| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g09842 | 4:19,965,873-19,967,760 | + | C2H4g10950 | CX4g031630 | LOC_Os04g38600 | Os04g0459500 | - | Detail |
| C1H4g22419 | 4:19,968,451-19,970,778 | - | C2H4g21093 | CX4g035534 | LOC_Os04g38610 | Os04g0459600 | - | Detail |
| C1H4g02624 | 4:19,972,528-19,975,843 | - | C2H4g29769 | CX4g031435 | LOC_Os04g38620 | Os04g0459700 | - | Detail |
| C1H4g06613 | 4:19,981,869-19,985,349 | - | C2H4g23801 | CX4g032546 | LOC_Os04g38630 | Os04g0459800 | - | Detail |
| C1H4g08376 | 4:19,988,929-19,994,340 | + | C2H4g04441 | CX4g034165 | LOC_Os04g38640 | Os04g0459900 | - | Detail |
| C1H4g19139 | 4:20,001,646-20,003,575 | + | C2H4g25768 | CX4g035386 | LOC_Os04g38670 | Os04g0460200 | OsATL14, Bh4 | Detail |
| C1H4g00598 | 4:20,019,678-20,021,871 | + | C2H4g01029 | CX4g036106 | LOC_Os04g38680 | Os04g0460300 | - | Detail |
| C1H4g20972 | 4:20,026,350-20,027,141 | + | C2H4g15731 | CX4g033651 | LOC_Os04g38690 | Os04g0460400 | CASP5, OsCASP5 | Detail |
| C1H4g26714 | 4:20,029,626-20,032,112 | + | C2H4g29420 | CX4g035215 | LOC_Os04g38700 | Os04g0460500 | - | Detail |
| C1H4g00856 | 4:20,038,253-20,039,873 | + | C2H4g09182 | CX4g035794 | LOC_Os04g38720 | Os04g0460600 | NAC2, OsNAC2, ONAC004, ONAC4, ONAC034, ONAC34, ONAC058, ONAC58, OMTN2, Ostil1, OsNAC2/ONAC004, OsORE1.2 | Detail |
| C1H4g10275 | 4:20,046,098-20,049,027 | - | C2H4g21139 | CX4g031747 | LOC_Os04g38730 | - | - | Detail |
| C1H4g16192 | 4:20,070,094-20,073,348 | + | C2H4g04335 | CX4g033056 | LOC_Os04g38740 | Os04g0461000 | Os2R_MYB43 | Detail |
| C1H4g01178 | 4:20,073,898-20,075,514 | + | C2H4g17531 | CX4g035604 | LOC_Os04g38750 | Os04g0461100 | - | Detail |
| C1H4g10260 | 4:20,086,206-20,094,834 | + | C2H4g02198 | CX4g035338 | LOC_Os04g38770 | Os04g0461300 | - | Detail |
| C1H4g16630 | 4:20,087,292-20,103,395 | - | C2H4g30121 | - | - | - | - | Detail |
| C1H4g09833 | 4:20,107,659-20,108,803 | - | C2H4g15152 | CX4g032154 | - | Os04g0461600 | - | Detail |
| C1H4g11139 | 4:20,114,503-20,117,717 | - | C2H4g04073 | CX4g033096 | LOC_Os04g38810 | Os04g0461800 | - | Detail |
| C1H4g20046 | 4:20,119,778-20,126,787 | - | C2H4g14143 | CX4g035671 | LOC_Os04g38850 | Os04g0462300 | - | Detail |
| C1H4g28167 | 4:20,124,184-20,124,561 | + | C2H4g25655 | CX4g034495 | LOC_Os04g38840 | Os04g0462200 | - | Detail |
| C1H4g07343 | 4:20,127,971-20,130,002 | - | C2H4g21045 | CX4g031760 | LOC_Os04g38860 | Os04g0462400 | OsLHT4 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g046636 | 7:2,559,974-2,561,057 | + | C1H7g21910 | C2H7g26144 | LOC_Os07g05800 | Os07g0152700 | - | Detail |
| CX7g049940 | 7:2,563,319-2,564,805 | + | - | - | LOC_Os07g05810 | Os07g0152800 | - | Detail |
| CX7g046057 | 7:2,566,311-2,569,027 | + | C1H7g31721 | C2H7g03553 | LOC_Os07g05820 | Os07g0152900 | - | Detail |
| CX7g047492 | 7:2,569,682-2,571,796 | - | C1H7g16794 | C2H7g02960 | LOC_Os07g05830 | Os07g0153000 | OsJAZ2, OsTIFY5 | Detail |
| CX7g047880 | 7:2,577,500-2,581,037 | - | C1H7g10082 | C2H7g17210 | LOC_Os07g05870 | Os07g0153300 | - | Detail |
| CX7g049166 | 7:2,582,683-2,584,850 | - | C1H7g03664 | C2H7g13226 | LOC_Os07g05880 | Os07g0153400 | - | Detail |
| CX7g046607 | 7:2,731,605-2,731,775 | - | - | - | - | Os07g0616100 | - | Detail |
| CX7g049287 | 7:2,733,590-2,735,365 | + | - | C2H7g12672 | LOC_Os07g05940 | Os07g0154100 | OsNCED4 | Detail |
| CX7g047873 | 7:2,745,265-2,745,489 | + | - | C2H7g02756 | LOC_Os07g05950 | Os07g0154300 | - | Detail |
| CX7g047139 | 7:2,745,946-2,758,377 | - | C1H7g22209 | C2H7g00344 | LOC_Os07g05960 | Os07g0154400 | - | Detail |
| CX7g048333 | 7:2,764,141-2,764,666 | - | - | C2H7g11783 | - | - | - | Detail |
| CX7g049052 | 7:2,769,155-2,769,472 | - | - | C2H7g27748 | - | - | - | Detail |
| CX7g049975 | 7:2,770,146-2,773,324 | - | C1H7g06221 | C2H7g10712 | LOC_Os07g06060 | Os07g0154800 | - | Detail |
| CX7g046175 | 7:2,773,936-2,775,242 | + | C1H7g06093 | C2H7g27762 | LOC_Os07g06080 | Os07g0155100 | - | Detail |
| CX7g049141 | 7:2,775,778-2,778,616 | - | C1H7g27216 | C2H7g04281 | LOC_Os07g06090 | Os07g0155200 | - | Detail |
| CX7g049496 | 7:2,780,836-2,781,000 | + | - | - | - | Os09g0414600 | - | Detail |
| CX7g049650 | 7:2,808,861-2,809,013 | - | - | - | - | Os07g0616100 | - | Detail |
| CX7g048977 | 7:2,814,338-2,820,060 | + | C1H7g27246 | C2H7g16139 | LOC_Os07g06130 | Os07g0155600 | EIN2, OsEIN2 | Detail |
| CX7g047165 | 7:2,822,286-2,823,042 | + | C1H7g16025 | C2H7g21210 | LOC_Os07g06380 | Os07g0156910 | - | Detail |
| CX7g049954 | 7:2,850,099-2,852,825 | + | C1H7g16025 | C2H7g21210 | LOC_Os07g06175 | Os07g0156910 | - | Detail |