| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g22239 | 9:15,387,857-15,388,476 | + | - | CX9g056123 | - | - | - | Detail |
| C1H9g10463 | 9:15,390,930-15,396,579 | - | C2H9g25938 | CX9g055724 | LOC_Os09g31090 | Os09g0484300 | - | Detail |
| C1H9g25991 | 9:15,404,902-15,405,309 | + | - | CX9g056981 | LOC_Os09g31100 | - | - | Detail |
| C1H9g21053 | 9:15,411,915-15,412,343 | + | C2H9g09529 | CX9g056137 | LOC_Os09g31120 | Os09g0484800 | - | Detail |
| C1H9g25716 | 9:15,412,962-15,413,769 | + | C2H9g09529 | CX9g056137 | LOC_Os09g31120 | Os09g0484800 | - | Detail |
| C1H9g21552 | 9:15,420,705-15,423,279 | + | C2H9g06729 | CX9g055844 | LOC_Os09g31130 | Os09g0484900 | - | Detail |
| C1H9g28280 | 9:15,445,388-15,450,064 | + | C2H9g05554 | CX9g057232 | LOC_Os09g31140 | Os09g0485600 | - | Detail |
| C1H9g16686 | 9:15,458,593-15,459,470 | + | C2H9g12865 | CX9g057421 | LOC_Os09g31170 | Os09g0485800 | - | Detail |
| C1H9g09571 | 9:15,459,801-15,461,525 | - | C2H9g08271 | CX9g056446 | LOC_Os09g31180 | Os09g0485900 | - | Detail |
| C1H9g07652 | 9:15,461,954-15,462,514 | + | C2H9g15653 | - | LOC_Os09g31190 | Os09g0486000 | - | Detail |
| C1H9g10100 | 9:15,467,286-15,467,780 | + | C2H9g10052 | CX9g058060 | LOC_Os09g31200 | Os09g0486500 | SAP1, Osi-SAP1, ISAP1, OsiSAP1, OSISAP1, OsSAP1 | Detail |
| C1H9g04466 | 9:15,478,347-15,479,720 | + | C2H9g09908 | CX9g056228 | LOC_Os09g31210 | Os09g0486700 | OsAGC18 | Detail |
| C1H9g26143 | 9:15,487,243-15,492,467 | - | C2H9g06324 | CX9g057251 | LOC_Os09g31230 | Os09g0487200 | - | Detail |
| C1H9g26058 | 9:15,500,570-15,500,923 | - | C2H8g28041 | CX9g055951 | LOC_Os09g31260 | Os09g0487500 | - | Detail |
| C1H9g29280 | 9:15,501,853-15,504,293 | - | C2H9g10558 | CX9g058148 | LOC_Os09g31270 | Os09g0487600 | - | Detail |
| C1H9g01267 | 9:15,507,404-15,510,950 | + | C2H9g06481 | CX9g055842 | LOC_Os09g31280 | Os09g0487700 | - | Detail |
| C1H9g18482 | 9:15,516,863-15,517,405 | + | C2H9g17245 | CX9g055017 | LOC_Os09g31300 | Os09g0487900 | OsbHLH130 | Detail |
| C1H9g06099 | 9:15,517,524-15,518,950 | + | C2H9g27532 | CX9g055017 | LOC_Os09g31300 | Os09g0487900 | OsbHLH130 | Detail |
| C1H9g24450 | 9:15,527,398-15,527,895 | - | - | CX9g056925 | LOC_Os09g31310 | Os09g0488000 | OsGNA1 | Detail |
| C1H9g04944 | 9:15,542,267-15,544,409 | + | C2H9g14003 | CX9g057197 | LOC_Os09g31350 | Os09g0488600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g048220 | 7:3,594,157-3,594,477 | - | - | C2H7g15810 | - | - | - | Detail |
| CX7g047852 | 7:3,596,722-3,596,907 | + | - | - | - | - | - | Detail |
| CX7g049326 | 7:3,606,212-3,613,243 | + | C1H7g28770 | C2H7g24659 | LOC_Os07g07690 | Os07g0173300 | qCTB7 | Detail |
| CX7g047641 | 7:3,614,934-3,617,157 | + | C1H7g17950 | C2H7g08656 | LOC_Os07g07709 | Os07g0173501 | - | Detail |
| CX7g047833 | 7:3,619,674-3,620,150 | + | - | - | LOC_Os07g07750 | Os07g0173601 | - | Detail |
| CX7g046457 | 7:3,623,962-3,624,607 | + | C1H7g09786 | C2H7g02287 | LOC_Os07g07790 | Os07g0174400 | - | Detail |
| CX7g048042 | 7:3,626,932-3,631,524 | - | C1H7g03963 | C2H7g29174 | - | Os07g0631500 | - | Detail |
| CX7g048263 | 7:3,630,972-3,631,688 | + | - | C2H7g03950 | - | - | - | Detail |
| CX7g050345 | 7:3,633,330-3,634,397 | + | C1H7g03174 | C2H7g20911 | LOC_Os07g07820 | Os07g0174700 | - | Detail |
| CX7g046640 | 7:3,639,140-3,639,982 | - | C1H7g07934 | - | - | - | - | Detail |
| CX7g049495 | 7:3,651,061-3,652,207 | - | C1H7g15766 | C2H7g11292 | LOC_Os07g07860 | Os07g0174900 | - | Detail |
| CX7g046337 | 7:3,654,667-3,654,918 | - | - | - | - | - | - | Detail |
| CX7g046117 | 7:3,655,120-3,655,897 | + | C1H7g00850 | C2H7g16926 | LOC_Os07g07870 | Os07g0175000 | - | Detail |
| CX7g049148 | 7:3,657,749-3,659,172 | - | C1H7g08859 | C2H7g10004 | LOC_Os07g07880 | Os07g0175100 | POW1 | Detail |
| CX7g049830 | 7:3,664,847-3,665,071 | + | - | C2H7g01222 | LOC_Os07g07890 | Os07g0175200 | - | Detail |
| CX7g046841 | 7:3,665,911-3,667,617 | - | C1H7g05106 | C2H7g17092 | LOC_Os07g07900 | Os07g0175300 | POST | Detail |
| CX7g048003 | 7:3,676,658-3,679,327 | + | C1H7g15384 | C2H7g05371 | LOC_Os07g05560 | Os07g0150000 | - | Detail |
| CX7g047208 | 7:3,681,094-3,686,213 | + | C1H7g22074 | C2H7g21726 | LOC_Os07g07910 | Os07g0175400 | - | Detail |
| CX7g046140 | 7:3,687,030-3,688,396 | + | C1H7g12789 | C2H7g02419 | LOC_Os07g07920 | Os07g0175500 | - | Detail |
| CX7g050173 | 7:3,690,775-3,691,483 | + | C1H7g31526 | C2H7g24629 | LOC_Os07g07930 | Os07g0175600 | - | Detail |