| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g10609 | 3:13,084,893-13,085,765 | - | C2H3g00617 | CX3g030534 | LOC_Os03g25550 | Os03g0371800 | - | Detail |
| C1H3g16595 | 3:13,085,830-13,086,327 | - | C2H3g00617 | CX3g030534 | LOC_Os03g25550 | Os03g0371800 | - | Detail |
| C1H3g09237 | 3:13,125,177-13,133,800 | + | C2H3g13066 | CX3g030141 | LOC_Os03g25600 | Os03g0821300 | - | Detail |
| C1H3g20988 | 3:13,136,297-13,136,900 | - | C2H3g24461 | CX3g030815 | LOC_Os03g25610 | Os03g0372600 | - | Detail |
| C1H3g26671 | 3:13,139,232-13,142,571 | + | C2H3g09558 | CX3g025086 | LOC_Os03g25620 | Os03g0372700 | - | Detail |
| C1H3g02459 | 3:13,166,542-13,170,433 | - | C2H3g30423 | CX3g029031 | LOC_Os03g25720 | Os03g0374100 | - | Detail |
| C1H3g03430 | 3:13,174,979-13,178,588 | + | C2H3g09363 | CX3g025872 | LOC_Os03g25750 | Os03g0374400 | - | Detail |
| C1H3g29992 | 3:13,180,001-13,182,532 | - | C2H3g02420 | CX3g031135 | LOC_Os03g25760 | Os03g0374500 | OsIQM3 | Detail |
| C1H3g04281 | 3:13,193,090-13,195,387 | - | C2H3g06785 | CX3g028239 | LOC_Os03g25770 | Os03g0374575 | OsSCL26 | Detail |
| C1H3g12991 | 3:13,200,156-13,205,327 | + | C2H3g13807 | CX3g025908 | LOC_Os03g25790 | Os03g0374600 | - | Detail |
| C1H3g11329 | 3:13,211,637-13,212,344 | - | C2H3g07823 | CX3g031122 | LOC_Os03g25820 | Os03g0375900 | - | Detail |
| C1H3g18047 | 3:13,225,800-13,226,291 | - | C2H3g13273 | CX3g031122 | LOC_Os03g25820 | Os03g0375900 | - | Detail |
| C1H3g22864 | 3:13,232,497-13,233,498 | - | C2H3g09283 | CX3g031122 | LOC_Os03g25869 | Os03g0375300 | - | Detail |
| C1H3g05274 | 3:13,243,391-13,246,165 | - | C2H3g17665 | CX3g025557 | LOC_Os03g25920 | Os03g0375966 | - | Detail |
| C1H3g13157 | 3:13,251,260-13,254,412 | - | C2H3g22221 | CX3g028356 | LOC_Os03g25930 | Os03g0376000 | - | Detail |
| C1H3g30616 | 3:13,257,477-13,261,052 | - | C2H3g00210 | CX3g030420 | LOC_Os03g25940 | Os03g0376100 | - | Detail |
| C1H3g18959 | 3:13,268,397-13,270,478 | - | C2H3g30664 | CX3g029886 | LOC_Os03g25960 | Os03g0376600 | OsRRM2 | Detail |
| C1H3g09004 | 3:13,278,445-13,282,986 | - | C2H3g23850 | CX3g027038 | LOC_Os03g25970 | Os03g0376800 | - | Detail |
| C1H3g26655 | 3:13,284,368-13,289,138 | + | C2H3g09355 | CX3g029788 | LOC_Os03g25980 | Os03g0376900 | - | Detail |
| C1H3g07493 | 3:13,299,871-13,300,470 | + | C2H3g25053 | CX3g029933 | LOC_Os03g25990 | Os03g0377100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g047896 | 7:3,362,976-3,363,143 | - | - | - | - | Os07g0616100 | - | Detail |
| CX7g050299 | 7:3,366,617-3,370,335 | + | C1H7g22643 | C2H7g21113 | LOC_Os07g07230 | Os07g0166700 | - | Detail |
| CX7g046894 | 7:3,371,976-3,376,024 | - | C1H7g20925 | C2H7g24489 | LOC_Os07g07240 | Os07g0166800 | - | Detail |
| CX7g046720 | 7:3,378,238-3,381,648 | + | C1H7g28784 | C2H7g08428 | LOC_Os07g07250 | Os07g0167000 | - | Detail |
| CX7g047112 | 7:3,383,547-3,392,890 | + | C1H7g30457 | C2H7g21719 | LOC_Os07g07260 | Os07g0167100 | - | Detail |
| CX7g050218 | 7:3,393,519-3,396,685 | - | C1H7g24882 | C2H7g21242 | LOC_Os07g07270 | Os07g0167200 | - | Detail |
| CX7g046909 | 7:3,398,662-3,399,703 | + | C1H7g19293 | C2H7g17486 | LOC_Os07g07280 | Os07g0167300 | - | Detail |
| CX7g046021 | 7:3,400,556-3,400,993 | - | - | C2H7g01212 | LOC_Os07g07290 | - | - | Detail |
| CX7g046534 | 7:3,416,026-3,426,525 | - | C1H7g09549 | C2H7g26058 | LOC_Os07g07310 | Os07g0168000 | - | Detail |
| CX7g050336 | 7:3,432,336-3,433,046 | + | C1H7g21910 | C2H7g05911 | LOC_Os07g07320 | Os07g0168300 | - | Detail |
| CX7g046492 | 7:3,437,778-3,437,948 | + | - | - | - | - | - | Detail |
| CX7g050193 | 7:3,439,971-3,442,624 | + | C1H7g13022 | C2H7g07731 | LOC_Os07g07340 | Os07g0168600 | - | Detail |
| CX7g047497 | 7:3,446,199-3,446,381 | + | - | - | - | - | - | Detail |
| CX7g046780 | 7:3,447,056-3,447,541 | - | C1H7g31137 | C2H7g07319 | LOC_Os07g07350 | Os07g0168800 | ZFP177 | Detail |
| CX7g047999 | 7:3,453,869-3,454,351 | - | C1H7g17268 | C2H7g20995 | LOC_Os07g07400 | Os07g0169500 | - | Detail |
| CX7g046317 | 7:3,458,112-3,459,743 | + | C1H7g28232 | C2H7g14770 | LOC_Os07g07410 | Os07g0169600 | - | Detail |
| CX7g046653 | 7:3,460,757-3,463,309 | + | C1H7g27542 | C2H7g13120 | LOC_Os07g07420 | Os07g0169700 | GA20OX3, OsGA20ox3, ga20ox3 | Detail |
| CX7g048611 | 7:3,465,298-3,466,386 | - | C1H7g28416 | C2H7g17670 | LOC_Os07g07430 | Os07g0169800 | - | Detail |
| CX7g048338 | 7:3,469,073-3,469,858 | + | C1H7g01686 | C2H7g21046 | LOC_Os07g07440 | Os07g0170000 | - | Detail |
| CX7g049509 | 7:3,470,200-3,470,988 | - | C1H7g19349 | C2H7g13629 | LOC_Os07g07450 | Os07g0561500 | - | Detail |