| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g27679 | 5:21,446,809-21,448,424 | + | C1H5g21636 | CX5g038171 | LOC_Os05g43930 | Os05g0515500 | OsASMT3 | Detail |
| C2H5g07980 | 5:21,459,705-21,461,313 | - | C1H5g21636 | CX5g038512 | LOC_Os05g43940 | Os05g0515600 | OsCOMT9 | Detail |
| C2H5g04015 | 5:21,465,959-21,469,788 | + | C1H5g00839 | CX5g037498 | LOC_Os05g43950 | Os05g0515700 | OsVOZ2 | Detail |
| C2H5g16276 | 5:21,470,543-21,472,216 | - | C1H5g13776 | CX5g039793 | LOC_Os05g43960 | Os05g0415400 | OsNAC24 | Detail |
| C2H5g17758 | 5:21,472,580-21,476,442 | + | C1H5g03749 | CX5g038707 | LOC_Os05g43970 | Os05g0515900 | - | Detail |
| C2H5g19371 | 5:21,479,854-21,480,213 | - | C1H5g20589 | CX5g039772 | LOC_Os01g54800 | Os05g0516100 | - | Detail |
| C2H5g04233 | 5:21,484,053-21,486,164 | + | C1H5g26916 | CX5g039979 | LOC_Os05g44020 | Os05g0516300 | - | Detail |
| C2H5g24477 | 5:21,488,412-21,490,154 | + | - | - | - | - | - | Detail |
| C2H5g15773 | 5:21,488,859-21,489,953 | - | C1H5g24467 | CX5g039876 | - | Os05g0516475 | - | Detail |
| C2H5g13797 | 5:21,491,603-21,493,790 | + | C1H5g19283 | CX5g038417 | LOC_Os05g44030 | Os05g0516400 | - | Detail |
| C2H5g04641 | 5:21,495,897-21,498,588 | + | C1H5g14981 | CX5g039493 | LOC_Os05g44050 | Os05g0516600 | OsRab7, OsRab7B3 | Detail |
| C2H5g05743 | 5:21,499,514-21,500,047 | + | C1H5g10610 | CX5g041146 | LOC_Os05g44060 | Os05g0516700 | - | Detail |
| C2H5g24588 | 5:21,500,787-21,502,519 | - | C1H5g21266 | CX5g039048 | LOC_Os05g44070 | Os05g0516800 | - | Detail |
| C2H5g20039 | 5:21,504,562-21,510,450 | + | C1H5g05035 | CX5g039615 | LOC_Os05g44080 | Os05g0516900 | OsMac3 | Detail |
| C2H5g04869 | 5:21,511,527-21,512,471 | - | C1H5g21400 | CX5g038718 | LOC_Os05g44090 | Os05g0517100 | - | Detail |
| C2H5g18358 | 5:21,517,765-21,522,525 | + | C1H5g00428 | CX5g040204 | LOC_Os05g44100 | Os05g0517200 | - | Detail |
| C2H5g21345 | 5:21,525,685-21,526,736 | + | C1H5g00439 | CX5g037887 | LOC_Os05g44120 | Os05g0517400 | - | Detail |
| C2H5g27310 | 5:21,528,516-21,532,703 | - | C1H5g15240 | CX5g040072 | LOC_Os05g44130 | Os05g0517500 | - | Detail |
| C2H5g03251 | 5:21,533,871-21,537,153 | - | C1H5g27527 | CX5g039695 | LOC_Os05g44140 | Os05g0517600 | Hb5 | Detail |
| C2H5g27370 | 5:21,538,256-21,540,460 | + | C1H5g21769 | CX5g040040 | LOC_Os05g44160 | Os05g0517800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g047448 | 7:2,351,822-2,353,600 | - | C1H7g28014 | C2H7g05371 | LOC_Os07g05560 | Os07g0150000 | - | Detail |
| CX7g046128 | 7:2,354,295-2,358,931 | - | C1H7g24736 | C2H7g11076 | LOC_Os07g05570 | Os07g0150100 | - | Detail |
| CX7g046928 | 7:2,359,906-2,360,070 | - | - | - | - | Os07g0596950 | - | Detail |
| CX7g049041 | 7:2,365,079-2,367,041 | + | C1H7g04309 | C2H7g01613 | LOC_Os07g05580 | Os07g0150200 | - | Detail |
| CX7g048722 | 7:2,374,371-2,374,604 | - | - | - | - | - | - | Detail |
| CX7g049185 | 7:2,387,784-2,388,233 | + | - | C2H7g28166 | - | - | - | Detail |
| CX7g048419 | 7:2,394,886-2,400,706 | - | C1H7g20992 | C2H7g23215 | LOC_Os07g05610 | Os07g0150500 | - | Detail |
| CX7g046244 | 7:2,402,141-2,402,623 | + | C1H4g05987 | C2H7g26391 | - | - | - | Detail |
| CX7g049123 | 7:2,405,498-2,409,545 | - | C1H7g11750 | C2H7g21271 | LOC_Os07g05620 | Os07g0150700 | CIPK23, OsCIPK23, Os-CIPK23 | Detail |
| CX7g050005 | 7:2,439,450-2,439,680 | - | - | C2H7g09771 | - | Os07g0150901 | - | Detail |
| CX7g049063 | 7:2,445,494-2,445,685 | + | - | - | - | Os07g0596950 | - | Detail |
| CX7g047271 | 7:2,451,187-2,451,423 | - | - | - | - | - | - | Detail |
| CX7g046437 | 7:2,455,154-2,455,741 | + | - | C2H7g02050 | LOC_Os07g05630 | Os07g0151100 | MIL1, mil1 | Detail |
| CX7g048161 | 7:2,459,748-2,460,655 | + | - | C2H7g18704 | - | - | - | Detail |
| CX7g046612 | 7:2,464,951-2,467,937 | + | C1H7g30095 | C2H7g08918 | LOC_Os07g05640 | Os07g0151200 | OsINT2 | Detail |
| CX7g046240 | 7:2,469,215-2,470,269 | + | C1H7g19810 | C2H7g00952 | LOC_Os07g05650 | Os07g0151300 | - | Detail |
| CX7g049717 | 7:2,503,834-2,504,998 | + | C1H7g16809 | C2H7g27358 | LOC_Os07g05690 | Os07g0151700 | - | Detail |
| CX7g050150 | 7:2,522,243-2,522,485 | - | - | - | - | Os07g0137500 | - | Detail |
| CX7g047890 | 7:2,539,275-2,540,615 | + | C1H7g23187 | C2H7g13193 | LOC_Os07g05720 | Os07g0152000 | OsTCP21, TCP21 | Detail |
| CX7g047180 | 7:2,546,689-2,550,187 | - | C1H7g21805 | C2H7g03119 | LOC_Os07g05740 | Os07g0152200 | - | Detail |