| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g07925 | 9:4,475,655-4,488,861 | + | C2H9g26673 | CX9g056375 | LOC_Os09g09360 | Os09g0266400 | - | Detail |
| C1H9g19274 | 9:4,489,796-4,501,100 | - | C2H9g20971 | CX9g056600 | LOC_Os09g09370 | Os09g0266600 | - | Detail |
| C1H9g06763 | 9:4,540,131-4,547,720 | + | C2H9g28492 | CX9g055629 | LOC_Os09g09470 | Os09g0267500 | - | Detail |
| C1H9g16484 | 9:4,550,592-4,554,331 | + | C2H9g02970 | CX9g056945 | LOC_Os09g09480 | Os09g0267600 | - | Detail |
| C1H9g25249 | 9:4,641,218-4,644,708 | + | C2H9g18374 | - | - | - | - | Detail |
| C1H9g14847 | 9:4,686,001-4,688,229 | - | C2H9g21323 | CX9g056003 | LOC_Os09g09790 | Os09g0270900 | - | Detail |
| C1H9g28290 | 9:4,730,552-4,731,272 | - | C2H9g23545 | CX9g055328 | LOC_Os09g09830 | Os09g0271100 | OsHIPP21 | Detail |
| C1H9g21029 | 9:4,754,130-4,754,756 | - | C2H9g20381 | CX9g056914 | LOC_Os09g09850 | Os09g0271100 | OsHIPP21 | Detail |
| C1H9g26618 | 9:4,772,143-4,774,716 | - | C2H9g30468 | CX9g056996 | LOC_Os09g17930 | - | - | Detail |
| C1H9g25101 | 9:4,792,216-4,793,010 | - | C2H9g04956 | CX9g055564 | LOC_Os09g09930 | Os09g0272000 | OsHIPP17 | Detail |
| C1H9g04150 | 9:4,799,519-4,799,792 | - | - | - | - | - | - | Detail |
| C1H9g30109 | 9:4,800,817-4,801,381 | - | C2H9g29443 | - | - | - | - | Detail |
| C1H9g18393 | 9:4,816,449-4,818,962 | + | C2H9g08811 | CX9g057268 | LOC_Os09g09980 | Os09g0272300 | - | Detail |
| C1H9g26091 | 9:4,819,505-4,819,867 | - | C2H9g06730 | CX9g055161 | - | Os09g0272401 | - | Detail |
| C1H9g17105 | 9:4,823,136-4,826,779 | - | C2H9g24324 | CX9g055756 | LOC_Os09g10000 | Os09g0272500 | - | Detail |
| C1H9g19656 | 9:4,831,247-4,831,822 | + | C2H9g05170 | CX9g057482 | LOC_Os09g10010 | Os09g0272600 | - | Detail |
| C1H9g02886 | 9:4,850,975-4,852,021 | - | - | - | - | - | - | Detail |
| C1H9g21803 | 9:4,883,721-4,884,209 | - | C2H9g21933 | CX9g057777 | LOC_Os09g10200 | Os09g0273800 | - | Detail |
| C1H9g13280 | 9:4,915,697-4,916,185 | - | C2H9g21933 | CX9g057777 | LOC_Os09g10200 | Os09g0273800 | - | Detail |
| C1H9g25335 | 9:4,942,549-4,943,037 | - | C2H9g21933 | CX9g057777 | LOC_Os09g10200 | Os09g0273800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g050378 | 7:2,997,853-2,998,047 | - | - | - | - | - | - | Detail |
| CX7g049818 | 7:2,999,088-3,000,433 | + | C1H7g10977 | C2H7g04792 | LOC_Os07g06670 | Os07g0160500 | - | Detail |
| CX7g046783 | 7:3,003,722-3,005,089 | + | C1H7g30967 | C2H7g20200 | LOC_Os07g06680 | Os07g0160600 | - | Detail |
| CX7g047372 | 7:3,019,623-3,024,696 | - | C1H7g30885 | C2H7g10241 | LOC_Os07g06710 | Os07g0161000 | - | Detail |
| CX7g049860 | 7:3,031,966-3,035,097 | - | C1H7g06448 | C2H7g04340 | LOC_Os07g06740 | Os07g0161600 | CDPK17, OsCPK17 | Detail |
| CX7g048179 | 7:3,038,209-3,038,736 | + | - | C2H7g01138 | LOC_Os07g06750 | Os07g0161700 | - | Detail |
| CX7g049174 | 7:3,046,698-3,047,273 | + | - | C2H7g01138 | LOC_Os07g06790 | Os07g0161700 | - | Detail |
| CX7g048571 | 7:3,052,838-3,054,590 | - | C1H7g15459 | C2H7g11082 | LOC_Os07g06800 | Os07g0162100 | - | Detail |
| CX7g049835 | 7:3,056,829-3,057,683 | - | - | C2H7g29889 | LOC_Os07g06810 | Os07g0162200 | - | Detail |
| CX7g049055 | 7:3,058,787-3,063,591 | + | C1H7g24248 | C2H7g01313 | LOC_Os07g06820 | Os07g0162300 | - | Detail |
| CX7g047650 | 7:3,085,965-3,087,011 | - | C1H7g03092 | C2H7g23395 | LOC_Os07g06860 | Os07g0162700 | - | Detail |
| CX7g048930 | 7:3,103,372-3,104,364 | - | C1H7g03092 | C2H7g13583 | LOC_Os07g06880 | Os07g0162900 | - | Detail |
| CX7g049022 | 7:3,106,410-3,113,185 | - | C1H7g06281 | C2H7g15677 | LOC_Os07g06890 | Os07g0163000 | OsD-LDH, D-LDH, OsD-LDH-Tr | Detail |
| CX7g046953 | 7:3,116,058-3,118,366 | - | C1H7g03136 | C2H7g11414 | LOC_Os07g06900 | Os07g0163200 | - | Detail |
| CX7g050145 | 7:3,121,093-3,122,471 | - | C1H7g06104 | C2H7g28250 | LOC_Os07g06910 | - | - | Detail |
| CX7g047813 | 7:3,135,503-3,147,330 | + | C1H7g10635 | C2H7g28897 | LOC_Os07g06940 | Os07g0163500 | WP1, OsValRS2, ValRS2 | Detail |
| CX7g047695 | 7:3,155,733-3,166,797 | + | C1H7g30562 | C2H7g16342 | LOC_Os07g06950 | Os07g0163800 | - | Detail |
| CX7g047617 | 7:3,169,373-3,171,325 | - | C1H7g30359 | C2H7g11193 | LOC_Os07g06960 | Os07g0163900 | - | Detail |
| CX7g046501 | 7:3,172,230-3,177,102 | - | C1H7g13389 | C2H7g12803 | LOC_Os07g06970 | Os07g0164000 | WAF1, waf1, waf1-1, waf1-2, HEN1 | Detail |
| CX7g046855 | 7:3,179,011-3,187,717 | - | C1H7g24937 | C2H7g02116 | LOC_Os07g06980 | Os07g0164100 | HDA704 | Detail |