| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g13669 | 5:7,463,795-7,468,267 | - | C2H5g10863 | CX5g039794 | LOC_Os05g16230 | Os05g0251200 | - | Detail |
| C1H5g11478 | 5:7,471,901-7,473,157 | - | C2H5g12394 | CX5g039447 | LOC_Os05g16240 | Os05g0251200 | - | Detail |
| C1H5g13415 | 5:7,474,950-7,479,303 | + | C2H5g03213 | CX5g038303 | LOC_Os05g16250 | Os05g0251400 | OsBVF1, P31<sup>comet</sup> | Detail |
| C1H5g25482 | 5:7,481,388-7,484,201 | + | C2H5g18069 | CX5g038303 | - | Os05g0251500 | - | Detail |
| C1H5g22880 | 5:7,487,995-7,491,891 | + | C2H5g11253 | CX5g037603 | - | - | - | Detail |
| C1H5g03577 | 5:7,489,093-7,494,918 | - | C2H5g17103 | CX5g040268 | LOC_Os05g16280 | Os05g0251900 | - | Detail |
| C1H5g13508 | 5:7,497,940-7,502,969 | - | C2H5g24772 | CX5g041044 | LOC_Os05g16290 | Os05g0252000 | - | Detail |
| C1H5g26814 | 5:7,514,364-7,516,023 | - | C2H5g01822 | CX5g037929 | LOC_Os05g16300 | Os05g0252100 | - | Detail |
| C1H5g13165 | 5:7,560,818-7,561,289 | + | C2H5g15484 | CX5g039636 | LOC_Os05g16420 | Os05g0253200 | - | Detail |
| C1H5g26412 | 5:7,633,753-7,637,377 | + | C2H5g01726 | CX5g040627 | LOC_Os05g16630 | Os05g0255600 | - | Detail |
| C1H5g13724 | 5:7,640,895-7,645,875 | + | C2H5g24880 | CX5g040616 | LOC_Os05g16640 | Os05g0255800 | - | Detail |
| C1H5g15674 | 5:7,650,875-7,656,493 | + | C2H5g00655 | CX5g039252 | LOC_Os05g16660 | Os05g0256000 | - | Detail |
| C1H5g11784 | 5:7,669,303-7,680,295 | + | C2H5g00991 | CX5g038401 | LOC_Os05g16430 | Os05g0256100 | - | Detail |
| C1H5g15820 | 5:7,730,571-7,741,013 | + | C2H5g02628 | CX5g040531 | LOC_Os05g16430 | Os05g0256500 | - | Detail |
| C1H5g24182 | 5:7,766,659-7,776,349 | + | C2H5g15704 | CX5g039056 | LOC_Os05g16430 | Os05g0257100 | - | Detail |
| C1H5g28432 | 5:7,780,957-7,781,515 | + | C2H5g05784 | CX3g030223 | - | - | - | Detail |
| C1H5g26063 | 5:7,817,075-7,823,465 | + | C2H5g12556 | CX5g036934 | LOC_Os05g16420 | Os05g0253200 | - | Detail |
| C1H5g03004 | 5:7,845,727-7,846,645 | + | C2H5g12556 | CX5g038401 | - | Os05g0261700 | - | Detail |
| C1H5g04336 | 5:7,847,001-7,848,449 | + | C2H5g07983 | CX5g036934 | LOC_Os05g16670 | Os05g0263100 | - | Detail |
| C1H5g16401 | 5:7,855,230-7,860,196 | + | C2H5g15568 | CX5g038074 | LOC_Os05g16740 | Os05g0263100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g047896 | 7:3,362,976-3,363,143 | - | - | - | - | Os07g0616100 | - | Detail |
| CX7g050299 | 7:3,366,617-3,370,335 | + | C1H7g22643 | C2H7g21113 | LOC_Os07g07230 | Os07g0166700 | - | Detail |
| CX7g046894 | 7:3,371,976-3,376,024 | - | C1H7g20925 | C2H7g24489 | LOC_Os07g07240 | Os07g0166800 | - | Detail |
| CX7g046720 | 7:3,378,238-3,381,648 | + | C1H7g28784 | C2H7g08428 | LOC_Os07g07250 | Os07g0167000 | - | Detail |
| CX7g047112 | 7:3,383,547-3,392,890 | + | C1H7g30457 | C2H7g21719 | LOC_Os07g07260 | Os07g0167100 | - | Detail |
| CX7g050218 | 7:3,393,519-3,396,685 | - | C1H7g24882 | C2H7g21242 | LOC_Os07g07270 | Os07g0167200 | - | Detail |
| CX7g046909 | 7:3,398,662-3,399,703 | + | C1H7g19293 | C2H7g17486 | LOC_Os07g07280 | Os07g0167300 | - | Detail |
| CX7g046021 | 7:3,400,556-3,400,993 | - | - | C2H7g01212 | LOC_Os07g07290 | - | - | Detail |
| CX7g046534 | 7:3,416,026-3,426,525 | - | C1H7g09549 | C2H7g26058 | LOC_Os07g07310 | Os07g0168000 | - | Detail |
| CX7g050336 | 7:3,432,336-3,433,046 | + | C1H7g21910 | C2H7g05911 | LOC_Os07g07320 | Os07g0168300 | - | Detail |
| CX7g046492 | 7:3,437,778-3,437,948 | + | - | - | - | - | - | Detail |
| CX7g050193 | 7:3,439,971-3,442,624 | + | C1H7g13022 | C2H7g07731 | LOC_Os07g07340 | Os07g0168600 | - | Detail |
| CX7g047497 | 7:3,446,199-3,446,381 | + | - | - | - | - | - | Detail |
| CX7g046780 | 7:3,447,056-3,447,541 | - | C1H7g31137 | C2H7g07319 | LOC_Os07g07350 | Os07g0168800 | ZFP177 | Detail |
| CX7g047999 | 7:3,453,869-3,454,351 | - | C1H7g17268 | C2H7g20995 | LOC_Os07g07400 | Os07g0169500 | - | Detail |
| CX7g046317 | 7:3,458,112-3,459,743 | + | C1H7g28232 | C2H7g14770 | LOC_Os07g07410 | Os07g0169600 | - | Detail |
| CX7g046653 | 7:3,460,757-3,463,309 | + | C1H7g27542 | C2H7g13120 | LOC_Os07g07420 | Os07g0169700 | GA20OX3, OsGA20ox3, ga20ox3 | Detail |
| CX7g048611 | 7:3,465,298-3,466,386 | - | C1H7g28416 | C2H7g17670 | LOC_Os07g07430 | Os07g0169800 | - | Detail |
| CX7g048338 | 7:3,469,073-3,469,858 | + | C1H7g01686 | C2H7g21046 | LOC_Os07g07440 | Os07g0170000 | - | Detail |
| CX7g049509 | 7:3,470,200-3,470,988 | - | C1H7g19349 | C2H7g13629 | LOC_Os07g07450 | Os07g0561500 | - | Detail |