| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g01467 | 1:20,128,662-20,130,041 | + | C2H1g07845 | CX1g003139 | LOC_Os01g39790 | Os01g0579900 | - | Detail |
| C1H1g21549 | 1:20,132,981-20,135,917 | - | C2H1g09319 | CX1g000391 | LOC_Os01g39800 | Os01g0580000 | - | Detail |
| C1H1g25713 | 1:20,137,593-20,143,306 | + | C2H1g11799 | CX1g006764 | LOC_Os01g39810 | Os01g0580100 | - | Detail |
| C1H1g21126 | 1:20,153,886-20,159,904 | + | C2H1g14347 | CX1g007091 | LOC_Os01g39830 | Os01g0580200 | - | Detail |
| C1H1g08752 | 1:20,174,783-20,176,028 | + | C2H1g10202 | CX1g001278 | LOC_Os01g39860 | Os01g0580500 | ACO7, OsACO7 | Detail |
| C1H1g22394 | 1:20,179,308-20,184,928 | - | C2H1g22352 | CX1g003562 | LOC_Os01g39890 | Os01g0580800 | - | Detail |
| C1H1g15496 | 1:20,203,430-20,207,433 | + | C2H1g01027 | CX1g003223 | LOC_Os01g39960 | Os01g0581300 | OsLCYe | Detail |
| C1H1g29026 | 1:20,207,976-20,210,678 | + | C2H1g16645 | CX1g001920 | LOC_Os01g39970 | Os01g0581400 | - | Detail |
| C1H1g11792 | 1:20,221,163-20,224,476 | - | C2H1g06478 | CX1g003587 | LOC_Os01g40000 | Os01g0581900 | - | Detail |
| C1H1g19435 | 1:20,250,036-20,254,956 | - | C2H1g21784 | CX1g000670 | LOC_Os01g40050 | Os01g0582400 | - | Detail |
| C1H1g00267 | 1:20,260,116-20,263,371 | + | C2H1g22424 | CX1g004564 | - | - | - | Detail |
| C1H1g12353 | 1:20,282,301-20,288,197 | + | C2H1g13531 | CX1g007125 | LOC_Os01g40094 | Os01g0583100 | - | Detail |
| C1H1g01246 | 1:20,289,721-20,292,468 | - | C2H1g19309 | CX1g005917 | LOC_Os01g40110 | Os01g0583200 | - | Detail |
| C1H1g08692 | 1:20,303,566-20,309,033 | + | C2H1g01103 | CX1g005537 | LOC_Os01g40150 | Os01g0583700 | - | Detail |
| C1H1g16691 | 1:20,314,732-20,315,400 | + | C2H1g12153 | - | LOC_Os01g40170 | Os01g0583900 | - | Detail |
| C1H1g06868 | 1:20,321,392-20,325,171 | + | C2H1g12153 | CX1g005854 | LOC_Os01g40170 | Os01g0583900 | - | Detail |
| C1H1g22381 | 1:20,343,513-20,348,138 | - | C2H1g20455 | CX1g005795 | LOC_Os01g40200 | Os01g0584200 | - | Detail |
| C1H1g29279 | 1:20,351,809-20,352,195 | + | C2H1g06413 | CX1g002664 | LOC_Os01g40220 | - | - | Detail |
| C1H1g13029 | 1:20,357,434-20,375,761 | + | C2H1g09575 | CX1g003373 | LOC_Os01g40250 | Os01g0584800 | - | Detail |
| C1H1g07481 | 1:20,379,086-20,380,030 | + | C2H1g22147 | CX1g004043 | LOC_Os01g40260 | Os01g0584900 | OsWRKY77 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g047448 | 7:2,351,822-2,353,600 | - | C1H7g28014 | C2H7g05371 | LOC_Os07g05560 | Os07g0150000 | - | Detail |
| CX7g046128 | 7:2,354,295-2,358,931 | - | C1H7g24736 | C2H7g11076 | LOC_Os07g05570 | Os07g0150100 | - | Detail |
| CX7g046928 | 7:2,359,906-2,360,070 | - | - | - | - | Os07g0596950 | - | Detail |
| CX7g049041 | 7:2,365,079-2,367,041 | + | C1H7g04309 | C2H7g01613 | LOC_Os07g05580 | Os07g0150200 | - | Detail |
| CX7g048722 | 7:2,374,371-2,374,604 | - | - | - | - | - | - | Detail |
| CX7g049185 | 7:2,387,784-2,388,233 | + | - | C2H7g28166 | - | - | - | Detail |
| CX7g048419 | 7:2,394,886-2,400,706 | - | C1H7g20992 | C2H7g23215 | LOC_Os07g05610 | Os07g0150500 | - | Detail |
| CX7g046244 | 7:2,402,141-2,402,623 | + | C1H4g05987 | C2H7g26391 | - | - | - | Detail |
| CX7g049123 | 7:2,405,498-2,409,545 | - | C1H7g11750 | C2H7g21271 | LOC_Os07g05620 | Os07g0150700 | CIPK23, OsCIPK23, Os-CIPK23 | Detail |
| CX7g050005 | 7:2,439,450-2,439,680 | - | - | C2H7g09771 | - | Os07g0150901 | - | Detail |
| CX7g049063 | 7:2,445,494-2,445,685 | + | - | - | - | Os07g0596950 | - | Detail |
| CX7g047271 | 7:2,451,187-2,451,423 | - | - | - | - | - | - | Detail |
| CX7g046437 | 7:2,455,154-2,455,741 | + | - | C2H7g02050 | LOC_Os07g05630 | Os07g0151100 | MIL1, mil1 | Detail |
| CX7g048161 | 7:2,459,748-2,460,655 | + | - | C2H7g18704 | - | - | - | Detail |
| CX7g046612 | 7:2,464,951-2,467,937 | + | C1H7g30095 | C2H7g08918 | LOC_Os07g05640 | Os07g0151200 | OsINT2 | Detail |
| CX7g046240 | 7:2,469,215-2,470,269 | + | C1H7g19810 | C2H7g00952 | LOC_Os07g05650 | Os07g0151300 | - | Detail |
| CX7g049717 | 7:2,503,834-2,504,998 | + | C1H7g16809 | C2H7g27358 | LOC_Os07g05690 | Os07g0151700 | - | Detail |
| CX7g050150 | 7:2,522,243-2,522,485 | - | - | - | - | Os07g0137500 | - | Detail |
| CX7g047890 | 7:2,539,275-2,540,615 | + | C1H7g23187 | C2H7g13193 | LOC_Os07g05720 | Os07g0152000 | OsTCP21, TCP21 | Detail |
| CX7g047180 | 7:2,546,689-2,550,187 | - | C1H7g21805 | C2H7g03119 | LOC_Os07g05740 | Os07g0152200 | - | Detail |