| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g31584 | 9:14,397,174-14,398,148 | - | C2H9g05249 | CX9g055140 | LOC_Os09g28750 | Os09g0462200 | - | Detail |
| C1H9g31193 | 9:14,398,159-14,399,079 | - | C2H9g03017 | - | - | Os09g0462301 | - | Detail |
| C1H9g18452 | 9:14,402,609-14,405,130 | + | C2H9g27701 | CX9g057311 | LOC_Os09g28770 | Os09g0462400 | OsMATL2, OspPLAIIeta, OspPLA-IIalpha | Detail |
| C1H9g29610 | 9:14,407,442-14,407,735 | + | C2H9g19629 | CX9g056435 | LOC_Os09g28780 | Os08g0475500 | OsCEP6, OsCEP6.1 | Detail |
| C1H9g28013 | 9:14,417,767-14,421,876 | + | C2H9g05705 | CX9g055048 | LOC_Os09g28810 | Os09g0462700 | - | Detail |
| C1H9g15723 | 9:14,423,139-14,423,470 | + | C2H9g21321 | - | - | Os09g0462850 | - | Detail |
| C1H9g15089 | 9:14,425,555-14,428,291 | - | C2H9g19364 | CX9g057216 | LOC_Os09g28830 | Os09g0462875 | - | Detail |
| C1H9g24460 | 9:14,431,895-14,435,261 | - | C2H9g06754 | CX9g056317 | LOC_Os09g28840 | Os09g0463100 | - | Detail |
| C1H9g16758 | 9:14,443,505-14,446,049 | - | C2H9g26932 | - | - | - | - | Detail |
| C1H9g08405 | 9:14,445,917-14,450,400 | + | C2H9g17616 | CX9g055989 | LOC_Os09g28850 | Os09g0463300 | - | Detail |
| C1H9g27922 | 9:14,462,626-14,463,366 | + | C2H8g04634 | CX8g053678 | LOC_Os09g28880 | Os09g0463600 | - | Detail |
| C1H9g22383 | 9:14,469,635-14,470,756 | + | - | CX8g050532 | LOC_Os09g28890 | Os09g0463700 | - | Detail |
| C1H9g29908 | 9:14,477,978-14,478,205 | + | C2H9g06208 | CX9g058102 | LOC_Os09g28900 | Os09g0463900 | - | Detail |
| C1H9g13495 | 9:14,479,436-14,479,918 | + | C2H9g06208 | CX9g055813 | LOC_Os09g28900 | Os09g0410700 | - | Detail |
| C1H9g11908 | 9:14,481,560-14,486,123 | - | C2H9g27359 | CX9g057340 | LOC_Os09g28910 | Os09g0464000 | - | Detail |
| C1H9g03015 | 9:14,485,149-14,486,023 | + | - | - | - | Os09g0464066 | - | Detail |
| C1H9g26305 | 9:14,498,312-14,499,307 | - | C2H9g21979 | CX9g056952 | LOC_Os09g28930 | Os09g0464300 | - | Detail |
| C1H9g02656 | 9:14,510,601-14,518,761 | - | C2H9g10275 | CX9g056356 | LOC_Os09g28940 | Os09g0464400 | - | Detail |
| C1H9g11367 | 9:14,531,631-14,532,587 | - | C2H9g26296 | CX9g057742 | LOC_Os09g29050 | Os09g0465400 | - | Detail |
| C1H9g04483 | 9:14,534,358-14,537,056 | + | C2H9g25155 | CX9g057144 | LOC_Os09g29060 | Os09g0465500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g047636 | 7:3,473,440-3,473,799 | - | C1H7g25554 | - | - | Os07g0170049 | - | Detail |
| CX7g047710 | 7:3,474,405-3,477,977 | - | C1H7g14072 | C2H7g06992 | LOC_Os07g07470 | Os07g0170100 | - | Detail |
| CX7g050139 | 7:3,479,810-3,481,529 | + | C1H7g03028 | C2H7g22441 | LOC_Os07g07480 | Os07g0170200 | - | Detail |
| CX7g047632 | 7:3,482,338-3,486,469 | - | C1H7g23823 | C2H7g19147 | LOC_Os07g07490 | Os07g0170300 | YTH10 | Detail |
| CX7g048057 | 7:3,489,444-3,490,386 | - | C1H7g11614 | C2H7g13685 | LOC_Os07g07500 | Os07g0170500 | - | Detail |
| CX7g049444 | 7:3,497,399-3,498,621 | + | - | C2H7g11204 | LOC_Os07g04120 | Os07g0162450 | - | Detail |
| CX7g047542 | 7:3,497,410-3,497,679 | - | - | C2H3g26421 | - | - | - | Detail |
| CX7g049154 | 7:3,499,248-3,503,613 | + | C1H7g24798 | C2H7g26640 | LOC_Os07g07520 | Os07g0170800 | - | Detail |
| CX7g050412 | 7:3,509,549-3,513,408 | + | - | - | LOC_Os07g07530 | Os07g0170900 | - | Detail |
| CX7g046745 | 7:3,515,631-3,517,199 | + | C1H7g24634 | C2H7g19751 | LOC_Os07g07540 | Os07g0171100 | OsXb22a | Detail |
| CX7g048847 | 7:3,518,169-3,522,133 | - | C1H7g06195 | C2H7g02309 | LOC_Os07g07550 | Os07g0171200 | - | Detail |
| CX7g049998 | 7:3,528,467-3,533,683 | + | C1H7g31145 | C2H7g29706 | LOC_Os07g07560 | Os07g0171300 | - | Detail |
| CX7g047532 | 7:3,545,520-3,548,585 | + | C1H7g26306 | C2H7g14506 | LOC_Os07g07580 | Os07g0172200 | - | Detail |
| CX7g046091 | 7:3,556,039-3,558,669 | - | C1H7g14038 | C2H7g26589 | LOC_Os07g07610 | Os07g0172500 | - | Detail |
| CX7g047681 | 7:3,559,812-3,562,415 | - | C1H7g15384 | C2H7g16081 | LOC_Os07g07620 | Os07g0172600 | OsSLA4 | Detail |
| CX7g048440 | 7:3,564,392-3,565,406 | - | C1H7g23957 | C2H7g12745 | LOC_Os07g07630 | - | - | Detail |
| CX7g047050 | 7:3,574,188-3,576,269 | + | C1H7g10408 | C2H7g07270 | LOC_Os07g07646 | Os03g0795100 | - | Detail |
| CX7g046232 | 7:3,577,158-3,582,376 | + | C1H7g05797 | C2H7g02138 | LOC_Os07g07654 | Os07g0172900 | - | Detail |
| CX7g049942 | 7:3,586,383-3,586,904 | + | - | C2H7g07514 | LOC_Os07g07670 | Os07g0173100 | - | Detail |
| CX7g047731 | 7:3,589,976-3,592,814 | - | C1H7g02387 | C2H7g04561 | LOC_Os07g07680 | Os07g0173200 | - | Detail |