| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g22765 | 2:28,236,918-28,237,175 | - | C1H2g07594 | CX2g023200 | - | Os02g0736700 | - | Detail |
| C2H2g11611 | 2:28,240,281-28,240,817 | - | - | CX2g022254 | - | Os02g0736900 | - | Detail |
| C2H2g25731 | 2:28,245,225-28,245,455 | + | - | - | LOC_Os02g50400 | Os02g0737300 | - | Detail |
| C2H2g21919 | 2:28,251,181-28,251,420 | + | C1H2g14249 | - | LOC_Os02g50450 | Os02g0738100 | - | Detail |
| C2H2g10969 | 2:28,257,712-28,259,079 | - | C1H2g14103 | CX2g023707 | LOC_Os02g50460 | Os02g0738200 | - | Detail |
| C2H2g16308 | 2:28,277,648-28,283,562 | + | C1H2g00500 | CX2g021204 | LOC_Os02g50480 | Os02g0738400 | OHK5, OHK5, Ohk5, OsHK1, OsHK6, HK, Crl1a | Detail |
| C2H2g12754 | 2:28,294,300-28,298,676 | + | C1H2g09387 | CX2g020936 | LOC_Os02g50490 | Os02g0738600 | - | Detail |
| C2H2g25440 | 2:28,300,139-28,310,024 | - | C1H2g28406 | CX2g022539 | LOC_Os02g50550 | Os02g0738900 | BC3, bc3, bc-3, OsDRP2B, DRP2B | Detail |
| C2H2g10338 | 2:28,311,660-28,320,928 | + | C1H2g06055 | CX2g024755 | LOC_Os02g50560 | Os02g0739000 | - | Detail |
| C2H2g19070 | 2:28,320,855-28,325,288 | - | C1H2g22155 | CX2g024527 | LOC_Os02g50570 | Os02g0739100 | - | Detail |
| C2H2g12798 | 2:28,334,593-28,335,726 | - | C1H2g26267 | CX2g023617 | LOC_Os02g50600 | Os02g0739400 | - | Detail |
| C2H2g13279 | 2:28,345,355-28,349,094 | - | C1H2g19740 | CX2g023255 | LOC_Os02g50620 | Os02g0739600 | - | Detail |
| C2H2g20599 | 2:28,350,795-28,353,624 | - | C1H2g02446 | CX2g021394 | LOC_Os02g50630 | Os02g0739700 | OsE2Fe-1 | Detail |
| C2H2g22496 | 2:28,356,473-28,360,636 | - | C1H2g01602 | CX2g023514 | LOC_Os02g50640 | Os02g0739900 | - | Detail |
| C2H2g07910 | 2:28,375,801-28,381,895 | - | C1H2g14498 | CX2g021304 | LOC_Os02g50680 | Os02g0740300 | - | Detail |
| C2H2g25866 | 2:28,382,669-28,384,104 | - | C1H2g26149 | CX2g024066 | LOC_Os02g50690 | Os02g0740400 | - | Detail |
| C2H2g26692 | 2:28,387,924-28,388,874 | + | C1H2g27425 | CX2g023069 | LOC_Os02g50700 | Os02g0740500 | - | Detail |
| C2H2g23006 | 2:28,390,599-28,390,880 | - | C1H2g04140 | CX2g024544 | LOC_Os02g50710 | Os02g0740600 | - | Detail |
| C2H2g13251 | 2:28,392,972-28,393,480 | + | - | - | - | - | - | Detail |
| C2H2g10045 | 2:28,393,015-28,394,133 | - | - | CX2g019920 | LOC_Os02g50730 | Os02g0740700 | OsMMP1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g047636 | 7:3,473,440-3,473,799 | - | C1H7g25554 | - | - | Os07g0170049 | - | Detail |
| CX7g047710 | 7:3,474,405-3,477,977 | - | C1H7g14072 | C2H7g06992 | LOC_Os07g07470 | Os07g0170100 | - | Detail |
| CX7g050139 | 7:3,479,810-3,481,529 | + | C1H7g03028 | C2H7g22441 | LOC_Os07g07480 | Os07g0170200 | - | Detail |
| CX7g047632 | 7:3,482,338-3,486,469 | - | C1H7g23823 | C2H7g19147 | LOC_Os07g07490 | Os07g0170300 | YTH10 | Detail |
| CX7g048057 | 7:3,489,444-3,490,386 | - | C1H7g11614 | C2H7g13685 | LOC_Os07g07500 | Os07g0170500 | - | Detail |
| CX7g049444 | 7:3,497,399-3,498,621 | + | - | C2H7g11204 | LOC_Os07g04120 | Os07g0162450 | - | Detail |
| CX7g047542 | 7:3,497,410-3,497,679 | - | - | C2H3g26421 | - | - | - | Detail |
| CX7g049154 | 7:3,499,248-3,503,613 | + | C1H7g24798 | C2H7g26640 | LOC_Os07g07520 | Os07g0170800 | - | Detail |
| CX7g050412 | 7:3,509,549-3,513,408 | + | - | - | LOC_Os07g07530 | Os07g0170900 | - | Detail |
| CX7g046745 | 7:3,515,631-3,517,199 | + | C1H7g24634 | C2H7g19751 | LOC_Os07g07540 | Os07g0171100 | OsXb22a | Detail |
| CX7g048847 | 7:3,518,169-3,522,133 | - | C1H7g06195 | C2H7g02309 | LOC_Os07g07550 | Os07g0171200 | - | Detail |
| CX7g049998 | 7:3,528,467-3,533,683 | + | C1H7g31145 | C2H7g29706 | LOC_Os07g07560 | Os07g0171300 | - | Detail |
| CX7g047532 | 7:3,545,520-3,548,585 | + | C1H7g26306 | C2H7g14506 | LOC_Os07g07580 | Os07g0172200 | - | Detail |
| CX7g046091 | 7:3,556,039-3,558,669 | - | C1H7g14038 | C2H7g26589 | LOC_Os07g07610 | Os07g0172500 | - | Detail |
| CX7g047681 | 7:3,559,812-3,562,415 | - | C1H7g15384 | C2H7g16081 | LOC_Os07g07620 | Os07g0172600 | OsSLA4 | Detail |
| CX7g048440 | 7:3,564,392-3,565,406 | - | C1H7g23957 | C2H7g12745 | LOC_Os07g07630 | - | - | Detail |
| CX7g047050 | 7:3,574,188-3,576,269 | + | C1H7g10408 | C2H7g07270 | LOC_Os07g07646 | Os03g0795100 | - | Detail |
| CX7g046232 | 7:3,577,158-3,582,376 | + | C1H7g05797 | C2H7g02138 | LOC_Os07g07654 | Os07g0172900 | - | Detail |
| CX7g049942 | 7:3,586,383-3,586,904 | + | - | C2H7g07514 | LOC_Os07g07670 | Os07g0173100 | - | Detail |
| CX7g047731 | 7:3,589,976-3,592,814 | - | C1H7g02387 | C2H7g04561 | LOC_Os07g07680 | Os07g0173200 | - | Detail |