| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g01132 | 4:25,650,192-25,650,440 | + | C1H4g03657 | CX4g035450 | LOC_Os04g49954 | Os04g0589500 | - | Detail |
| C2H4g25942 | 4:25,651,004-25,653,966 | + | C1H4g04000 | CX4g036452 | LOC_Os04g49960 | Os04g0589600 | - | Detail |
| C2H4g07828 | 4:25,657,268-25,658,527 | + | C1H4g01937 | CX4g033285 | LOC_Os04g49970 | Os04g0589700 | - | Detail |
| C2H4g04763 | 4:25,659,868-25,660,245 | + | - | CX4g031536 | LOC_Os04g49980 | Os04g0589800 | - | Detail |
| C2H4g14617 | 4:25,662,162-25,666,185 | - | C1H4g23513 | CX4g033266 | LOC_Os04g49990 | Os04g0589900 | - | Detail |
| C2H4g17217 | 4:25,668,613-25,669,823 | + | C1H4g02193 | CX4g035591 | LOC_Os04g50020 | Os04g0590100 | - | Detail |
| C2H4g06669 | 4:25,672,460-25,673,377 | - | C1H4g12302 | CX4g036439 | LOC_Os04g50030 | Os04g0590200 | OsAHL9 | Detail |
| C2H4g09729 | 4:25,688,971-25,690,329 | - | C1H4g13780 | - | - | - | - | Detail |
| C2H4g13547 | 4:25,692,693-25,695,012 | + | C1H4g18122 | CX4g033121 | LOC_Os04g50060 | Os04g0590400 | OsGRAS23, GRAS23 | Detail |
| C2H4g26547 | 4:25,710,259-25,714,577 | + | C1H4g31900 | CX4g035797 | LOC_Os04g50090 | Os04g0590800 | - | Detail |
| C2H4g13442 | 4:25,717,262-25,718,413 | - | C1H4g23703 | CX4g032886 | LOC_Os04g50100 | Os04g0590900 | - | Detail |
| C2H4g02078 | 4:25,721,680-25,724,817 | - | C1H4g21960 | CX4g033322 | LOC_Os04g50110 | Os04g0591000 | - | Detail |
| C2H4g13975 | 4:25,734,463-25,735,787 | - | C1H4g24153 | CX4g034842 | LOC_Os04g50120 | Os04g0591100 | - | Detail |
| C2H4g25291 | 4:25,744,754-25,745,293 | + | - | CX4g032856 | LOC_Os04g50176 | Os04g0591300 | - | Detail |
| C2H4g07571 | 4:25,758,251-25,759,780 | - | C1H4g23201 | CX4g034407 | LOC_Os04g50200 | Os04g0591900 | - | Detail |
| C2H4g02751 | 4:25,765,114-25,768,209 | + | C1H4g20135 | CX4g033568 | LOC_Os04g50204 | Os04g0592400 | - | Detail |
| C2H4g26050 | 4:25,769,660-25,773,036 | - | C1H4g07229 | CX4g034823 | LOC_Os04g50208 | Os04g0592500 | - | Detail |
| C2H4g14985 | 4:25,773,909-25,776,482 | - | C1H4g17911 | CX4g036584 | LOC_Os04g50216 | Os04g0592600 | - | Detail |
| C2H4g11940 | 4:25,780,460-25,786,739 | - | C1H4g26639 | CX4g032082 | LOC_Os04g50660 | Os04g0592700 | - | Detail |
| C2H4g11781 | 4:25,790,673-25,791,994 | - | C1H4g07059 | CX4g035171 | LOC_Os04g50680 | Os04g0593200 | Os2R_MYB50 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g050378 | 7:2,997,853-2,998,047 | - | - | - | - | - | - | Detail |
| CX7g049818 | 7:2,999,088-3,000,433 | + | C1H7g10977 | C2H7g04792 | LOC_Os07g06670 | Os07g0160500 | - | Detail |
| CX7g046783 | 7:3,003,722-3,005,089 | + | C1H7g30967 | C2H7g20200 | LOC_Os07g06680 | Os07g0160600 | - | Detail |
| CX7g047372 | 7:3,019,623-3,024,696 | - | C1H7g30885 | C2H7g10241 | LOC_Os07g06710 | Os07g0161000 | - | Detail |
| CX7g049860 | 7:3,031,966-3,035,097 | - | C1H7g06448 | C2H7g04340 | LOC_Os07g06740 | Os07g0161600 | CDPK17, OsCPK17 | Detail |
| CX7g048179 | 7:3,038,209-3,038,736 | + | - | C2H7g01138 | LOC_Os07g06750 | Os07g0161700 | - | Detail |
| CX7g049174 | 7:3,046,698-3,047,273 | + | - | C2H7g01138 | LOC_Os07g06790 | Os07g0161700 | - | Detail |
| CX7g048571 | 7:3,052,838-3,054,590 | - | C1H7g15459 | C2H7g11082 | LOC_Os07g06800 | Os07g0162100 | - | Detail |
| CX7g049835 | 7:3,056,829-3,057,683 | - | - | C2H7g29889 | LOC_Os07g06810 | Os07g0162200 | - | Detail |
| CX7g049055 | 7:3,058,787-3,063,591 | + | C1H7g24248 | C2H7g01313 | LOC_Os07g06820 | Os07g0162300 | - | Detail |
| CX7g047650 | 7:3,085,965-3,087,011 | - | C1H7g03092 | C2H7g23395 | LOC_Os07g06860 | Os07g0162700 | - | Detail |
| CX7g048930 | 7:3,103,372-3,104,364 | - | C1H7g03092 | C2H7g13583 | LOC_Os07g06880 | Os07g0162900 | - | Detail |
| CX7g049022 | 7:3,106,410-3,113,185 | - | C1H7g06281 | C2H7g15677 | LOC_Os07g06890 | Os07g0163000 | OsD-LDH, D-LDH, OsD-LDH-Tr | Detail |
| CX7g046953 | 7:3,116,058-3,118,366 | - | C1H7g03136 | C2H7g11414 | LOC_Os07g06900 | Os07g0163200 | - | Detail |
| CX7g050145 | 7:3,121,093-3,122,471 | - | C1H7g06104 | C2H7g28250 | LOC_Os07g06910 | - | - | Detail |
| CX7g047813 | 7:3,135,503-3,147,330 | + | C1H7g10635 | C2H7g28897 | LOC_Os07g06940 | Os07g0163500 | WP1, OsValRS2, ValRS2 | Detail |
| CX7g047695 | 7:3,155,733-3,166,797 | + | C1H7g30562 | C2H7g16342 | LOC_Os07g06950 | Os07g0163800 | - | Detail |
| CX7g047617 | 7:3,169,373-3,171,325 | - | C1H7g30359 | C2H7g11193 | LOC_Os07g06960 | Os07g0163900 | - | Detail |
| CX7g046501 | 7:3,172,230-3,177,102 | - | C1H7g13389 | C2H7g12803 | LOC_Os07g06970 | Os07g0164000 | WAF1, waf1, waf1-1, waf1-2, HEN1 | Detail |
| CX7g046855 | 7:3,179,011-3,187,717 | - | C1H7g24937 | C2H7g02116 | LOC_Os07g06980 | Os07g0164100 | HDA704 | Detail |