail |
| C2H5g00665 | 5:2,499,333-2,508,472 | - | C1H5g17386 | CX5g038309 | LOC_Os05g05860 | Os05g0151000 | - | Detail |
| C2H5g27389 | 5:2,510,435-2,511,543 | + | C1H5g18065 | CX5g039485 | LOC_Os05g05920 | Os05g0151100 | - | Detail |
| C2H5g27407 | 5:2,514,071-2,515,859 | - | C1H5g06297 | CX5g039472 | LOC_Os05g05940 | Os05g0151300 | - | Detail |
| C2H5g21053 | 5:2,516,863-2,521,275 | - | C1H5g06792 | CX5g040146 | LOC_Os05g05950 | Os05g0151400 | - | Detail |
| C2H5g20384 | 5:2,531,085-2,540,050 | + | C1H5g01718 | CX5g040030 | LOC_Os05g05980 | Os01g0530366 | - | Detail |
| C2H5g23909 | 5:2,558,237-2,558,773 | + | - | CX5g039592 | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g047915 | 7:3,877,841-3,880,060 | + | C1H7g01924 | C2H7g20186 | LOC_Os07g08180 | Os07g0179000 | - | Detail |
| CX7g049566 | 7:3,895,261-3,901,109 | + | C1H7g10978 | C2H7g23835 | LOC_Os07g08190 | Os07g0179200 | - | Detail |
| CX7g050172 | 7:3,901,955-3,905,077 | - | C1H7g06848 | C2H7g05934 | LOC_Os07g08200 | Os07g0179300 | - | Detail |
| CX7g047034 | 7:3,905,735-3,907,529 | - | C1H7g26542 | C2H7g00308 | LOC_Os07g08210 | Os07g0179400 | - | Detail |
| CX7g047311 | 7:3,908,600-3,908,752 | + | - | - | - | Os07g0616100 | - | Detail |
| CX7g047734 | 7:3,912,031-3,913,627 | - | C1H7g09504 | C2H7g13898 | LOC_Os07g08220 | Os07g0179500 | - | Detail |
| CX7g048218 | 7:3,921,265-3,923,140 | + | C1H7g23664 | C2H7g18205 | LOC_Os07g08240 | Os07g0179700 | - | Detail |
| CX7g046298 | 7:3,926,573-3,926,788 | - | - | - | - | Os07g0137500 | - | Detail |
| CX7g046137 | 7:3,944,169-3,946,073 | + | C1H7g30743 | C2H7g09181 | LOC_Os07g08270 | Os07g0180100 | - | Detail |
| CX7g046391 | 7:3,954,896-3,956,899 | - | C1H7g30743 | C2H7g09537 | LOC_Os07g08290 | Os07g0180300 | - | Detail |
| CX7g048932 | 7:3,964,689-3,965,081 | + | - | - | - | - | - | Detail |
| CX7g050234 | 7:3,968,276-3,974,750 | + | C1H7g28767 | C2H7g14295 | LOC_Os07g08300 | Os07g0180700 | - | Detail |
| CX7g048616 | 7:3,976,415-3,981,469 | - | C1H7g13962 | C2H7g08670 | LOC_Os07g08320 | Os07g0180800 | - | Detail |
| CX7g049583 | 7:3,985,333-3,987,436 | + | C1H7g29719 | C2H7g09679 | LOC_Os07g08330 | Os07g0180900 | - | Detail |
| CX7g049028 | 7:3,988,681-3,993,246 | + | C1H7g24341 | C2H7g29658 | LOC_Os07g08340 | Os07g0181000 | OsPKpa1, OsPKpα1, OsPK2 | Detail |
| CX7g048472 | 7:4,004,988-4,007,800 | + | C1H7g26065 | C2H7g12910 | LOC_Os07g08350 | Os07g0181100 | - | Detail |
| CX7g049670 | 7:4,028,242-4,029,554 | + | C1H7g17642 | C2H7g23846 | LOC_Os07g08390 | Os07g0181500 | OsDUF50607 | Detail |
| CX7g046969 | 7:4,035,328-4,040,810 | + | C1H7g23342 | C2H7g25719 | LOC_Os07g08400 | Os07g0181700 | - | Detail |
| CX7g046289 | 7:4,041,433-4,042,530 | - | C1H7g08798 | C2H7g08382 | LOC_Os07g08410 | Os07g0181800 | - | Detail |
| CX7g049987 | 7:4,044,787-4,048,693 | - | C1H7g04211 | C2H7g24851 | LOC_Os07g08420 | Os07g0182000 | RISBZ1, OsbZIP58, OsEnS-92 | Detail |